Os01g0620100

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Revision as of 04:49, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0620100| Description = WD40-like domain containing protein| Version = NM_001050132.1 GI:115438634 GeneID:4326622| Length = 5141 bp| Defini...")
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Gene Name

Os01g0620100

Description

WD40-like domain containing protein

Version

NM_001050132.1 GI:115438634 GeneID:4326622

Length

5141 bp

Definition

Oryza sativa Japonica Group Os01g0620100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:26360617..26365757

Sequence Coding Region

26360771..26360908,26361089..26361215,26361980..26362092,26362851..26363006,26363174..26363251
,26363704..26363804,26364827..26364938,26365478..26365627

Expression

GEO Profiles:Os01g0620100

Genome Context

<gbrowseImage1> name=NC_008394:26360617..26365757 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:26360617..26365757 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggagcggcaggtggcggagctgggggccggcgcggcgtgcgtaggctggaaccactgcggccgccgcctcgccgccggcgccgtcgacggcttcgtctccgtctacgactcccagtcccagccgtcgccttcctccaagtggcaggcccacaagcatgcgatcctgaatatcgtgtggcttcctccggactatggggatgctatagcttgtgtttgtgctgatgggacgctatctttgtgggaggaggtcagtgaagatgatcaacttccaacctggaggaaatgtaaagtatttgagagtggcaattctcacatactacacgtacagtttggattacaactgtctagtctaaaaatggttactgcatactcagatggccaagtgaaggtttatgagctcttggactcgttggaattagacaagtggcagcttcaggcggagttccagaacattacagatcctgtttcccgatctgggaagccagcatgtacttctgcatcaattgcatggagtccaagaagaggtgaaagtcagcaggctagttttgctattggtttcaattcagactctccaaatttcaactcttgtaagatttgggagttcgaagaagctcaccagcgttggctcccccttgttgagcttggctcacctcaggataagggggatatagtgcatgctgtagcatgggctcctaacatcggcagaccatatgagatcatagcagttgcgacatgtaaaggaatcgcaatctggcatataggcttaagcgctgaatctgacggcagcctgtcaactgagaatgtggctgtactttctggccatgatggggaggtcctgcaactggaatgggacatgggcggtatgacactcgcatcgaccggaggtgatggcatggttaagctatggcaggctaacctgaatggagtttggcatgaacaagctgtgcttgactgcaatgtgtctcactag</cdnaseq>

Protein Sequence

<aaseq>MAERQVAELGAGAACVGWNHCGRRLAAGAVDGFVSVYDSQSQPS PSSKWQAHKHAILNIVWLPPDYGDAIACVCADGTLSLWEEVSEDDQLPTWRKCKVFES GNSHILHVQFGLQLSSLKMVTAYSDGQVKVYELLDSLELDKWQLQAEFQNITDPVSRS GKPACTSASIAWSPRRGESQQASFAIGFNSDSPNFNSCKIWEFEEAHQRWLPLVELGS PQDKGDIVHAVAWAPNIGRPYEIIAVATCKGIAIWHIGLSAESDGSLSTENVAVLSGH DGEVLQLEWDMGGMTLASTGGDGMVKLWQANLNGVWHEQAVLDCNVSH</aaseq>

