Os01g0619800

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Revision as of 04:49, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0619800| Description = Glycoside hydrolase, family 18 protein| Version = NM_001050131.1 GI:115438632 GeneID:4326620| Length = 4920 bp| Def...")
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Gene Name

Os01g0619800

Description

Glycoside hydrolase, family 18 protein

Version

NM_001050131.1 GI:115438632 GeneID:4326620

Length

4920 bp

Definition

Oryza sativa Japonica Group Os01g0619800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:26348238..26353157

Sequence Coding Region

26350419..26350595,26351994..26352348,26352658..26352908

Expression

GEO Profiles:Os01g0619800

Genome Context

<gbrowseImage1> name=NC_008394:26348238..26353157 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:26348238..26353157 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaatgcaggtaagtacctatattgttgtatgtccagatattgttatagttataattgccagtttgtcatctggctgtcagtgaatagggataaggggtatgatggtgttgtgctggaatcctggtcaagatgggctgtttatggagtgttagatgattcagagttacgcaacagggcacttcaatttgtaaagcatctggggaaaactttgcctttgaccagttcaaatttaagtacgcatcaccatttgaagttaatttatgttgtccctgctccacgaatgaaagagctcaacaatcaagagttcagaccagaagatcttctgcagttggctgactcagtagatggtttttctcttatgacatatgacttctcagggccacaaaaccctggccccagtgcacctttgagttggatacagtattctttaaaaacacttctcgcagcgaaggggtctgcttctcatgggcattctcacatgatattccttggcatcaatttttatgggaatgactttctcctttctaaaggtgatggtggtaatgctatcactggaagggatttcatttatttacttgataagtacaagccatctttgcagtgggatgagaaaagttcagagcattttttcgtctattcagataaaggtttgagacatgctgtattctacccaacgctgatgtccctttctttacgtttggatgaagctcaagattggggaacagggctttcaatttgggaaattgggcaaggtttggactattttttcgatgttctttag</cdnaseq>

Protein Sequence

<aaseq>MNAGKYLYCCMSRYCYSYNCQFVIWLSVNRDKGYDGVVLESWSR WAVYGVLDDSELRNRALQFVKHLGKTLPLTSSNLSTHHHLKLIYVVPAPRMKELNNQE FRPEDLLQLADSVDGFSLMTYDFSGPQNPGPSAPLSWIQYSLKTLLAAKGSASHGHSH MIFLGINFYGNDFLLSKGDGGNAITGRDFIYLLDKYKPSLQWDEKSSEHFFVYSDKGL RHAVFYPTLMSLSLRLDEAQDWGTGLSIWEIGQGLDYFFDVL</aaseq>

