Os01g0645000

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Revision as of 04:51, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0645000| Description = Similar to TIS11 protein (dTIS11)| Version = NM_001050235.1 GI:115438840 GeneID:4325916| Length = 1558 bp| Definiti...")
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Gene Name

Os01g0645000

Description

Similar to TIS11 protein (dTIS11)

Version

NM_001050235.1 GI:115438840 GeneID:4325916

Length

1558 bp

Definition

Oryza sativa Japonica Group Os01g0645000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:27715729..27717286

Sequence Coding Region

27715949..27716269,27716361..27717035,27717220..27717243

Expression

GEO Profiles:Os01g0645000

Genome Context

<gbrowseImage1> name=NC_008394:27715729..27717286 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:27715729..27717286 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>cttcgatcggcactgccccgagaggaagcgcttgtctccccggtgcgctcggcattggagctcaagccgttcaacttcggagaccagcggctcgcgtcctcgccgcgctacctccccagcggcgacgacgccctgtaccgctgctcctcccccttcagccccagcttcgggttctcctcgccgtcgccgctagccacctccgtctcgctctcgccgtcctcctccgcctccctcgtcgatgacggcgacgacggaggagcggccgccgacgccacggggcagcggctccagctcgcgcgcctcgcgctgcagtaccaggaggtggccgaccgctacgagctttgcctctcccacctcgccgaggccgccgaagaggcggcggcgctccgtcttgagaacgccgagctccgcgtcaccaacagcgacctcgccctccgtctcgcgctgctcagcgggaagcataccgccgccgtcgccgtcgccgacgagatccgtcggctccgcctcggcgagcagaaggtcgcggccgccaccaaggagcgcacgcccgagaagctcgccgtgctgccgaagagcatctccgtgcggtccacaagctacctcaagctgaaccagcaatcccaggccgccaccgccacttcggcggcccccaaccgcaagccccgcacgtcgtcgaacccaaccaaccccccgaactcgcagcgcgcgtacgacggcggcaagaaaggcgacgagcagaaggcgcaacccgcggacagcggcgcggagctggaggtgtacaaccagggcatgttcaagacggagctgtgcaacaagtgggaggagacgggagactgcccctacggcgaccagtgccagttcgcgcacggcgtcaccgagctccgccccgtcatccgccaccctcgctacaagaccgcggtgtgccgcatggtgctcgccggcgacgtctgcccctacggccaccgttgccacttccgccactcgctcacccccgccgaacgcctcctcctccgatcctag</cdnaseq>

Protein Sequence

<aaseq>LRSALPREEALVSPVRSALELKPFNFGDQRLASSPRYLPSGDDA LYRCSSPFSPSFGFSSPSPLATSVSLSPSSSASLVDDGDDGGAAADATGQRLQLARLA LQYQEVADRYELCLSHLAEAAEEAAALRLENAELRVTNSDLALRLALLSGKHTAAVAV ADEIRRLRLGEQKVAAATKERTPEKLAVLPKSISVRSTSYLKLNQQSQAATATSAAPN RKPRTSSNPTNPPNSQRAYDGGKKGDEQKAQPADSGAELEVYNQGMFKTELCNKWEET GDCPYGDQCQFAHGVTELRPVIRHPRYKTAVCRMVLAGDVCPYGHRCHFRHSLTPAER LLLRS</aaseq>

Gene Sequence

<dnaseqindica>1018..1338#252..926#44..67#aacctcctccgtcgtcctctcccccgaatcagctggtctctagcttcgatcggcactgccccgagaggtaattgcatcgaattactcctccacttgatcaggtccaacattacaagctcgatcgatacaacagctaggaatttcacgtgtgcacttgttcgtaccaagttgtgtgaaaatttttcacgtttgtgacattttccgtccgtttgttcgcggcggaagtcaattggtgtccgtcggcaatgcaggaagcgcttgtctccccggtgcgctcggcattggagctcaagccgttcaacttcggagaccagcggctcgcgtcctcgccgcgctacctccccagcggcgacgacgccctgtaccgctgctcctcccccttcagccccagcttcgggttctcctcgccgtcgccgctagccacctccgtctcgctctcgccgtcctcctccgcctccctcgtcgatgacggcgacgacggaggagcggccgccgacgccacggggcagcggctccagctcgcgcgcctcgcgctgcagtaccaggaggtggccgaccgctacgagctttgcctctcccacctcgccgaggccgccgaagaggcggcggcgctccgtcttgagaacgccgagctccgcgtcaccaacagcgacctcgccctccgtctcgcgctgctcagcgggaagcataccgccgccgtcgccgtcgccgacgagatccgtcggctccgcctcggcgagcagaaggtcgcggccgccaccaaggagcgcacgcccgagaagctcgccgtgctgccgaagagcatctccgtgcggtccacaagctacctcaagctgaaccagcaatcccaggccgccaccgccacttcggcggcccccaaccgcaagccccgcacgtcgtcgaacccaaccaaccccccgaactcggtgagtcccccgctctcgcctcgcgaacaccacggctcagcccgtttgatcggcatttgacattgttgcgcaccactatcaaatcatgcagcagcgcgcgtacgacggcggcaagaaaggcgacgagcagaaggcgcaacccgcggacagcggcgcggagctggaggtgtacaaccagggcatgttcaagacggagctgtgcaacaagtgggaggagacgggagactgcccctacggcgaccagtgccagttcgcgcacggcgtcaccgagctccgccccgtcatccgccaccctcgctacaagaccgcggtgtgccgcatggtgctcgccggcgacgtctgcccctacggccaccgttgccacttccgccactcgctcacccccgccgaacgcctcctcctccgatcctagctaaattaaggcagtgcgcggccagtcttttgcaccacctggatggtttattgctttcgcatgtatactatatacgattatacacacgaaaatgtacaaaaatacgaacatcgtaaataacacataagaggtacgtacagggtacaggaagccatatggtagagctagtagcaccgatattgtaatgtgaatatccacaaacaggattagtgttttcgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0645000, RefSeq:Os01g0645000