Gene Sequence

<dnaseqindica>4850..4987#4543..4669#3666..3778#2752..2907#2507..2584#1954..2054#820..931#131..280#agtgtccgtacacccaacccacctgggccgccgcgtctcgttctctcctccaacaaacccacctccgagcaggctgcgtgctctcgccgccgccgccaccgtaggcgagggcatctcatctcagggaggaatggcggagcggcaggtggcggagctgggggccggcgcggcgtgcgtaggctggaaccactgcggccgccgcctcgccgccggcgccgtcgacggcttcgtctccgtctacgactcccagtcccagccgtcgccttcctccaagtggcaggtcaggtttaccaccgaaaccagaatcctccccccgccttaaaccctgagtatcttcaaccccaccaggaacctgcccctttctcgctcttgagcttcgaagcgtagttggtattggtgcaaagcttagggctttttgttagtgtatcaggattctgcttgtacgcatacctgcataggaaaattcgtcatggatgtgtatttagtactagtaaataatgcagggctcttgttctttagtgcagaaaattagtctactttcaaccaaacacaagatataccaggacattttagtgtgtttgtattattagtgtgccaaactagaacagtaaatacatgtgtattgctagagtcgtgaggttgaattggtgattgttctggaaattatcaggagatgttgtactgaaggaaatggaacggtaaatgattgttgctgtgttatccattgcatgtttctgtttgatatctcttgtgtttgctctgtggtttctgttaccacatccatttgtttgacctgggttcgttatggtgttgagtcaggcccacaagcatgcgatcctgaatatcgtgtggcttcctccggactatggggatgctatagcttgtgtttgtgctgatgggacgctatctttgtgggaggaggtcagtgaaggttagttgttcttatgccttttaagttgtgttttggtctactttgcggtggagagagagtttccttttcttagttctttatattgaaaaatctgaacaataacttatccaagtgatgttaaaggccacatgggaagttgggaaccattgatttttatgtacttactgttacagtctatatagctaactcaacttgcctttggccatcaaaatgtatgtggctgatacagagtagaatattgttattgttcctgctacttccatggttttaattttgtttgtacttgggtattggatttcaagcacttttcttatgatattttgatttatcatgtacatcgtgacctcttttttctagaatattgcagattctcttttgttttgttttgaaatattaggttctcccaacctatggaaatggccattaaaagttttgaaatattttgtaacatagcattcattatcatctacctttccacaaaattttaacttgaagacacttcttgtatgaggagaaacaaagaaaatgtcactagtgagtgaaatgatgtggttttagtagttcagagggatgaagcaagacttagaacaaaaaaaaggtttaggtgtttaagtactccaacggggaaactttcaggggagtcagaatggacagtttcttttaatgatatgttatttgtagtgcaaccaacaatatatctaaaccagtatagcgacatcaagttctcctaaagctctagtgagtttacctgaaattcacttaatgcacatgttcttatgaaaattcaaatgagaaatattaaatggtttgtgtaaaatacttatttgattaacaaagtaataaaataaatgttgctaaattctcttaatggtacatatttcagttaaacatatactatatttatcacaactcttttgttattttctttcagaaaagaaaacgttttatttcatgctgtactgcattccttgttattttctttatatggaaatggcagtcaaactcaaattttcctttgacagatgatcaacttccaacctggaggaaatgtaaagtatttgagagtggcaattctcacatactacacgtacagtttggattacaactgtctagtctaaaaatggtaagctctaacatctgaatttgtgtttgcaactccaattcacacctttttcatgccaatagaaccattttttatttttctttatttgggagaaatggcattcattataaatcacgaaatttctgtagatggttcagacttgctgaaagtactctctgcaccttgtacatcagattaaattacagtagatgaaggcaatgccacaatggagctatgttaatgagcatatgaaagtttgttaagcagcacaaaagtctagaaatgttaactagaaacaaccaatagtgactagccagcaacaactcatatttatgcaattaaatgttattttgctttgactgttctgcaggttgtctgtgtatcgaaacttttgtattggtgtccacatatgatatgttgtgtgtgtacctcattcgttggtagtaagtagtaacttctgttggtctccacaggttactgcatactcagatggccaagtgaaggtttatgagctcttggactcgttggaattagacaagtggcagcttcaggtttatctaacttctgttcacatttaccaatgttctcaatcatttagtttggttcctatatattccttgctaatctaaactagcaaacccatttcttccattgaatagtgctatagtcatctgatctgtttaacaatagcaattactaagtaataacaacatttcaggcggagttccagaacattacagatcctgtttcccgatctgggaagccagcatgtacttctgcatcaattgcatggagtccaagaagaggtgaaagtcagcaggctagttttgctattggtttcaattcagactctccaaatttcaactcttgtaaggtacgtggaatttagtgtagtactatttttatttcattattgtctgcataaattacagtgactccattccagcaggtagcagcaggacagaacttattatttcctatcaacatcgttcttctgtagtacatctgtttatgcatactaaataaagcataaagtaattgttcttttgcatagagatcttccatgcattaaattttctttcatatgctcaaatttaccttctatatttactacttactagcctagagcccgtgcattgcagcggaaaacaaattgagtttctagcttattaaatcaattaataagcacttatttagtctaagtaatactatgatttttcttattgaacaagtaataggtgattttgaaatttggggggagctaatagtgaaatggaggacttgttaaaaggtggtgtaatagtatagattgtgggacccagatgttagtggtaggtgtggtgtgggaatggacaccaccactactaacattttaagtaaaatagagaatagataaccaagaagtagaaaagcaaaccactattttatctcttctgcatttggaggaaataaatagtagtagtaattcgggagatcattgtaggtttaaatctgtaaaaagtattactgaaaccttgcatgaagtagatttggttttgtatttagtgagtaatcagtttttcttttgcctagttcatgagctgtcgtctgtttctgacactattctaataaaataatgaaaatggtgaacagatttgggagttcgaagaagctcaccagcgttggctcccccttgttgagcttggctcacctcaggataagggggatatagtgcatgctgtagcatgggctcctaacatcggcaggttgttcctttcttcagcaagcataacagttgacatgccttaatttttcaatatgtattgtgttttgaatgttttgtgttcactgctgatattagcatcatttagttgcttaacttctataacaaataactggtttcttaagatgaaattgtcattggatgagggtgattgacttatgcttgagccacttatggtgttcattgttgtttctgtcgtgtaaaaatgttgcagctcgtagcaactatggaatcaggcaagtaaattttgacatgttcaaatacacactatgtagaagattattagtcgaatacatttcctgttcttttgccataatttagatatattatgttgtctgacacttgctgcgtttggtttagtattcaacattgtgtcctctgcctctataataatgtagcaatctgggagacaagtaaaatgatatattttggaattttgagctgttgagaatgaaaatgaaaatggtgaacagatttgggggttcgaataagctatagttagtatgtacatgatggcacgtggaacatataaacatagtcagcatgcaaaactaaaggctaattgatggttgggtgaccttgggctgggcttcgaaaaagtatggcaattggtccatcatgaccatgcttataagagccctggtagagcatcatattcagatagtgtttcaatctcccatgggcataggggtttgtttttaccatcctaatatgctctgctaattattttcacataatgtgtttcagaccatatgagatcatagcagttgcgacatgtaaaggaatcgcaatctggcatataggcttaagcgctgaatctgacggcagcctgtcaactgagaatgtggctgtactttctggccatgatggggaggtacaataaacttgtcttgtctttgtgcagtagttattggctgtattacatgggctttctggagaatgtcttttgttcatgaggctccttgagaaattacagtatagttgaagaggactggtcctagtgtaatttttactgattattcggtacacatgcttgtttttcacaccttactaggtcctgcaactggaatgggacatgggcggtatgacactcgcatcgaccggaggtgatggcatggttaagctatggcaggctaacctgaatggagtttggcatgaacaagctgtgcttgactgcaatgtgtctcactagggttgcatatcttttttttctggttggaactggggccttgggggattcccagctcccaagttgtgcaaacaagcatttaagtggattgcttatcaatgttaaagaattctgcaagatctctttcaattatactgtcgtgcacgtggttggtttt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0620100, RefSeq:Os01g0620100