Os01g0627400

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Revision as of 04:49, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0627400| Description = Similar to Cytochrome P450 monooxygenase CYP72A5 (Fragment)| Version = NM_001050166.1 GI:115438702 GeneID:4326694| L...")
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Gene Name

Os01g0627400

Description

Similar to Cytochrome P450 monooxygenase CYP72A5 (Fragment)

Version

NM_001050166.1 GI:115438702 GeneID:4326694

Length

3135 bp

Definition

Oryza sativa Japonica Group Os01g0627400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:26697615..26700749

Sequence Coding Region

26697659..26698031,26698234..26698457,26698741..26698988,26699644..26700031,26700127..26700558

Expression

GEO Profiles:Os01g0627400

Genome Context

<gbrowseImage1> name=NC_008394:26697615..26700749 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:26697615..26700749 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagagagaaaaagaagcaatgggcatcggcatcggcatcggcatcggcatcggcatcggcaccggcaccggcgcggcgctaccattcggcgaggcctcgccgtggagcctgctcggcggcgcggtggccgcgctgctgctggtctgggccgcgcagatgctggagtgggcctggctggccccgcggcggatggaacgggccctcagggcccagggcctgaggggcacccagtaccgcttcctccatggcgacctcaccgaggacctgcggctcgtcacggcggcccgctccaagcccgtgcccatggaccggccccacgacttcatcccgcgcgtcgcgcctctgcttcaccgtgccttggaggaacacggtagggtttcttttacatggttcgggccaatgccaagggttacaatcactgatccggacttggtccgtgaagttctatcgaacaaatttggtcactttgagaagacaaagctggccactcggctttctaagttactcgttggtgggcttgtgatccttcatggtgaaaaatgggtcaaacataggaggattatgaatccagcctttcatgcagaaaagctaaagcggatgttgccagcattctccgcatcttgtagcgaactaattggcagatgggagaatgcggttgctgcttctgttggaaaagccgagctggacatttggccagattttcagaatttatcaggagatgttatttcaagagcagcatttggtgtcagacaccacgaaggcagacaaattttcctacttcaggccgagcaagctgaacgccttgttcaatctttccggagtaattacatcccaggcttatctcttttaccgacagaaaacaacagaaggatgaaggcaatagacagagagataaagagtattctaagaggcataatagaaaagaggcagaaggccacgaagaacggcgaagccagcaaggacgatctgctcggcttgctcctacaatccaacatggattattacagcgacgaggacggcaaatccagcaaggggatgaccgtcgaggagatcatcgacgaatgcaagctgttctacttcgccgggatggagacaaccgccgtgttgctcacctggacaatggttgccctgagcatgcacccggagtggcaggatcgcgccagggaggagattctgcaggtctttgggcgaaacaaacctgatatcaatggcgttagccgcctgaaagtcgtgaccatggtgctgcacgaggtgctgcgcctgtacccgccggtggtgatgatgaaccgccgcacgtacaaggagatcgagctcggcggcgtcaggtacccggcgggcgtgatgctgtcgctgcccgtgctgttcatccaccgcgacgccgccgcgtgggggcacgacgccggcgagttcgacccggggaggttcgcggagggcgtggccagggcgtgcaaggaccccggcgccggcgcgttcttcccgttcagctggggcccgcgcatctgcatcggccagaacttcgcgctgctggaggccaaggtggcgctcggcatgatcctgcagcgcttcgcgttcgagctgtcgccggcgtacgcgcacgcgccctacaccgtgctgacgctgcacccgcagcacggcgttccggttaggctgcgccgactctga</cdnaseq>

Protein Sequence

<aaseq>MQREKEAMGIGIGIGIGIGIGTGTGAALPFGEASPWSLLGGAVA ALLLVWAAQMLEWAWLAPRRMERALRAQGLRGTQYRFLHGDLTEDLRLVTAARSKPVP MDRPHDFIPRVAPLLHRALEEHGRVSFTWFGPMPRVTITDPDLVREVLSNKFGHFEKT KLATRLSKLLVGGLVILHGEKWVKHRRIMNPAFHAEKLKRMLPAFSASCSELIGRWEN AVAASVGKAELDIWPDFQNLSGDVISRAAFGVRHHEGRQIFLLQAEQAERLVQSFRSN YIPGLSLLPTENNRRMKAIDREIKSILRGIIEKRQKATKNGEASKDDLLGLLLQSNMD YYSDEDGKSSKGMTVEEIIDECKLFYFAGMETTAVLLTWTMVALSMHPEWQDRAREEI LQVFGRNKPDINGVSRLKVVTMVLHEVLRLYPPVVMMNRRTYKEIELGGVRYPAGVML SLPVLFIHRDAAAWGHDAGEFDPGRFAEGVARACKDPGAGAFFPFSWGPRICIGQNFA LLEAKVALGMILQRFAFELSPAYAHAPYTVLTLHPQHGVPVRLRRL</aaseq>

