Os01g0634300

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Revision as of 04:50, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0634300| Description = Heat shock protein DnaJ, N-terminal domain containing protein| Version = NM_001050194.2 GI:297597252 GeneID:4326602| ...")
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Gene Name

Os01g0634300

Description

Heat shock protein DnaJ, N-terminal domain containing protein

Version

NM_001050194.2 GI:297597252 GeneID:4326602

Length

8108 bp

Definition

Oryza sativa Japonica Group Os01g0634300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:27074462..27082569

Sequence Coding Region

27074462..27074497,27075849..27076025,27076574..27076663,27076751..27076816,27076905..27076975
,27077104..27077185,27077302..27080833,27082199..27082569

Expression

GEO Profiles:Os01g0634300

Genome Context

<gbrowseImage1> name=NC_008394:27074462..27082569 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:27074462..27082569 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggagctcgcggcggcggcggcgcccccgcggcacagggagcggcggaggcaccggaggaaggcgtcgtcgacggacgcggcggcggcgtacggcgacgtgttcggcgggccgccgcagttcgccgtggcgttcgacggggtgccggcggactacggggaggtgttcggcggcgtcgcggcctcctgctccatcccttacctcgacctgcccccggccgccgcccgcgacgacggcgccggggcaggggcgtacggcgagatcttcggccggttcgacttcggggacttcgcggagccgtacgaggacctgctggcggaggcggtggcgttggcggcggagatcgcgtcgtcgagcgagagctcgaggtcatcagtcagaaaagaatctggccaactagatgctgatccatctatactccatcaacactattcaactgtaggttatgaccaacactttgatgaagacgaattttctccaatctcctctcctccggatagtgggaaacagtttagtatgtcatataacaaggctaccaggggaagaccagatgatatagttaaaatgactacttgtatggtggagcctccgataagttatgtagttgactctcgcaatatttcaaacaagtcagcaatggatcaagttgtagtagtggactgtgatacatttgcaaatggtgaaaaaggaagcatgggcctgacttttccatcaagttcaagcctgaagagtgctagtagtgattctgtggctgatcagaacctgcacacaccaatatgtcatccaatttctaagaatgattgtgaagatgaagattaccacaagaggttaagcacccattcagcatcaagtgaggaagtaccttcccctgactacccattcttaagggtctcaaataacagccttcacacacaacccatcaaagtacagccgcctttattggcaccatctaaattgcttaataaaaaggaaagtaaagcaaatggtgaaaaaggaagcacgggcctgactttcccatcaagttcaagtgtgaagagtgctagtagtgatcctatggctgatcagaacctgcacacaccaacatgtcatcccatttctaagactgattgtgaagatgaagattaccacaagaggttaagcacccattcagcatcaagtgaggacgtaccttcccctgactacccattcttaagggtcccaaataacagccttcacacacaacccatcaaagtacagccaccatccaaattgcttaataaaaaggaaagtaaagcaaatggagattctgaagtcagtactaactcagctgctgctgctgctgctatcaaagaagcaatggagtttgctgaagctcggttaaaagctgccaaagaattgatggagagaaaaggtgacagttttaaacttcgaaagaagccaggtcatcatagaggcacaaaatcgacagaacttaaggaaagtatggcacctgaagaggtgcgtgtttatgatgaaaagctgaccatgagaaggatagtgaaagaggaaaagacctatgaggagacagctttggtgaataagaatggagacagcagtgcagttaacttaactcactgtgatcacaatgaaaaaggggttctacaaccaaggaagcctcagcatacagcgcaaagtggctctaaactagaacaactaggaaagtggacatcaggtgctgaattttatgtactgattagccctgaccagaaatgcaaaactaactcagttacatgtgaaggagataatgttcagacaacaaatccctccagcaagctcggccagtttgagaaaggaaaaggagaaaccacttcaggggattttgtagggtgtggaaaatcatgggatggtggtgacatagcagagttgagaatggaacatgtaaatttgagagaatatgctataggttctacggaggatggatgcaaggctcctactgctccagaaatttcttttagcaatgaaaaacccacataccaagagtcaactgagacccatttcaaagaatgtgtgggggcacaaaattatcaagaacgatatggtgatgatggggcatttgagatttcatgtgtggatagttcaaagctacatgctccagaaatacccggtgcatctttggagtcttgtatatctggaggtcactgcaatggtaataaaagtccttctgatgctagtactaaggaaacaacatcattaggagaatctaacaaagaaaacaacaatatagaggcacttgaggttccatgtgctgatgagatgcagagccaaatattacaggaatatcatgaatttcgtaatgaaaatattgatgaaaagaaggcaagtcaagtgaaagtatcaaaattagaagagtcggtggaatattatgaaaccccaaatttccagaaaagttcgagtacagctcatggagagaccgaaactgttgagaaagaaaagatgtttagtttttctgatgaattacgcccgcagaataagaacataggaataactgaagcacctccagaatcactcatccacaaagaaattaagaaatttggaactgaggagaaagcttatattactttggaaggagatgtggttcaaaaatctggatctctggaaagggaagctaacattactttggaaagtgctagtgctaatgaaaatgaagaagcagaagaagcgaatgcatttgtggagggcattaatgtgatggaaacccatgttagtacatatggtacttctgttgaagattcagatcagatacaagactctgaaaacagaatggacggaatgggggatcttgtatctcatggtaatgaagaagcagcaaaagatccctggttagataatagcgagaagtcacaggtggaagaaattttcagccatgaagagggccagctatctgtcgaaggtggtatcgatggaggaccaaatgatgcatatgcaggagttaatgcaataaatgatggaaatggtaatgattctgaaactaaagttattattgatgatggcactgattttaacacgaagatgagcacatgctcaaaagaactgagtgcttcatttttagagtcatctgctagcatgcagcacttgtctcagattgacaagtctattgctgctcagacatctgataagagcacccctcttgaaaaccttggagaggattgcagagaaagagaatttccagaagaaaatagtacagcactggaacaagggcaagctattggaagtaaaatggaaggagatgacaaagataaacagtcaaaattaaatgtaaaggatcagaaatattttcatttggacagctacattgtacctaaatttacagagaacactacattgaattttgtccagaaattgatagatgagacccctgatggtcagagaattgaagggagggaaaatgtgaaaaagacactgagagaaactgagaaggaggtcttgcatagactagatgaagacaaagaaatatacaaaatggaaagagaaaaggaacaagctaaagagaggtcaagaagagaattagaagaagagaaggaacgggagagagagcgagcaaaagatagacttgctgttcagagagctacgaaagaagcacatgagagagcatttgctgaggcccgtgcaaaggctgaaagaatagcattggaaaggattaccttagcacgtcaacgagcatctgcagaagctcgagagaaagaggagaaggcaactgctgaagcagctactgagaaggcttctagagaagctagactaaaggcagaacgtgcagcagttgagagagcaactgctgaagctcgggagagagcaattgaaaaggcaaaagctgctgcagatgcaaaggagcgaatggaaagatttagatcctccttcaaggacagtttcaagtctactaatcaggataatcaactggacaaacagtttcagaagacagcttctaataactatgaaagaagcacggattctagtaatcaaggtattgtagttgagtttgagtcagctctgagacataaagcaagatctgagagggaacatcgcacagctgagcgagcggccaaagctctagctgaaaagaatatgcgggacatgctggctcagagagagcaagcagagagacatagattagctgaataccttgaccccgaagtcaagagatggtcaaatggaaaggaaggaaatctgcgagcattgctatctacattgcaatatatccttggttcagataatggttggcaatcggttcccctcacagatctcattacagcaactgctgtcaagaaagcatatagaagggcaaccctttgtgtccatcccgataaactacaacaaaggggtgctacaatcagacagaaatatatttgtgagaaggtgtttgatcttcttaaggaggcatggaacaaattcaattccgaagagcgatag</cdnaseq>

