Os01g0646700

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Revision as of 04:51, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0646700| Description = Conserved hypothetical protein| Version = NM_001185553.1 GI:297720240 GeneID:9269692| Length = 5795 bp| Definition ...")
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Gene Name

Os01g0646700

Description

Conserved hypothetical protein

Version

NM_001185553.1 GI:297720240 GeneID:9269692

Length

5795 bp

Definition

Oryza sativa Japonica Group Os01g0646700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:27821790..27827584

Sequence Coding Region

27821790..27822217,27822301..27822358

Expression

GEO Profiles:Os01g0646700

Genome Context

<gbrowseImage1> name=NC_008394:27821790..27827584 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:27821790..27827584 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggattccttcatggatgatgactccgacgatgaatactacatgtttgctgggctaggcgacgatgaggatgacgagatggtacaatctgatgacgatgacacgcaatcaccgacctcttctgttcctgatccgtatgactatatgtacagcaacattccacaaagcacaaatgttctgaagcctgaacctgactgtaaacactgtggtgccaagaggttccagtacgaaccgccgagcttctgttgtcggggtggcaagatcaagcttgtacaaaatgaaacacctcctgaactgatgaggctttggacaagctcggatccagacgccaagcatttccgtgataacaatagatacttcaacggccacttctcattcactacccttggtgtaagccttgacaaggcctttgcaaacatgagttcgggcgtgtacacttttcgggctcatggtcagatatatcataatatacattctttcagtcct</cdnaseq>

Protein Sequence

<aaseq>MDSFMDDDSDDEYYMFAGLGDDEDDEMVQSDDDDTQSPTSSVPD PYDYMYSNIPQSTNVLKPEPDCKHCGAKRFQYEPPSFCCRGGKIKLVQNETPPELMRL WTSSDPDAKHFRDNNRYFNGHFSFTTLGVSLDKAFANMSSGVYTFRAHGQIYHNIHSF SP</aaseq>

