Os01g0616300

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Revision as of 04:49, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0616300| Description = The start codon is not identified.| Version = NM_001050111.2 GI:297597202 GeneID:4326651| Length = 4169 bp| Definit...")
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Gene Name

Os01g0616300

Description

The start codon is not identified.

Version

NM_001050111.2 GI:297597202 GeneID:4326651

Length

4169 bp

Definition

Oryza sativa Japonica Group Os01g0616300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:26117715..26121883

Sequence Coding Region

26117844..26117854,26120848..26120863,26120955..26121116

Expression

GEO Profiles:Os01g0616300

Genome Context

<gbrowseImage1> name=NC_008394:26117715..26121883 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:26117715..26121883 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gtggcggcattgctgaatttcctaaaggtaaatgttgaagatagccctatggtcgcgaaggcggagaacgtgcggatagtcccaacattcaagatatacaaagatggggtgaaggtgaaggaaatgatctgcccaagcttgcatgttctgcgctactcagtaaggcactatgccgtatctagttcttga</cdnaseq>

Protein Sequence

<aaseq>VAALLNFLKVNVEDSPMVAKAENVRIVPTFKIYKDGVKVKEMIC PSLHVLRYSVRHYAVSSS</aaseq>

Gene Sequence

<dnaseqindica>130..140#3134..3149#3241..3402#ggtggtggttcatctcgccgcgggcgcgcacaaggtgggggcaaaagctgtgctgttcttgggggggtgtggttctatgcctgcttgcttgctcgggattggaggaggaggaggatttgaggggtgtaggtggcggcattgctgaggcggagagcgggagatccggcgatgtcggaggcggaccggatacgggtgcgcgcggcggcgctggcgctggacggcggcggcggcggcgcggtgcgggacaagccggacgcgaaggcggacgtgttcgccgatcttggctcgccggtgtccccgctgcgggcgcgggcgagcgtggcgacgtcgtcgtcgtcgtcgtccgggtcggctaagtcgccggcgccgtcgaatgccggggcgctggcgctggcgggcgggaggagccactccggcgagctgacggcggagagcacgcccccgcggctgcccgggcaccggcggtgcggatctggcccgttgatattctccggtgggagcagcggcgggagcggcggcggcggcggggaccgcgggagcacggcgagctcgccgatgactaatgcgctccccgcaggtaacatctgcccgtccgggcgcgtccccgtcgcggcggccgcgccgcccccgccgcgctcccgcccggacgtgctcggatccggcaccggcaactacggccacgggagcatcatgcgcggcggcggcggcatggcccccgcgaggagcagcattgactcctcgtcgtttcttggacacgctccgagatctccggcgaccttcccggcggcgtcgtcggcgagcagcgggagcctccaggatgtgacccgcctgggcaacgagtggtacaagaagggcaagcacgccgaggcgctgcggcactacgaccgcgccgtggccctctgccccgagagcgccgcgtgccgcgggaaccgcgccgccgcgctcgccggcctcggccgcctcgccgacgcgctccgcgactgcgaggaggcagtccgcctcgatccggccaacggccgcgcccacagccgcctcgccggcctctgcctccggtgagctctcctcctcctcccgcattgcttctttcttgcttccgatttcctccgacttcttcgtgcatggtgctgttgctttcttggatgtggatgctaagctcttttttcccgcgagcgagagcaacataaatctagcgtctttcctttttccttaagctaatctgatttcgatttaggattgctgctgctttgtgcggcatgcttgatcgtcactgttggttaatttcttttttattttttttacgcttgatgataggatgattaagaattccatctttttgcttacgcaacaattgattggtttgatttgtggttgtcgaaagctacaagcttgtgttggccatgaagtaaatgtgctgttaaagtggttccccatcacacattgctgatgaaaggggagcgtttgcttagctgtattttgtaagctttctttaggtgcattggatgtaggccacacaaagctgaaaattttgtcctagttttgttctgactcgcaagatgtctgattttacagttggaacaaccggtgtgatgtaatttttgctagaattgtagattaaaccgattggaccttgcattgtctcaggttggggatgattagcaaggcgaggaggcacttaacgcaggctgggcatctccatcaatctgatccttcggagtgggagaagctgcaggaggtggagatgcatcagggaagaagcatagatgccaggaaagtcggggattggaagagcgcgctgagggaagctgatgctgccattgctgctggagctgactcctctcggctggtaatgtcaagcataaggttgcaaggaattgttggtttgtagcaattcacactgagtttgctcttctgtgcagcttcttgcgataaggtcagaagcacttctccgtctccacaagttggaggaggctgactcgactcttgcaagtttgctgaaattggacagcgtgttgctgtatcggatgggagccaacccgtcaggcatgctagctgagtcatatgtctctattgtccgagcccaagtcgacatggcattgggaaggtgtgattctctaaccctagaataatgctcaattttccacattgcggttaaaatagattagcatgaatttgttattctgtattctacaggtttgatgctgctgtggaggcagctgataatgctagatttattgatcctggaaatgcggaagttggaatgattctaaataatgtcaaattagttgcaaaggctcgagcccaaggaaatgagctctataaagctgccaagttttctgatgcatctatagcatatagtgaagggctcaaatatgagccctcaaatccagtgctctattgcaatcgagcagcatgctgggggaagctagagcggtgggaaaaggctgttgatgactgtaacgaagcattaagaatacaacctaattacacaaaggcgcttttaaggcgagcttcatcctatgccaaggtaagcagcaatcatatgcattaaatgtttatttttgatagtggaattgagtaattggatattgtttccactctatgtacattatgttgaccttgttaactattatttagctcgagcgttgggctgattgtgtgcgggactatgaggtgcttcataaagagcttcctgctgatacagaggttgcagaagcactgttccatgctcaagttgcattgaagacaactcgtggtgaggatgtatcgaatatgaaatttggaggagaggttgagatggtaaccagtgtagaacaactccgtgctgccataggatcaccaggtgtgttattctctactagttcttttttttcccttgatctcataccctgaaattaactcattggtgctgctctggtagcatcctgaacaatccgaaatactgccttctttatattcttgaaacatgtgttttactaggtttatcataccagacttgcctattttgcaattgactgactattgaacaatttgctatatcttcaggggtgtctgttgtttacttcatgtcaatcatgaatcagcagtgcacactaattacaccttcggtgaactccctttgcagcgaatgcccctcgctgaatttcctaaaggtgagacacttgacatgtctccaatcaaatacatccaacaagtgcttataaatgacactaacaaatctgcattgtgtgtgcaaaacaacaggtaaatgttgaagatagccctatggtcgcgaaggcggagaacgtgcggatagtcccaacattcaagatatacaaagatggggtgaaggtgaaggaaatgatctgcccaagcttgcatgttctgcgctactcagtaaggcactatgccgtatctagttcttgagaagcagctggtaccgaaaaccccgatttcccgatttcattgatgcatagtgctcccctttcccccctatagccttttactgtcaaaacttgagatgatgttgtcagcctccaccagtcccacctcatttcatcagctgcacaataatttccctgacgagcatgagcataatgagctaaaattggtatatgtggaagagcctccccaattttccccccttgccccccattccattccccatctgttgttactccttttttaccgttcatatgccgaccccattcaattctttcaccttctgggctctttcacctcttgtatttgatacattttgctttaccttatagtccaatagaaccagccaaccctccttctcaagaagggcaagtttgtaatgttgtttagattagtagcatattatcatagaggagaggagggagggggagagggagttagagagggatgatggttgagattttcattacatgtaaataccatatagcaaaaacatcagaaatccaattgaaggattgcttccctggagaaatggtggtatcaaaaaaattttggaggttggaggaggttagtacaggagaggctagctgtcattttagcgaatcaagagagcttgttaattggtgcaggatgggtttaggggttggtgttaaaagaaagattggtgtcattttgctgcttctgctgctggtttgtggtgctgatacataatgctaccatttccatgaataaaacaatccaacattcttttt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0616300, RefSeq:Os01g0616300