Protein Sequence

<aaseq>MEELAAAAAPPRHRERRRHRRKASSTDAAAAYGDVFGGPPQFAV AFDGVPADYGEVFGGVAASCSIPYLDLPPAAARDDGAGAGAYGEIFGRFDFGDFAEPY EDLLAEAVALAAEIASSSESSRSSVRKESGQLDADPSILHQHYSTVGYDQHFDEDEFS PISSPPDSGKQFSMSYNKATRGRPDDIVKMTTCMVEPPISYVVDSRNISNKSAMDQVV VVDCDTFANGEKGSMGLTFPSSSSLKSASSDSVADQNLHTPICHPISKNDCEDEDYHK RLSTHSASSEEVPSPDYPFLRVSNNSLHTQPIKVQPPLLAPSKLLNKKESKANGEKGS TGLTFPSSSSVKSASSDPMADQNLHTPTCHPISKTDCEDEDYHKRLSTHSASSEDVPS PDYPFLRVPNNSLHTQPIKVQPPSKLLNKKESKANGDSEVSTNSAAAAAAIKEAMEFA EARLKAAKELMERKGDSFKLRKKPGHHRGTKSTELKESMAPEEVRVYDEKLTMRRIVK EEKTYEETALVNKNGDSSAVNLTHCDHNEKGVLQPRKPQHTAQSGSKLEQLGKWTSGA EFYVLISPDQKCKTNSVTCEGDNVQTTNPSSKLGQFEKGKGETTSGDFVGCGKSWDGG DIAELRMEHVNLREYAIGSTEDGCKAPTAPEISFSNEKPTYQESTETHFKECVGAQNY QERYGDDGAFEISCVDSSKLHAPEIPGASLESCISGGHCNGNKSPSDASTKETTSLGE SNKENNNIEALEVPCADEMQSQILQEYHEFRNENIDEKKASQVKVSKLEESVEYYETP NFQKSSSTAHGETETVEKEKMFSFSDELRPQNKNIGITEAPPESLIHKEIKKFGTEEK AYITLEGDVVQKSGSLEREANITLESASANENEEAEEANAFVEGINVMETHVSTYGTS VEDSDQIQDSENRMDGMGDLVSHGNEEAAKDPWLDNSEKSQVEEIFSHEEGQLSVEGG IDGGPNDAYAGVNAINDGNGNDSETKVIIDDGTDFNTKMSTCSKELSASFLESSASMQ HLSQIDKSIAAQTSDKSTPLENLGEDCREREFPEENSTALEQGQAIGSKMEGDDKDKQ SKLNVKDQKYFHLDSYIVPKFTENTTLNFVQKLIDETPDGQRIEGRENVKKTLRETEK EVLHRLDEDKEIYKMEREKEQAKERSRRELEEEKERERERAKDRLAVQRATKEAHERA FAEARAKAERIALERITLARQRASAEAREKEEKATAEAATEKASREARLKAERAAVER ATAEARERAIEKAKAAADAKERMERFRSSFKDSFKSTNQDNQLDKQFQKTASNNYERS TDSSNQGIVVEFESALRHKARSEREHRTAERAAKALAEKNMRDMLAQREQAERHRLAE YLDPEVKRWSNGKEGNLRALLSTLQYILGSDNGWQSVPLTDLITATAVKKAYRRATLC VHPDKLQQRGATIRQKYICEKVFDLLKEAWNKFNSEER</aaseq>