Gene Sequence

<dnaseqindica>2182..2358#3757..4111#4421..4671#accggctccaccggaccagagagattcgccacccgccggagaaatgccgccacggaggcgagatcgccggaggccccgcgacccctcaccggagacctcccgtgcgagcacttcagccgcctcctcctcgtcggggtcccgcttccgtcccgccctcctcgcgcctctcctcctgctgcttctgctcctcatcctcgccgcgcttcacttctccggccgtctctcccttccccggcctcaggcgccgccgcagaggacacgcctctccgtccacgagcgcgggctcgtcaggcgcgacgtctccgccagcgagatcctcgccgtaagggcctaatccggtaacccccctctcgagccgattcgttccagctgcatcactgacgagctgcgtttatctggaccgcctggtgctgtcgcccctcgctgctgcaggagcacgctacggtctcggagaaccggtcgcgccgccacttccgcaaccctgtcctcgcctatgtgaccccctggtgcgtcatttgtacatttagtttaggtgtactcatttttaaatttgctttccacgatataggttttaacagtagtgctttcgaacttgaatcatgaatgaacgagtgaatggtgctcaaatgcttatttagcccgtgttaatagtgatttctctcaggctatatatatacacctaaaagaaaaatcgaccatcaggttaagatggtggctcgcagcattcaactaagtagagaaaaatccccccgaacgcagcgcgtgaccaggaacactcaatctcatcggatagaagagttgaacgtgacatcttgaaacctctatttactattgagagctcgaaatagtttgtgcagataataggaaattagacctgataaggcattatcttatgaggatatgtacgctgtaagctgttatagagtaagtagtggagaacgatgctgtagcccagtggtagggagctactaggtgctctcttttgcttgcgttcgagtcccctcaatgccggttttctcaccatttcttctctcttaataattgatgctaagttccttattaatatcgcatccttcagccttgtttctccacctctttgtcttgtctctgcgcttgtctgttctttcgaaacttttactcttatacaaaggtgtgcaatccttttgcacattccctaaaaaatgtaagtggtgactaggtctgcaacatgtttgcatgttactttttgatattcataccgttttaaccaaaaaatagagagttgctatggatactttgaagaagtaaaatagttgattgcatcaacataattaatatcacataattcctactgaggaaagggtgagtgttggtagctgtggcaagatgtattatctaaatatataaaatgtgaatgttatgattttgaaaattatactcttgtaatgataacagatctaattctagctatagatgaaatggctaggacggatagttggcttcaaatcatgagtcttttggattcgttgttgccataaagctcaatttcctaatatttttctacttcaccttttttttcccatctatatgcatattgtacaatcaaatgctctgtgatgcaggaactctaaaggttatgacatggcaaagttgtacagcacaaagtttactcacatatcacctgtgtggtatgacttgaagaggtttgtggctaacttttcatggtacaatttccaattatcatgtttcctcaagctttttgtctaatgtgcagcgatgggaataagctagttttggaaggacaacataattttgatgccaaatgggtctccgaacttcaaagtaatggatctttggtaagccatttatttttcttccttcctcttcctttatgtggagttcgctattattatgttggtgtaggacatattacactactacagttatagttacgaagtatgatattggaaatttttatcacctcaagattatgcgtagatgtgtatagtataaccaaatagtataaataacaattttctattgtgtacttggtttatgagtgaaaaatacattaaaatatattcttttaaaaaaattatatgcctgttctttaggtattgcctagagttgtcttagaagcattccctggggttgtactaatgaaaaagaagctaagggacaaagctattgatctaattgtcaatgaatgcaggtaagtacctatattgttgtatgtccagatattgttatagttataattgccagtttgtcatctggctgtcagtgaatagggataaggggtatgatggtgttgtgctggaatcctggtcaagatgggctgtttatggagtgttagatgattcagagttacgcaacagggtaagtcatttgccattatcaatcatcaatttccttattattctaataaagagttttccacgatcatgcttggcaatagatgttagcatgtgcacttgcaaagttttgttatttactacctccgtcccaaaatgttgctacctagtactacgaatctggacatgcccctgtccagattcacagtaccgggtaatgtcacatccactcctaggcagcaacattttgggacagagttagtatgtggtttgaattctttatcatggcacggagtgacatgccaaacccaacaggcaacatcagcttctgcagcaaaccctaaccacttgaaaattgatgacagaaccaactcagggaagatgatttttgtaacaaatatctcatcgacagttaaaagtcaataataccgaataataaagaacggacataatacatcataaaagtagcatgtgacaggtgattttggtggacaaaatatattggtttagtgattaagtatagagtataataactgtaacattcttacttccttatagcccccccccccccaacccacacacacacacacctcttttttgaaaaatagcattattgacttgaacggttttcataattggcatatgacaactaaatatgttagaaactttgatggtactatgtactatgaaactaaatatgcttttagaatgcattttcgaaacaacaattggagtactatgtacatctgtacaaagtcactctaccatttcaagttgcactcgtaccccattttccctacatacccatccaaagtaactgaaatttgcatttgcaagataaaactagcggctgtgcatgggttttgtagtttttttaaaaaataatttcatcatgtacacctctgtgtgtgtgaaacctattcagcctgtacgctcagtccatggcaacaagggcagaacaacatgggcaaaggcccaatttcctaacattctgggtttgattggtttgctatgtgggaaaggcctgatacactaaatccgttagatagttacattattaatcagccgatcttcgagtgaaaataaaatcttttttttttgtgtgtgtgtgtgtgttggggaggggggggtggcaagcttctgctcatttcccactctctctgccactgcctgagtttaagaataaacccttcttaaatatggtatcaagggagcactgcagttatttcttgattactttatgacaaaaaatcttagcagaagaaagaaaagggccaaaaggggtgtgctgtggtggggccgtgggggtgactagtaactgcattctttttttgcagcatctctacaatggttgtttagttgcacctcatattatccttttttttgtggtaacacctcataatgtttttgttgtatgctgcaggcacttcaatttgtaaagcatctggggaaaactttgcctttgaccagttcaaatttaagtacgcatcaccatttgaagttaatttatgttgtccctgctccacgaatgaaagagctcaacaatcaagagttcagaccagaagatcttctgcagttggctgactcagtagatggtttttctcttatgacatatgacttctcagggccacaaaaccctggccccagtgcacctttgagttggatacagtattctttaaaaacacttctcgcagcgaaggggtctgcttctcatgggcattctcacatgatattccttggcatcaatttttatgggaatgactttctcctttctaaaggtatatgcgtattcctcatctttcacatcctcggtgctgaaacgtagaataacctttttgtgtagctgtgtgaatcagaaaattcacccatgtttcgtttacaccgtgttgcttgaatttcacttgactactgacacatatcatgacatcatactgggtaaagtccaatcaggtcatgatttactacaccattggtagcatgtggtacattgtttaattactcgatttatcatgtgattgatgcacacttggaatttatctcgaacctgcatttcagactatatatttctcaggaatgtttgtttacaggtgatggtggtaatgctatcactggaagggatttcatttatttacttgataagtacaagccatctttgcagtgggatgagaaaagttcagagcattttttcgtctattcagataaaggtttgagacatgctgtattctacccaacgctgatgtccctttctttacgtttggatgaagctcaagattggggaacagggctttcaatttgggaaattgggcaaggtttggactattttttcgatgttctttaggaatatctcacgtgtgttctttttattttgggagcaatgtcagttagaccacaactattgcaaagtattacaaggtcacccgtggacattatttgtttagcatcaaaactgtcacttcataactgattacatccttctgggaaatgtttccaaacaccaaatttccccttcagtgtactgctgcaaaatttagattaagtgatatgagatttttcatcttctttacagaataaacatggttgcttgttt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0619800, RefSeq:Os01g0619800