Os01g0626100

From RiceWiki
Revision as of 04:49, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0626100| Description = Adaptin, N-terminal domain containing protein| Version = NM_001050160.1 GI:115438690 GeneID:4326687| Length = 3040 b...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0626100

Description

Adaptin, N-terminal domain containing protein

Version

NM_001050160.1 GI:115438690 GeneID:4326687

Length

3040 bp

Definition

Oryza sativa Japonica Group Os01g0626100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:26651589..26654628

Sequence Coding Region

26651650..26651705,26651811..26652375

Expression

GEO Profiles:Os01g0626100

Genome Context

<gbrowseImage1> name=NC_008394:26651589..26654628 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:26651589..26654628 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctccgacggcgcccacggcggcgaagtccgcctccccgtcccagccatccgggaagagcgaggtggcggatctgaagcagcagctgcggcagctggcggggagccgcgcgcccgacgccgacgaccagcggagggacgtcttcaagcgggtgatctcctgcatgacggccggcatcgacgtgtcggcggcgttcggggagatggtgctctgctccgccacctccgacgtcgtgctgaagaagatgtgctacctctacgtcggcgtccacgcgcgcaaccacccggacctcgcgctcctcaccatcaacttcctccagcgcgactgccacgaccaggaccccaccatacgcggcctggcactccgcagcctctgctccctccgcgttcccaacctcgtcgagtaccttgtctcgccgctcgccactgggctcaaggaccccagtgcttacgtccggatgatcgctgctgttggtgctgcgaagctgtatcacatatctgccaccgcctgccttgatgctgacttgcctgcggcgctcaaagcgcttatgctctctgatcctgatgcacaggtgagttgccattccacaaacaatgttgtgattatcatgcaactatga</cdnaseq>

Protein Sequence

<aaseq>MAPTAPTAAKSASPSQPSGKSEVADLKQQLRQLAGSRAPDADDQ RRDVFKRVISCMTAGIDVSAAFGEMVLCSATSDVVLKKMCYLYVGVHARNHPDLALLT INFLQRDCHDQDPTIRGLALRSLCSLRVPNLVEYLVSPLATGLKDPSAYVRMIAAVGA AKLYHISATACLDADLPAALKALMLSDPDAQVSCHSTNNVVIIMQL</aaseq>

Gene Sequence

<dnaseqindica>62..117#223..787#gtcttcttcacgcgcacggcgcacccagatccaagcgtccatcgccgcggccgcatccgccatggctccgacggcgcccacggcggcgaagtccgcctccccgtcccagccatccgggtgcgccaccctcctgctccttcactcctgacggcatctctttcatccccaacctgaaccctaaactgaccaattttggggggacttgtgagttgaggtgtgcaggaagagcgaggtggcggatctgaagcagcagctgcggcagctggcggggagccgcgcgcccgacgccgacgaccagcggagggacgtcttcaagcgggtgatctcctgcatgacggccggcatcgacgtgtcggcggcgttcggggagatggtgctctgctccgccacctccgacgtcgtgctgaagaagatgtgctacctctacgtcggcgtccacgcgcgcaaccacccggacctcgcgctcctcaccatcaacttcctccagcgcgactgccacgaccaggaccccaccatacgcggcctggcactccgcagcctctgctccctccgcgttcccaacctcgtcgagtaccttgtctcgccgctcgccactgggctcaaggaccccagtgcttacgtccggatgatcgctgctgttggtgctgcgaagctgtatcacatatctgccaccgcctgccttgatgctgacttgcctgcggcgctcaaagcgcttatgctctctgatcctgatgcacaggtgagttgccattccacaaacaatgttgtgattatcatgcaactatgatgctgctacctgttgcaatgattcattatctgtagattatagtgctcacaataccgtttaattaccaccgaaaagtctatgacatctgtagtgctgatttaaagttggaactggtagacaatcagtaaggatttaatacttcttgcatgccaatgtgagctgtaacttgaaatttggttcagcatgcagccggccaatcgttttctactttgcagtttgtctaatagaacaggtggagggaaatgcctaatgaagctgcatgctagtgatattaatcttcattgataatagtttgattttgatctgattgatcatataggttgttggtaattacttggaccgacatattttgtgatggaaagtatagtgacttaacattgctgaagtagcttgaagccttgaagtgaaaccacaatgctagtcaagacaaaactactgaacctagatacaccctattcttttaaggttacataatggaagaaatcaactctgaaccaatctgatcatgcatctatgtgggtttgatttctgggaaggatttggaggctattaggtgaattcatatatttttgctcaaaacattcttgttttggcttaggcttttaagatttcagccacaagttgaagggtagagtcataattttcttctggttattagttctatcatgatttttggcttttaaaagtccctgtggtaaagctgtctgttacttaaggcttagaatttttggtttataagccagcgaattagctgaagcaagcagggctcaacatatgaatgtggttctgggaaaatagataccatggtactcaaatataaccttgcaagaataagagtctgaacacaggtaaaaatggtactgagaggatagataccttggctgcctttattggttctgtttctaactcgctatccccattttctaccgctcttgtccatttttcattgttgcatgctgttgccaccttgagagtccctgcctcaccatgccgccacacctttgaagtgtacttttgatattctgtttgtctgctacattttacatgcgtatgatttataaattttggaacaattgtttcagtatttgccaacataaattcctacaatactattgatgtatatttctattatgtgcttaacatttctggaatgttcatgcataatatccacatgtattcatgaccatattcatattaaatctatctgcatgtaatttgtatttgatattatacgaatccatatcccaaactgaaagaaacattatataggatgtgaaaaacccatacatggccacattttacaagattgcagccctacattcagtattgttcctgactgcctgtataagatgctattcttctatacaccttttgaataaagttacacaactcttaatattattcagatgtgtacaacttaagaaattggtcacacactttaagtctcaaatgattgtaccttgtgagagtagtgtcagtcgtctcagccgtatgctgttttatatctaacaaatactccgcctttccactccaaatgcacgattggctatggattttctcacatgaacatataggagaaatactaaacactgcaatttgtttttggaacaacacaggagagctgcatgttatttcattaaggaggaaaaaacaaagtacacatggtcaagaaggaaatcctgacctgaatatacatattcacacacactaaacactgcagtttgtgcaattattctagattcaacagcattttgcttgtacccttgggttcttgttttctcacaatgccttcaacagtataatacaacataataggtttacatagtgttcactagccaaactagatagggtacttcagagatagtatttaccaagaattatattgcagttttttagttatatttaatgtttaaagacatctcaattttgccatttatgatttatcactagaacatattgtaattctttttgttccacgagtaatattggtgttctacccaaagtaattgaaaccacagtaggtgttgaactgcccaggtgtttggcttgctagtttgctggccaacagctggttcactatttaaatcggtcattggtggtcaagtgagtggtaaactcatgttatatataatactaataggagagtagccaggagcccaggacaataagccatggttggcaacttccacagctcctaggtggtcggacctcttggtatactagcatatttgtccatgcattatctcaattctc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0626100, RefSeq:Os01g0626100