Os01g0633400

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Revision as of 04:50, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0633400| Description = CBS domain containing protein| Version = NM_001050191.1 GI:115438752 GeneID:4326596| Length = 2526 bp| Definition =...")
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Gene Name

Os01g0633400

Description

CBS domain containing protein

Version

NM_001050191.1 GI:115438752 GeneID:4326596

Length

2526 bp

Definition

Oryza sativa Japonica Group Os01g0633400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:27025327..27027852

Sequence Coding Region

27025368..27025515,27025614..27025786,27025963..27026052,27026223..27026384,27026470..27026552
,27027151..27027339,27027428..27027806

Expression

GEO Profiles:Os01g0633400

Genome Context

<gbrowseImage1> name=NC_008394:27025327..27027852 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:27025327..27027852 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagactggagcggcgggacaggccggcggcggaggaccggcggcggcggcggcggcgggggagtactggagcgaggcgctcaagtcgttcctggaccatatccccgtctcgtccgtcaacggcgcgatccagccctctccctccccagcgctggagatcaggctcgatggctccgtgccggacgccatcgactccatgtaccgcagcgatgtcgccggcgcggtgatcgtcgacgatgtgcggactagtttcggcaagttcgtcgatcgcgacataggattcgtcgagttcccaagcctcgtcttgtgggcgattgaggaatttgacaaactgggaagtggagcaggtgacaaaaactccgacttcctgacaagtctaaaacagcatcctcagattgcagaaacaaagattgcctggttagcaaagtcgttcctatgggagccattcttccccgttcgatcccatgatacactcttccatgcaatgcttctcttctcaaagcaccgcaggatcaatgtggtacctgttgttgagttgatgaactccagtgttattggatttgtaacgcagaatgcagtaatggaattgcttctcagttcaagtggtcttgagtggctcgataaaattgcagacaaacaactttctgaatttaggttcgcaaatacgaccaagcctgtttcagtctactcggatcagactctcgctgatgcattgcatattctttcaaaggagaaaataggagttgcagttgttgacaggaaaaccagttgtctgattggatcaatacagtgcagcgatctttatcagcttctggacgatagctccctatttaggaacaggaagacattaagtgcggaagaattcgtcaaactgaagagcaaggatgaggacatcagcacagaaaattcatcagcttctggtggccaaaatgtcctcagcctcagaacagggcagaggataacagcaggcctgcctgttaccaaccgcaagtctgacaccctgaagcaagcaatggagaagctgacagcgtcaagaagcagctgcagcttcatcgtcgacgagcacgggcgagtcgaaggagtagtcacggcaagggacatcatctccgtcttctccccgccatgcatggactcgaggatcgacggaggcaccttcttctcggctgcgcttgcgcagaccggctgccgcgttgagcatgggcagatgattcagaactcatag</cdnaseq>

Protein Sequence

<aaseq>METGAAGQAGGGGPAAAAAAGEYWSEALKSFLDHIPVSSVNGAI QPSPSPALEIRLDGSVPDAIDSMYRSDVAGAVIVDDVRTSFGKFVDRDIGFVEFPSLV LWAIEEFDKLGSGAGDKNSDFLTSLKQHPQIAETKIAWLAKSFLWEPFFPVRSHDTLF HAMLLFSKHRRINVVPVVELMNSSVIGFVTQNAVMELLLSSSGLEWLDKIADKQLSEF RFANTTKPVSVYSDQTLADALHILSKEKIGVAVVDRKTSCLIGSIQCSDLYQLLDDSS LFRNRKTLSAEEFVKLKSKDEDISTENSSASGGQNVLSLRTGQRITAGLPVTNRKSDT LKQAMEKLTASRSSCSFIVDEHGRVEGVVTARDIISVFSPPCMDSRIDGGTFFSAALA QTGCRVEHGQMIQNS</aaseq>

