Os01g0647700

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Revision as of 04:51, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0647700| Description = Epoxide hydrolase family protein| Version = NM_001050246.1 GI:115438862 GeneID:4326243| Length = 4254 bp| Definitio...")
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Gene Name

Os01g0647700

Description

Epoxide hydrolase family protein

Version

NM_001050246.1 GI:115438862 GeneID:4326243

Length

4254 bp

Definition

Oryza sativa Japonica Group Os01g0647700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:27862682..27866935

Sequence Coding Region

27863015..27863282,27863821..27864128,27864271..27864987,27865476..27865604,27865732..27865935
,27866240..27866440,27866575..27866700

Expression

GEO Profiles:Os01g0647700

Genome Context

<gbrowseImage1> name=NC_008394:27862682..27866935 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:27862682..27866935 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcgggagggaaggggtgggtggagagggcgcggcgcggggtgaagacggcgtggttcatggtggccatggtggcgtcgctgctgatggcgtcggcgccggcgctggtggccgccggcgacgtggccgtcgcgctgtggctcgaggtgcggctcgggtgcctccgctgccacggcctgcgcggccacctcgagcgttacggcttccggagctcgctcgtggacataccgcttgtctccatcgctcgatccgtcgtcattacctgtgtatacctcatgtctgatgcttctgggctctcccatggcccgtaccttggaacagcaacttgctgttccctggcttctctgctcatcttgttgattaaggccagcgtttacagtccggcgcaggagattgggcctgagctctcgccgtcattggcggatcacaagctcagtctcaagaagctatcgggaatgccggtgcttttcctgtcctccttggtctttgctcttggccatgttgttgtcgcttacaggacaagctgcagggctcggcggaagctgcttatccatggcattgaccctgaatctattctggcatacaagaatgcatatcctggatgctacaagactcctcgatctcccacaccatacagtggaaaattttattctaggagtgacagtgagacgaagagaaaatctgttgctcacgacgatagggatattccaatcagtttccttgcagacggtgatagcatgttcattgcttgccaggggatcactgtgcattacaaactttccgatccatcgagttgcatatcttcagctacagacacttttccagaaatccatcatgatgttatttcagcaagcatttctcctagaagacagagacatgatagcccaccatcagcctccactaatacccgtcgtcttttgaataggagcttcagccatcaataccatcagacatcgctatatgcaccattgttggtagagccagtgacctctccaactttgtcggatgacacccctgttcttagtgttgatgatggcagtgctgatgtatgtttgaaacctatgggatttgatcttgaggctggagaacaggggaaatttgctgttgttttggtgcatgggtttggaggtggggtgttctcatggagacacgttacaaatttgctttctcgtcaagtgggttgcactgtgctggccttcgatcgccctggatgggggttaacatctcgacctcgcagaaaggattgggaagacaaaaatctaccaaatccatatgagcttggatctcaggttgatcttcttatttcattttgctcggacatgggcttacgctctgtggttttagttggtcatgatgatgggggcctgcttgccctaaaagctgcagaaaagttgcgagcatctggagattcaagaaaggttgaagtgaagggagttgtgcttataggtgtaagcttatcaagagaagtcattcctgcatttgctcgtatactcctgcatacccctctaaggaaaaagcacatggtacggccactgttacgtactgaaatcactcaggtgatcaatagacgtgcatggtttgatgctaccaagttaacaacagatgttctgaacctctacaaggctccactatttgttgaaggctgggatgaagctctccatgaagtaggacgtctttctttctcgactgtcctatcatcaaaaagagcagcagatttactaagatcagtggaagacctccctgttctggttgtagcaggctctgaggatgctcttgtttcttcgaagtcaacgcaagtaatggcttcaaggcttgtaaattctaggctggtaacgatatcaaattgtgggcatttgccacatgaggagtgtcccaaggcattgctttcggctctttctccattcatatcaggactggtgtcatcagatgattcattgcaaagattgtag</cdnaseq>

Protein Sequence

<aaseq>MAAGGKGWVERARRGVKTAWFMVAMVASLLMASAPALVAAGDVA VALWLEVRLGCLRCHGLRGHLERYGFRSSLVDIPLVSIARSVVITCVYLMSDASGLSH GPYLGTATCCSLASLLILLIKASVYSPAQEIGPELSPSLADHKLSLKKLSGMPVLFLS SLVFALGHVVVAYRTSCRARRKLLIHGIDPESILAYKNAYPGCYKTPRSPTPYSGKFY SRSDSETKRKSVAHDDRDIPISFLADGDSMFIACQGITVHYKLSDPSSCISSATDTFP EIHHDVISASISPRRQRHDSPPSASTNTRRLLNRSFSHQYHQTSLYAPLLVEPVTSPT LSDDTPVLSVDDGSADVCLKPMGFDLEAGEQGKFAVVLVHGFGGGVFSWRHVTNLLSR QVGCTVLAFDRPGWGLTSRPRRKDWEDKNLPNPYELGSQVDLLISFCSDMGLRSVVLV GHDDGGLLALKAAEKLRASGDSRKVEVKGVVLIGVSLSREVIPAFARILLHTPLRKKH MVRPLLRTEITQVINRRAWFDATKLTTDVLNLYKAPLFVEGWDEALHEVGRLSFSTVL SSKRAADLLRSVEDLPVLVVAGSEDALVSSKSTQVMASRLVNSRLVTISNCGHLPHEE CPKALLSALSPFISGLVSSDDSLQRL</aaseq>

