Os10g0497400

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Revision as of 08:43, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0497400| Description = Non-protein coding transcript, putative npRNA| Version = NM_001189296.1 GI:297727722 GeneID:9270095| Length = 3148 b...")
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Gene Name

Os10g0497400

Description

Non-protein coding transcript, putative npRNA

Version

NM_001189296.1 GI:297727722 GeneID:9270095

Length

3148 bp

Definition

Oryza sativa Japonica Group Os10g0497400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:19403649..19406796

Sequence Coding Region

19404939..19405235,19406207..19406224

Expression

GEO Profiles:Os10g0497400

Genome Context

<gbrowseImage1> name=NC_008403:19403649..19406796 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:19403649..19406796 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>agcccgatatcattacccttggcaggtaagatggatgaagcaatgaagttactttctggcatggtctcagttgggttgaaacctaatactgttacttatagcactttgattaatggctactgcaaaattagtaggatggaagacgcgttagttctttttaaggagatggagagcagtggtgttagtcctgatattattacgtataacataattctgcaaggtttatttcaaaccagaagaactgctgctgcaaaagaactctatgtcaggattaccgaaagtggaatgcagattgaattagcacatacaacataa</cdnaseq>

Protein Sequence

<aaseq>SPISLPLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKIS RMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGMQIELAH TT</aaseq>

Gene Sequence

<dnaseqindica>1291..1587#2559..2576#aactgcgcaagagatcgatcgcgatcaccctgctcgtcgccgatctcctacaccatccctgccatctccttcccctccactggctgctgctgcacctgtcagctagggcgggcatggcgcgccgcgccgcttcccgcgctgctggcgcccttcgctcggagggctcgatccaagggcgagggggccgcgcggggggcagtggcggtggcgcggaggacgcacgccacgtgttcgacgaattgctccgtcgtggcataccagatgtcttctcctacaatattcttctcaacgggctgtgtgatgagaacagaagccaagaagctctcgagttactgcacataatggctgatgatggaggtgactgcccacctgatgtggtgtcgtacagcaccgtcatcaatggcttcttcaaggagggggatctggacaaaatgcttgaccagaggatttcgccaaatgttgtgacctacaactctattattgctgcgctatgcaaggctcaaactgtggacaaggccatggaggtacttaccaccatggttaagagtggtgtcatgcctgattgcatgacatataatagtattgtgcatgggttttgctcttcagggcagccgaaagaggctattgtatttctcaaaaagatgcgcagtgatggtgtcgaaccagatgttgttacttataactcgctcatggattatctttgcaagaacggaagatgcacggaagcaagaaagatttttgattctatgaccaagaggggcctaaagcctgatattactacctatggtaccctgcttcaggggtatgctaccaaaggagcccttgttgagatgcatggtctcttggatttgatggtacgaaacggtatccaccctaatcattatgttttcagcattctagtatgtgcatacgctaaacaagagaaagtagaagaggcaatgcttgtattcagcaaaatgaggcagcaaggattgaatccgaatgcagtgacctatggaacagttatagatgtactttgcaagtcaggtagagtagaagatgctatgctttattttgagcagatgatcgatgaaggactaagacctgacagcattgtttataactccctaattcatagtctctgtatctttgacaaatgggagaaggctgaagagttatttcttgaaatgttggatcgaggcatctgtcttagcactattttctttaattcaataattgacagtcattgcaaagaagggagggttatagaatctggaaaactctttgacttgatggtacgaattggtgtgaagcccgatatcattacccttggcaggtaagatggatgaagcaatgaagttactttctggcatggtctcagttgggttgaaacctaatactgttacttatagcactttgattaatggctactgcaaaattagtaggatggaagacgcgttagttctttttaaggagatggagagcagtggtgttagtcctgatattattacgtataacataattctgcaaggtttatttcaaaccagaagaactgctgctgcaaaagaactctatgtcaggattaccgaaagtggaatgcagattgaactttgttagatttaattggataattaatccatttaaatcaattaaatcaaataaattccaaggctcattatgctaggaattcatgtgaattcattcttctatgggatatcaatgggatgaagagttttgagaattaatccatttgattaaggaattggtaacttatatcaattaatcctaattgatggatggttgatggttgtgtagtggaggatggttcatggctagttgatgacaattagttgctctattcctcttcctattccattggtaacttacatcaattactcttaattgattgttggttgatggttgtgtagtggaggatggttcatggctagttgatgacaattagttgctccattcctcttcctattccatgactcttactcttcatcttccattcctcttataaaatgagaatggatttgatctcccgcgagaagaagaagacacactttcatccattttcaaaagctgttgctgctacggtaatcccatcccgacgagtgtgtgcacacgcgttgggagagtaggcctccgaaaccacgcgttgctgcgacgtttgcacagacgggcgggcgatcaggtttttggggagcgcaaggcgcgactactcactgttcgtcaacatctacttcatcttcaccaacatgtcgaacactggagacaaggagaaggagactcccgtcaacaccaacggaggcaatactgcctcaaactccagcggaggaccattcttggggtataaccttattacattatttcaattagaagttttactgttaatgttcatcgcaatgtcaacattgtgtcattatgtgattgttgatgcttattcaacgttaagcatgctcatgttgattacattcaccactatcactggatcaaatcctattgtaaatatcatgtttattatcttgttattttggattaaaatatgccgaattatgaccaaatttccaacaaacttagcacatacaacataatccttcatggactttgcaaaaacaaactcactgatgatgcacttcgaatgtttcagaacctatgtttgatggatttgaagcttgaggctaggactttcaacattatgattgatgcattgcttaaagttggcagaaatgatgaagccaaggatttgtttgttgctttctcgtctaacggtttagtgccgaattattggacgtacagattgatggctgaaaatattataggacaggggttgctagaagaattggatcaactctttctttcaatggaggacaatggctgtactgttgactctggcatgctaaatttcattgttagggaactgttgcagagaggtgagataaccagggctggcacttacctttccatgattgatgagaagcacttttccctcgaagcatccactgcttccttgtttatagatcttttgtctgggggaaaatatcaagaatatcatatatttctccctgaaaaatacaagtcctttatagaatctttgagctgctgaagcattttgcagctttgaaattctgtgttggaattcttttctcctacagtccgattagag</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0497400, RefSeq:Os10g0497400