Os01g0641600

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Revision as of 04:50, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0641600| Description = Ubiquitin domain containing protein| Version = NM_001050220.1 GI:115438810 GeneID:4326557| Length = 2227 bp| Defini...")
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Gene Name

Os01g0641600

Description

Ubiquitin domain containing protein

Version

NM_001050220.1 GI:115438810 GeneID:4326557

Length

2227 bp

Definition

Oryza sativa Japonica Group Os01g0641600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:27529799..27532025

Sequence Coding Region

27529799..27529873,27530427..27530499,27531260..27531839,27531887..27532025

Expression

GEO Profiles:Os01g0641600

Genome Context

<gbrowseImage1> name=NC_008394:27529799..27532025 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:27529799..27532025 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaaccgtgacctcgtcatcattgggattggcactgagatcaaaaacgcggagccattggcaggtgcgatagggttcaagaaaatgagtgacaagaccgatgtgtacaacctccgcgtcatcaccctcaacctcaatctccttaccgagtccagatacaggcccgagttggataatccgccgaaccggagatggagcccaacgcgaacgctgggcgtcgcggccgtatcggaactggaaaccaacccgaacggcgaaagcttgcctctaccaccaataaaaaccacaggaccggagccgcataacacaacaccagtcctacatcgatcgattcaagtctcgacgcaaagccaatacgcccacagcatcgaagcaaagccccgcggttttgtcgtacgtcgtaaatcttccacaaaccagcagccgaatccgtcgtcgatcgacgtccgtcgagacacgaagatgcagatcgtcgtggagacccagatggggaagctcatcacgctcgaggtggagagcagcgacacgatctgtcaaggagaaggtccaggagaaggagggcatcccgatcccgccggaccagcagctgctcttcttcgaccacaagttgctggagaacggctgcacggtggctggctacaacatccaggacggctcgacgctgagcctctatctccgcctccttccaggcagcatgaacatcaaggtgaagcctctcagcggcaaagggcgcgcatcgaggaggaggacaggcaaatagggcagctcatctacaaaggggtgctggtcaccgacgacaaggcggcccacgagtacaatatcgaggccggatccgtgctccacctcacacttaatctcagggcctag</cdnaseq>

Protein Sequence

<aaseq>MNRDLVIIGIGTEIKNAEPLAGAIGFKKMSDKTDVYNLRVITLN LNLLTESRYRPELDNPPNRRWSPTRTLGVAAVSELETNPNGESLPLPPIKTTGPEPHN TTPVLHRSIQVSTQSQYAHSIEAKPRGFVVRRKSSTNQQPNPSSIDVRRDTKMQIVVE TQMGKLITLEVESSDTICQGEGPGEGGHPDPAGPAAALLRPQVAGERLHGGWLQHPGR LDAEPLSPPPSRQHEHQGEASQRQRARIEEEDRQIGQLIYKGVLVTDDKAAHEYNIEA GSVLHLTLNLRA</aaseq>

Gene Sequence

<dnaseqindica>1..75#629..701#1462..2041#2089..2227#atgaaccgtgacctcgtcatcattgggattggcactgagatcaaaaacgcggagccattggcaggtgcgataggggtcagcgccatgcattttggcgctgaccccatatatatgttacatgcaaaacatggctaatactgttatgaaccgaagtatagcacaacggtgaatgtgtccactgtcaggcagaagactagggttcgatccctacgtcctgctttttttttgtttcttttcgtgtgattaaagcaagcaaaaaaatgagcaatgaggggtcgaacctgggatcataggaagttaaaccaccaaggcacatcatagaaagtgacaagaattaacacaaacccactttatcactacataaggggtcagcgccaaaacccatggctgatcccatccaaccctccatagtgccccgccaaggtgtgcttagcgtcatgatcgttggcgtttaatcgttaacctcagcgtcaatgacgctgaggtcacggtttatttttgaaataagtttttgacacggtttacttttcaaataaattttctaaaagagttaaattatcaaaatttcggcatctatatacctaatactgatagtgccactaacattttctgatggcgtaatgtgcagttcaagaaaatgagtgacaagaccgatgtgtacaacctccgcgtcatcaccctcaacctcaatctccttaccggtaattaaatttcttgccgaaagaccaaccatgcatggagttgccgcagtgggtgtcggcgattgtgagccggttgccctcgtcatcaccgccgagtggacgatgtccgagagagggagcgatggtggacgagagacagtagatgagagagacgccgctggccgacggtggcggcggcggctgctgcggacgaatgaggccgatacgagagggatatgagcccacgacccgacgggcccgggagccgagtcgagcgaggctcctatgccatatttgcgctgggcctgaagccgcaacgaactagacgtccgattctgagattgtccatgcggcaatcatcggggtcggggctgcacgggagccgatttacagaattatacccggtctccaccaaattttttttcgtctcatcctggcacgccggccagcttcaaataatgcatgtactcctaccgtgtgagagtggactcagtgtttttctcgtatccgcaatgacagaacttttacgccctttcgacatcaaaatcgtaccgtacccgactgggatgcacttcgtcgcttacaatacaagaatcacactagtcctgagttagatcgggctgcatcttttcggcacatcgtataatcgtacccgacaaagccgtgtactccggcatcgtagtcgtagaaacgtacacgatgacgagtcccattccgagaactactacatgatctcaaggaaaaatcccaaccggcaacagtacgtcttttgtatcttcagagtccagatacaggcccgagttggataatccgccgaaccggagatggagcccaacgcgaacgctgggcgtcgcggccgtatcggaactggaaaccaacccgaacggcgaaagcttgcctctaccaccaataaaaaccacaggaccggagccgcataacacaacaccagtcctacatcgatcgattcaagtctcgacgcaaagccaatacgcccacagcatcgaagcaaagccccgcggttttgtcgtacgtcgtaaatcttccacaaaccagcagccgaatccgtcgtcgatcgacgtccgtcgagacacgaagatgcagatcgtcgtggagacccagatggggaagctcatcacgctcgaggtggagagcagcgacacgatctgtcaaggagaaggtccaggagaaggagggcatcccgatcccgccggaccagcagctgctcttcttcgaccacaagttgctggagaacggctgcacggtggctggctacaacatccaggacggctcgacgctgagcctctatctccgcctccttccaggcagcatgaacatcaaggtgaagcctctcagcggcaaaggtgtttggcctgggcatcgagccgacggacaccggggccatgatcagggcgcgcatcgaggaggaggacaggcaaatagggcagctcatctacaaaggggtgctggtcaccgacgacaaggcggcccacgagtacaatatcgaggccggatccgtgctccacctcacacttaatctcagggcctag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0641600, RefSeq:Os01g0641600