Gene Sequence

<dnaseqindica>42..189#288..460#637..726#897..1058#1144..1226#1825..2013#2102..2480#ctgaacagtagtactacagagtctcactcacggcgttggacatggagactggagcggcgggacaggccggcggcggaggaccggcggcggcggcggcggcgggggagtactggagcgaggcgctcaagtcgttcctggaccatatccccgtctcgtccgtcaacggcgcgatccagccctctccctccccaggcaagcaccggtttcttgattcctacacgcgccggccggggcccggggggggggggggggggcgctcatacggttttggtctcgtgtctgtgctgcagcgctggagatcaggctcgatggctccgtgccggacgccatcgactccatgtaccgcagcgatgtcgccggcgcggtgatcgtcgacgatgtgcggactagtttcggcaagttcgtcgatcgcgacataggattcgtcgagttcccaagcctcgtcttgtgggcgattgaggtaatgatcgatcgaactgttcgtccgaattaccgtgagattccatccttcagcttctctatttttactgtgttactatctaccagtggtatgtttcttgcttagagcaaactctgctatttctgcaagttttttttttttatgcttcagaaattatcgaattgcgttgtttttaggaatttgacaaactgggaagtggagcaggtgacaaaaactccgacttcctgacaagtctaaaacagcatcctcagattgcagaaacaaaggtacatgtttctctgcttccaagaagcacgtatcagcgtgctgccattagttcagtagttcactgaaatgaggaagttgttgataaccgaattgtttgcttgtgtttcaacgataacatggaagttatacaaatttacatttcggtttctgctctgacaaacggaaacagattgcctggttagcaaagtcgttcctatgggagccattcttccccgttcgatcccatgatacactcttccatgcaatgcttctcttctcaaagcaccgcaggatcaatgtggtacctgttgttgagttgatgaactccagtgttattggatttgtaacgcaggtacttatttgtgcatttttttgaagcttgatgtttttatagtaagaattcaatcataaagctaatggttaatagatcacactagaatgcagtaatggaattgcttctcagttcaagtggtcttgagtggctcgataaaattgcagacaaacaactttctgaatttaggtaagccttgataataaatgaagtactaccagattgcagtttttcttttgtatccaatgataggggtgcaagcaatagaagtaaattgattaagtgatgaatatggttattcatttttggacttaaacatatactagtgtggctgagtgtgaggctagaggaagtagatcaattatctcaaaaaaaacaagctagtgtaccagctcttgcaatttgcacaactatgtgctaattcattttagctttcaaaaactgtttgttcttcttaaaagttctaatatatgaatggaaacgtataaattttattaaattgtagttttctgctatatgaattgtataacggcagaaatttggacttccgcactaatttgatttttcttttttctctggtcaaaatatttgcataatcataaaaaatgaatcaatctcagcttctcacatgcatgagctaactgtgcatgctttattttgcatgatgactcataagtcgcagacctgaatttgcatagcacctcgctagttaaaattgctaggcagtgttcctgtcaaaaatgaaaaaatgttgctagtgtgaacagatttcatttgcatgttgcaggttcgcaaatacgaccaagcctgtttcagtctactcggatcagactctcgctgatgcattgcatattctttcaaaggagaaaataggagttgcagttgttgacaggaaaaccagttgtctgattggatcaatacagtgcagcgatctttatcagcttctggacgatagctccctatttaggaacaggaagtaagcattgtttttctttcagttctctaattcttgtccctcctcgactcctcgagaatactttgctgaccatatacattcctttcaggacattaagtgcggaagaattcgtcaaactgaagagcaaggatgaggacatcagcacagaaaattcatcagcttctggtggccaaaatgtcctcagcctcagaacagggcagaggataacagcaggcctgcctgttaccaaccgcaagtctgacaccctgaagcaagcaatggagaagctgacagcgtcaagaagcagctgcagcttcatcgtcgacgagcacgggcgagtcgaaggagtagtcacggcaagggacatcatctccgtcttctccccgccatgcatggactcgaggatcgacggaggcaccttcttctcggctgcgcttgcgcagaccggctgccgcgttgagcatgggcagatgattcagaactcatagtttctacctcatcatctaaaacaatgtttacagttttgttgcctgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0633400, RefSeq:Os01g0633400