Gene Sequence

<dnaseqindica>5368..5795#5227..5284#gtttctctccccctcaacaacctccaacgccgcacgcccgcaccctaatcgccgcccgcgccgtctcccacctcgccggtgtcctccgcgccgcccccaatctccgacttgtcgaccgcctccgcgtgtgccgacggcttcgccgccaccgatccggagtcgcctgagtcgtcgtcgcccccccccccccaccccaagccgatctcccacacccgcgccacctcccccatcgctgtttcatccatcttctcgtggtcgcctccgcgctatatcgcccgccgccccgcctcctctgcttcgacgcttatcccctcagccgccacctccgccgcggtcatcgacatcatcttcccgagcgcctgaggaaagggattcacgccgctacaatgccgagaccgagcggagaggtggtttgaggccagtagagctgtacggcaagttttctcttttgttgtctttcaatctcttctcccttccgatttgattttgattgtgatgagcaaactattttgacttatactacccaattgattttgattgcgatgaacgagtaaagctattttgcccatgcacatgaggtgttcgattgaatgccgcagaaacaatctgccactctgttcatggaaaaactttagaatccagtgtcaaaatccccaatgatatagtgaatcacaccctgctcatccagcatcggcttctttaacccagtaaaatgcattttaacaaccactgacggattattttgtgctgtccatagttccgatagagcaatcagttttgatcttgtaaattgtaagcacctaatttggagttcgacagctggcaacggcatgttttgtcagggtacccgtcgccaggacgccgccgacgccttacacggtgactgcttctcactgccactgatcctttctcggtcccacggcacggctgaggctgtggaatctagcaatcgatccgtattcttttaaactatatgctactgtatgtgtgcaggtggttattgatctccacgccttggcctacagcaatggacaacgctgttgggatccctaaactcatgatttgtatctaataacaggtaatgactaatgacacttcaaattgctcttcagcttttgcatccgatgtaatcacttttctgttgagtcacatccaatacttattagatgctaataaactaaatctgtatgacaacaattacagattgactcatctaattttctgacagtagatgtgctgacgttcctatattgcagttgaatttaacttcagaatattgctgccagcttccggcctcctcaacatcagatcagtgtttcaggtgtgtgtgtctcatttaaattagtcttcttttcctggtttgaaatttccgctttgcaaatggcacgagaattttaagtatacgtcagtgtcgatgaatttctcaaaacaaaaaaaagaactccagttcagtctgcattgcgtggtgatgcataacacacaatagcaagaggtttgctctgagagtcacaacgtcagtacacacatggatggtgaaaaaacactgataatttccctctgttatcctgaaagtaattttgaaccaatataaggatctggccacatgcatcgaagaggagtaaatgtgttattatgtgggatcctggcagtttttttttttgggctatcagattagagaaagcaaatattaaatgggggcaaatactagatgtttgatatcctatggtacaacattctcacaaattacaattaagaagtatcaatctcgatgagaaacagtgtaaatatatgtaataaatattgatatcaacgccattgtgaattattttgtgtgtcatggatatatgcattatataccatattattatgcattatgcattacttggaggctcttctttgcaccctcgtccgcctgtgagtcaatccttcacgccggtggcctcatcttccccacatctgtatgggtgaatatttaggggattgaattttgggtgattgttggataggataggataagtttcatttggtttgtgagtcgatccttcacgccggtggcctcatcttccccacatctatatgggtgaatattttaggggattgaaattttggtggctgttggataggataggataaggtacatttggtttatgtttagtgataggacgtaccggttggtcagatactgttatatacattttgcttatcatgaaggcaatccctttttattgcatttcagaatgaagcttcatcttacactgggtttctctgatttataatttatcatttaatttttcagcatttgattgaatttcttacattgggtttccaacaagtcgtcgtcgattactcgtcgtctggtccccttcgcgcctcctcgcccccacgccgctagccaggtaaacatctctccctccccttcccattccttcgttaattgcaaggttccccctccccccagatcgccatattcttctctcggggtgcagtgtgagatcaattaagaagaatcagcactgtctaggctagctcactgctgtttcattctctgttttctcattctatgtctaatttatcttcttgtaggctacagccatcctggtgtttttagtgctgcacctctctatatatatcctttctaggtaaattttaacccctaatgttcactttccccgagaaaatccaattttgttgctttaatttcaggtagtatataacctggttttacagtttataaactgatgcttcttgtgggatgtcatgtctctgattaatttattttttaacatatgcaccaaatatatgtctgttactgccacacatgttttatattggattcagtaaatatctcctattacttttcactgccatcactctaggaatattacactctccaacgatatatatctgagttgtgaagttactggttttacatgtctgtgtctgagttgtgaagttactgatgaaaacatccagactcaatgaagtgtgattactgcatttaggcggtctgatgtgttttgtttttcagaaatggataagattgttgggggctccacaacatcaactacaaaatcaggttagctatgtgcatgttattaactcgaatgtaaactctttgcatgctaatttcacccatgtgttcctttcttaggccctcttgctgacataaccaatataagtggttccggtttggcaaattgacggggcaaggttggaaacaagtcgttacgtgccgttgaaagatacgacgagaattgtgatgtctttacaaataacactcccaactgcttcaaatggtatcttttacatattgcttgtttcctattttaattcaatctcaatctgtatccaccaacaccaatgtgatgagtataaacttgtgatgctggccatgaagttgtgcatcctgtggtgacgcctaatagtcatccatgtgcggaaaaccgcgatgcgtccttcaatacacccagcaatgtgcatatgtgtacaggtttgcatgaagatgttagtcaccttagtgtggctgaactaaaaagaaagcgtgctagagaccggtacgcagcattgaccccagagcaaaaagatgataggaacaagaaggcacgtgaaagaaggaaaagaaagaaggaggaaactcaagtttcaggtacaactgtaatatttatctgtacaaattaaaatatgtctggccaattatgcgaaacaatattataaattctcgtcgtgtgaacagccccacttggcgatatttcaaatataagcgctgttgatataatgaagtgccaattggaagtgactgattcttccccgctgcatcaaggaagtaatgtctttattgtttgtacagtttggttgaacaatatattattcgactgaatggaaattgatagttctatgtttaaatagaaagtgaagcttcccatcttaatatcacaccaagacgtctcccatttacaatcatcaacaatgtagctcactatggtcccaacgaagtaccaatgagtcgcttcactcaaagtacctaaacatgaatacttctgactttgtagttgataattcaggtatgctaatatctttttattaatgggattacaatgctgttgccatttataaatttctatattacaatatatattactgactatgttacaacaggatgtgaaaatcaatatgaatccagtttttttgaaggcagcgatcaaaatgagtgcgaccacgatgacgacatctctctaggtaacacattttacttcatcacatgttttttttatataaacttgtcaaacataaaacctctttgcttacatatgagaagtgcgctaagttagttattattatctattcatgtttgtacaatttaatatttgaagtgagcaaacaatcccataaatctactcatgatgatgttggcacatcactagataatgaattggtgcgtgcgccaaccaatgagacaaaagaacgattgcagtcaaagctagctcgagctagggagaagtatgcaactcttacaccggagcaaaagcaagctaaggtggaccaacggagaacacaacgtcaatcactaacaaaagaacagagactagagttgaatgcccgtcgtagggttgcaaggcaatctatgccagatgtggaaatccatgatatgaatgcttgccgtagatcaagacgacaaaatgttactcctggggaaagatctgctcatctggcacgacgtaacgcactctatgcagctaggcgtgacaaaccatgcgctgaatccattgcactagagtgccctgagggatctatcccattgttgctaaatccaacgccttgcttggaaacaaccggtgatgtgccatctacatcgagcctgcaaactgagcatgctgtagatcatcaggcgcgatcatgcacattcaatgatggtatcatctatatatgttttcattcgtactcgcaatttgggggaatttaactatattccacttttagatttggcaactatccaaatgcccttcttaagtttgctcttaattttttgcccctcttagatggtggcttcttaactatttgtcactgttggccatgtggcaatccatggcaaaagtgccaattagttaagaaacgtaacaagggaatttggataactgccaaacctaaaagtggcaattagttaaattcccctataatttgtacccttccgcatactaacttctcatatctcattgtactaaagatgatatggattccttcatggatgatgactccgacgatgaatactacatgtttgctgggctaggtatcgtcgtcgtgatatcttaatgtctctttcacatgtataatttttgcggactataaatcctttgcgctaaaccataccaggcgacgatgaggatgacgagatggtacaatctgatgacgatgacacgcaatcaccgacctcttctgttcctgatccgtatgactatatgtacagcaacattccacaaagcacaaatgttctgaagcctgaacctgactgtaaacactgtggtgccaagaggttccagtacgaaccgccgagcttctgttgtcggggtggcaagatcaagcttgtacaaaatgaaacacctcctgaactgatgaggctttggacaagctcggatccagacgccaagcatttccgtgataacaatagatacttcaacggccacttctcattcactacccttggtgtaagccttgacaaggcctttgcaaacatgagttcgggcgtgtacacttttcgggctcatggtcagatatatcataatatacattctttcagtcct</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0646700, RefSeq:Os01g0646700