Gene Sequence

<dnaseqindica>8073..8108#6545..6721#5907..5996#5754..5819#5595..5665#5385..5466#1737..5268#1..371#atggaggagctcgcggcggcggcggcgcccccgcggcacagggagcggcggaggcaccggaggaaggcgtcgtcgacggacgcggcggcggcgtacggcgacgtgttcggcgggccgccgcagttcgccgtggcgttcgacggggtgccggcggactacggggaggtgttcggcggcgtcgcggcctcctgctccatcccttacctcgacctgcccccggccgccgcccgcgacgacggcgccggggcaggggcgtacggcgagatcttcggccggttcgacttcggggacttcgcggagccgtacgaggacctgctggcggaggcggtggcgttggcggcggagatcgcgtcgtcgagcgagagctcgaggtacgaattcccctcctccttttaccttttttttcccccgttgcgatatttgtaaagctcattgttcctgggtaagcatgtgcatgtccactagaaattagaccgattaagctgatcagaagatctcttggtgaaccgtggaaggtttcctgatgcttcccttccctagcaagttcccttagcaaattcagacgagagtgtcaatgtgcctatttggggttcaaattctgcctacacaaccactttctatttagtactaattagcataacctcaagtccctacttcagtgtttgcttgactttcagtaaatgggcatggtggtgcgtcaattctgtgctacgtgtatcacaattttctgatctataaaggtgactcagtttggtcgagtgctaatttgtcatcgttttgagtggatgctttggagtaattaatgtgattggagagtccagatatggtatacatctccgtgttccatagacagttctttttcacaaaggtggtttctttcggacgaagtgatgtcttttctctgcaaatctgaaagaatctaggaggttgctatgtattttcatttcgatcataggatcttcttattgaaatgttctgtccaggagtttcaagcacccttttgttgtaaaaatgagaaaggagtaacgatttcaatctctagatagtagaaattgtagtcttcattggagttcatcactcttaattttatgtacttcatggtaggtaaatccagctatgaaattgcacaggaaaagacaattgaaccaaaatggataacttctcaaggaaacatttactatcagatctaccactgttccttagccctataattttgtctacatccaattgctgctttactgccctatcgcgttctccctttactattcttacctagtctagcagtggaccccattgtctgtctagcaatgtttattttggtgtggacttcacattgtagtactactctctttcttttcacaagatgtattgtggtcatcatggcagttaagaaggctataaaaccaagtgaacagtaatgggaaattaccatgattttaatggtgttaatgtttttaaggttaagaatggtaatagttggcatgactgtttattcgtatatgctgaagaaaagaggtgagataaacgaggatacaagagaaaaaaaaatgtttcaagctcatcttaaaatttgaaacaatatcgcaaaaaacatgacttgtggatagcttgctttgttgtgctaattctattgctatttttcttcacatttgcttgactgaagttcttttttcattataatatgtcaaaagcacatgttacttttaaacttatggccaataatttcatatatacaggtcatcagtcagaaaagaatctggccaactagatgctgatccatctatactccatcaacactattcaactgtaggttatgaccaacactttgatgaagacgaattttctccaatctcctctcctccggatagtgggaaacagtttagtatgtcatataacaaggctaccaggggaagaccagatgatatagttaaaatgactacttgtatggtggagcctccgataagttatgtagttgactctcgcaatatttcaaacaagtcagcaatggatcaagttgtagtagtggactgtgatacatttgcaaatggtgaaaaaggaagcatgggcctgacttttccatcaagttcaagcctgaagagtgctagtagtgattctgtggctgatcagaacctgcacacaccaatatgtcatccaatttctaagaatgattgtgaagatgaagattaccacaagaggttaagcacccattcagcatcaagtgaggaagtaccttcccctgactacccattcttaagggtctcaaataacagccttcacacacaacccatcaaagtacagccgcctttattggcaccatctaaattgcttaataaaaaggaaagtaaagcaaatggtgaaaaaggaagcacgggcctgactttcccatcaagttcaagtgtgaagagtgctagtagtgatcctatggctgatcagaacctgcacacaccaacatgtcatcccatttctaagactgattgtgaagatgaagattaccacaagaggttaagcacccattcagcatcaagtgaggacgtaccttcccctgactacccattcttaagggtcccaaataacagccttcacacacaacccatcaaagtacagccaccatccaaattgcttaataaaaaggaaagtaaagcaaatggagattctgaagtcagtactaactcagctgctgctgctgctgctatcaaagaagcaatggagtttgctgaagctcggttaaaagctgccaaagaattgatggagagaaaaggtgacagttttaaacttcgaaagaagccaggtcatcatagaggcacaaaatcgacagaacttaaggaaagtatggcacctgaagaggtgcgtgtttatgatgaaaagctgaccatgagaaggatagtgaaagaggaaaagacctatgaggagacagctttggtgaataagaatggagacagcagtgcagttaacttaactcactgtgatcacaatgaaaaaggggttctacaaccaaggaagcctcagcatacagcgcaaagtggctctaaactagaacaactaggaaagtggacatcaggtgctgaattttatgtactgattagccctgaccagaaatgcaaaactaactcagttacatgtgaaggagataatgttcagacaacaaatccctccagcaagctcggccagtttgagaaaggaaaaggagaaaccacttcaggggattttgtagggtgtggaaaatcatgggatggtggtgacatagcagagttgagaatggaacatgtaaatttgagagaatatgctataggttctacggaggatggatgcaaggctcctactgctccagaaatttcttttagcaatgaaaaacccacataccaagagtcaactgagacccatttcaaagaatgtgtgggggcacaaaattatcaagaacgatatggtgatgatggggcatttgagatttcatgtgtggatagttcaaagctacatgctccagaaatacccggtgcatctttggagtcttgtatatctggaggtcactgcaatggtaataaaagtccttctgatgctagtactaaggaaacaacatcattaggagaatctaacaaagaaaacaacaatatagaggcacttgaggttccatgtgctgatgagatgcagagccaaatattacaggaatatcatgaatttcgtaatgaaaatattgatgaaaagaaggcaagtcaagtgaaagtatcaaaattagaagagtcggtggaatattatgaaaccccaaatttccagaaaagttcgagtacagctcatggagagaccgaaactgttgagaaagaaaagatgtttagtttttctgatgaattacgcccgcagaataagaacataggaataactgaagcacctccagaatcactcatccacaaagaaattaagaaatttggaactgaggagaaagcttatattactttggaaggagatgtggttcaaaaatctggatctctggaaagggaagctaacattactttggaaagtgctagtgctaatgaaaatgaagaagcagaagaagcgaatgcatttgtggagggcattaatgtgatggaaacccatgttagtacatatggtacttctgttgaagattcagatcagatacaagactctgaaaacagaatggacggaatgggggatcttgtatctcatggtaatgaagaagcagcaaaagatccctggttagataatagcgagaagtcacaggtggaagaaattttcagccatgaagagggccagctatctgtcgaaggtggtatcgatggaggaccaaatgatgcatatgcaggagttaatgcaataaatgatggaaatggtaatgattctgaaactaaagttattattgatgatggcactgattttaacacgaagatgagcacatgctcaaaagaactgagtgcttcatttttagagtcatctgctagcatgcagcacttgtctcagattgacaagtctattgctgctcagacatctgataagagcacccctcttgaaaaccttggagaggattgcagagaaagagaatttccagaagaaaatagtacagcactggaacaagggcaagctattggaagtaaaatggaaggagatgacaaagataaacagtcaaaattaaatgtaaaggatcagaaatattttcatttggacagctacattgtacctaaatttacagagaacactacattgaattttgtccagaaattgatagatgagacccctgatggtcagagaattgaagggagggaaaatgtgaaaaagacactgagagaaactgagaaggaggtcttgcatagactagatgaagacaaagaaatatacaaaatggaaagagaaaaggaacaagctaaagagaggtcaagaagagaattagaagaagagaaggaacgggagagagagcgagcaaaagatagacttgctgttcagagagctacgaaagaagcacatgagagagcatttgctgaggcccgtgcaaaggctgaaagaatagcattggaaaggattaccttagcacgtcaacgagcatctgcagaagctcgagagaaagaggagaaggcaactgctgaagcagctactgagaaggcttctagagaagctagactaaaggcagaacgtgcagcagttgagagagcaactgctgaagctcgggagagagcaattgaaaaggcaaaagctgctgcagatgcaaaggagcgaatggaaagatttagatcctccttcaaggacagtttcaagtctactaatcaggtagttgatgtcattatattttttacactacagttccaaactaaatacttaaatatttgtctaagcatctagtaataatacctttaagtagtatctcatccatgttcttgatgcaggataatcaactggacaaacagtttcagaagacagcttctaataactatgaaagaagcacggattctagtaatcaaggtattggtaataacatcctgaaacatttctattataagaaggggaggagtttgtgctttgtcagttttatctttgctgtaatatttcttcatagttatacttgtcaaaacttattgtaacgtatttatttacagtagttgagtttgagtcagctctgagacataaagcaagatctgagagggaacatcgcacagctgagcgagcggtatgctgaaatgttttgcatactcttttgcctactgcatcgtctctttatttgttgttttcaattctttaacatcaccaattttcaggccaaagctctagctgaaaagaatatgcgggacatgctggctcagagagagcaagcagagagacatgtaatacatgtagtagttagaaaaaaaaaaggtttttgttgttttgcaaaatccttctattctaaaatcatgtctctttttgtacagagattagctgaataccttgaccccgaagtcaagagatggtcaaatggaaaggaaggaaatctgcgagcattgctatctacattgcaatatgtaaatacttttatttgcgggacttctatttagagttttagaccactcttaacttccactcaagtttatcagttatgctaatttcttttcctagatcttttaatatgcttacttttggcctcaagtaaattacgttcacttctaaaattcatcccaggatgtttaatgaagaaatgactcgaagaacaacacccagccttctaaggacagcatatttaattccacttaacaatataaactagacctaatcattgtataaatggcccaattgtttgtatatgtttatgctgttaaaatattgtcagaaaggacaaagtaacacacaagcatatttaaaagaaaaataagtgaatcaagtccttgcacattttttgcagttttgttgatgctaaaaatcttcccatggaaattatcagttgaactgacttacgctttacttgcttagaccaattctgcactgcatcattatacagtcatgttgaatttgaattttcacagatgaactaaactggatattagtcaactcatggaaacctttttcctggcagatccttggttcagataatggttggcaatcggttcccctcacagatctcattacagcaactgctgtcaagaaagcatatagaagggcaaccctttgtgtccatcccgataaactacaacaaaggggtgctacaatcagacagaaatatatttgtgagaaggtgtttgatcttcttaaggtacattatttgttcacatcttatgcatattcttgtggttttcatctttgaatttccacccccagttacttatcagcaattgctaattttcagagaagtttgttcatagctgatgcctgatggctatcatttagtcttcttaaagtgcatcacatttgcattatggaccataattttgtttacctttcaccatgtctcttcatcaagagtactaaattttttgtcttggtaaaacccagattttaccagggttggtaattccagaaaaaaaaaaaaccccgggttttgaaaccctgcttttgggacccttcaactcttatcactattttttccctatcagaatggttcagataggtcttgaactcagatcacctagtttgacatcatgctgactttcgcatttaccaactctccaactgttgtcattttatgataggcagtatccaagcaacttctaacatggatcttgaaagccatcatcattgagatttatgcagcagcactatgtcttacaaatttgattgtaacccaagactttatatgcttgttacttttcatctggagcagtatggttttgacttcagcagtttgtgcccagttatccacctgcttccctgtttttggttaacaacggggacctgcttagataaaagcttatctggacttgggtctggttagcaatccattttctaactagctttcatgctttggtgttatctgagattctttcaatgacttgtgttgaagggatatctataagtgctgatcgattgcataggacctgtagtagctatcgaacggggaaattagactgccggtttatggctatgggaagtaaatcatcgcccctatgatccaacccattaaggctttgttcggttaatttctccagcaagaaaattgggagggatttattccatacctattatgggtgttgaattattccccctcaatccctctcatggggattaaatgaaagcttggattcgttatgctcatcagctccaacaagttctaccttgtttttcatcctccattcttagcatccagctggttcctggtttgagtgggctgttttcagtcccttgtgtttcacacgttacaagccctgttattgcggttacttggctggaaactggcgctcaccagttacccgcagtaggtataatttttattttcaaaagcttgttcattccagaatctgtatggaacataactgcaaaactaagcctttttttttcatctctgaaaacacccataaaacctggaaattttgttttgactaggtaatgtatttatatttacttaatgcaataaatggaggctgattggtatatgctgctatatgcaggaggcatggaacaaattcaattccgaagagcgatag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0634300, RefSeq:Os01g0634300