Gene Sequence

<dnaseqindica>45..417#620..843#1127..1374#2030..2417#2513..2944#ctccgtcccgtttgcttcaacaacacatttgctttgctcggtacatgcagagagaaaaagaagcaatgggcatcggcatcggcatcggcatcggcatcggcatcggcaccggcaccggcgcggcgctaccattcggcgaggcctcgccgtggagcctgctcggcggcgcggtggccgcgctgctgctggtctgggccgcgcagatgctggagtgggcctggctggccccgcggcggatggaacgggccctcagggcccagggcctgaggggcacccagtaccgcttcctccatggcgacctcaccgaggacctgcggctcgtcacggcggcccgctccaagcccgtgcccatggaccggccccacgacttcatcccgcgcgtcgcgcctctgcttcaccgtgccttggaggaacacggtactgtactcgctctacttctgcaatatttgttttcttttgttttgtttttcggcgaacacatccaagatttgattgttgttatgcaactttaagttcatcgtacagttgatctagaaatgccactatttgatcatcaattatcttgtttttttcagtgtctttgtaccatgttctgatctctgtgcgcatgaaaatacaggtagggtttcttttacatggttcgggccaatgccaagggttacaatcactgatccggacttggtccgtgaagttctatcgaacaaatttggtcactttgagaagacaaagctggccactcggctttctaagttactcgttggtgggcttgtgatccttcatggtgaaaaatgggtcaaacataggaggattatgaatccagcctttcatgcagaaaagctaaaggtattattactaggatttactgaaagaattcgtgaatatgagacctgactactgtatttagtattcaggatttcatgtgtaagaattatcatttagtaagacgatcgtttagcctagctatttgatcagaagttaaattaatctgatgaatgcctgcattctttgcagtcactaaacaggtcgaactaaacatattagaactggagatcaatttggttacacttactttcctggtatttttcccctttccctgacttatatattcccttggaactaattgcagcggatgttgccagcattctccgcatcttgtagcgaactaattggcagatgggagaatgcggttgctgcttctgttggaaaagccgagctggacatttggccagattttcagaatttatcaggagatgttatttcaagagcagcatttggtgtcagacaccacgaaggcagacaaattttcctacttcaggccgagcaagctgaacgccttgttcaatctttccggagtaattacatcccaggcttatcgtatggttctcatcactgtcccaacatctttagtttcagtccccgttttcttttttcaactcatctgttggattatacttcctccgtttcatattactacataagactttctagcattgcccacattcatatagatgttaatgctagaaagccttataacctgaaagaagtagtaatttataactggattatttgtttcacacttctaaaaatgctcttaataaactttcttttactgcattgttgacaccacttattctaagttatttgttagttttataatatataatatgtagtttatctttacaaacgagtggatcatccatcaacttttacctgcatagtatatatttaaaacactacctaaagttcagagtgctcctaatctttctttgttttgtttttgttttgccgaatttatcaatatcaagagaaaattaagtacatacaggacaacataatagttgtgagaaaaacatggatggaccaccaaagaccaaaaagtgctccttacatttgccattatttgtgtccaactttcattgtttcgggaatatatccaacttttatgtagagaaaaaaactaaattcattttgtatccacttattcgtttcatccatagatgatagaactaacataatactctccctccagtcttttaccgacagaaaacaacagaaggatgaaggcaatagacagagagataaagagtattctaagaggcataatagaaaagaggcagaaggccacgaagaacggcgaagccagcaaggacgatctgctcggcttgctcctacaatccaacatggattattacagcgacgaggacggcaaatccagcaaggggatgaccgtcgaggagatcatcgacgaatgcaagctgttctacttcgccgggatggagacaaccgccgtgttgctcacctggacaatggttgccctgagcatgcacccggagtggcaggatcgcgccagggaggagattctgcaggtctttgggcgaaacaaacctgatatcaatggcgttagccgcctgaaagtcgtgagttgtgcactctgccccgtaacgcaatttttgcaccgttttctgcaaaagatgttcacgatttgatgatcgatggagccgatctttggcaggtgaccatggtgctgcacgaggtgctgcgcctgtacccgccggtggtgatgatgaaccgccgcacgtacaaggagatcgagctcggcggcgtcaggtacccggcgggcgtgatgctgtcgctgcccgtgctgttcatccaccgcgacgccgccgcgtgggggcacgacgccggcgagttcgacccggggaggttcgcggagggcgtggccagggcgtgcaaggaccccggcgccggcgcgttcttcccgttcagctggggcccgcgcatctgcatcggccagaacttcgcgctgctggaggccaaggtggcgctcggcatgatcctgcagcgcttcgcgttcgagctgtcgccggcgtacgcgcacgcgccctacaccgtgctgacgctgcacccgcagcacggcgttccggttaggctgcgccgactctgatcgtcgggttagggaaagaaaaaaagatgaaatgaaatgaaatcgtctgtatagatccgtgcatccggcattctgaatctctgatatcaaagcagaacacatttgctgataaacactggaagctccatgttccgggcatccggcactctgaaatctcaatctctgatatgaaagcagaacactatttgctg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0627400, RefSeq:Os01g0627400