Gene Sequence

<dnaseqindica>334..601#1140..1447#1590..2306#2795..2923#3051..3254#3559..3759#3894..4019#actactagcggacacaaagccccactaaagtattcattcgttcacaattcacaagccgtcaagcactgtgccattatccccaataagtagtactccaccacgccttctctcttcttcctctcctctcctctcctccgcttcacctccgtttctttcatcgtctatctctttctccccaacacagcgggcgaaccaaatccgtcgtctcgccggggtccgggaccacctcgtcgcatgcgcgctgggtcgtagacttggccgccggcgatcgccggagttggggagcgcggcggcggcggttccgctctcgccggagcgaggggtgggtggaggatggcggcgggagggaaggggtgggtggagagggcgcggcgcggggtgaagacggcgtggttcatggtggccatggtggcgtcgctgctgatggcgtcggcgccggcgctggtggccgccggcgacgtggccgtcgcgctgtggctcgaggtgcggctcgggtgcctccgctgccacggcctgcgcggccacctcgagcgttacggcttccggagctcgctcgtggacataccgcttgtctccatcgctcgatccgtcgtcattacctgtaagcagcgactagctccccctcattgctgttctaatgcgctcgcaggatattggggaatctgttcgtatgagttggatttcttttcatcttctgagaatttttgtattggttatgtgtgttatttttttaaatattctaatttcattatattttgggatatgggatttccctcaagattctttatttttttcccttttcgtatggggatttgtccatctgaaagctacagttcttgctacgtccgtgcttgtcttcattcgtagacgaaaggatgaaaactttcgtgaaaaaaaccgtgtctatttctaaagctattaatctgatttcgtatctgttgcctgctattcttttcactttccgtatttgaattcagttaaatcccgtcatttgattcgctgaattagtaatagatttgctgaatctgttgcctactatttcccggcagtttgaagtgcgcgccaacaaatttccgcactcggatttggggagaaaaactacgagatgcgactaacagatccgatgtttgctcgtgcaggtgtatacctcatgtctgatgcttctgggctctcccatggcccgtaccttggaacagcaacttgctgttccctggcttctctgctcatcttgttgattaaggccagcgtttacagtccggcgcaggagattgggcctgagctctcgccgtcattggcggatcacaagctcagtctcaagaagctatcgggaatgccggtgcttttcctgtcctccttggtctttgctcttggccatgttgttgtcgcttacaggacaagctgcagggctcggcggaagctgcttatccatggcattgaccctgaatctgtatgacttacatccgtttgccttctaaatctcactaagtgatcaattgtagaaacagggccatgtatgctagtattttcttgcatccgttgtgcttttcttttgcaatgtttgatgttttcgtgggttgtgctgctttcagattctggcatacaagaatgcatatcctggatgctacaagactcctcgatctcccacaccatacagtggaaaattttattctaggagtgacagtgagacgaagagaaaatctgttgctcacgacgatagggatattccaatcagtttccttgcagacggtgatagcatgttcattgcttgccaggggatcactgtgcattacaaactttccgatccatcgagttgcatatcttcagctacagacacttttccagaaatccatcatgatgttatttcagcaagcatttctcctagaagacagagacatgatagcccaccatcagcctccactaatacccgtcgtcttttgaataggagcttcagccatcaataccatcagacatcgctatatgcaccattgttggtagagccagtgacctctccaactttgtcggatgacacccctgttcttagtgttgatgatggcagtgctgatgtatgtttgaaacctatgggatttgatcttgaggctggagaacaggggaaatttgctgttgttttggtgcatgggtttggaggtggggtgttctcatggagacacgttacaaatttgctttctcgtcaagtgggttgcactgtgctggccttcgatcgccctggatgggggttaacatctcgacctcgcagaaaggattgggaagacaaaaatctaccaaatccatatgagcttggatctcaggtgattcttcttaccatatactagattgcgcactgcccaatagcagcaagtgcttgcagcacttgccctaatgttctttgcactagctactagatatgttgcaatatcccatactcattccatggaatttgttataagcatgactgactgaatgtaaatatgttactgcatgtgttttctcttagaactatacttatctttgggattatgtcttctatgtaccataattctgtgtgacaacagcttttccattacaaatagttgagtacaatcttctgaagttcttttttttccttaggtacatcctatcttacaaatattcatctaagggaatgctcttctactgtaacaactattaatcttttaattaatattactatatccagttatgtttgcaacatattttccggcagcattaacgctatatttcttcgctgtacttggaaaactcagaactttaagaacaacgctttgtatgccttctgcaggttgatcttcttatttcattttgctcggacatgggcttacgctctgtggttttagttggtcatgatgatgggggcctgcttgccctaaaagctgcagaaaagttgcgagcatctggagattcaagaaaggtaactgccttgtgaccttctgttcatttttcttttgtgaactttagtagcttatcagactgtttgcttgatgaaagtctatccttctggtaataatcattttaaatgcctccttgttttttcttaggttgaagtgaagggagttgtgcttataggtgtaagcttatcaagagaagtcattcctgcatttgctcgtatactcctgcatacccctctaaggaaaaagcacatggtacggccactgttacgtactgaaatcactcaggtgatcaatagacgtgcatggtttgatgctaccaagttaacaacagatgttctgaacctctacaaggtacacacttttaataattttcattcccttcagtgtgttgtcaaaccattagtacgcaatctatctctggaagagtttggtcactaaaagcacatagggagcgttatatcatttgcaaataatctatttatcattccaccacatattgtctgaatgcaaggaaagtggaacttttcttgcatgttgttagttatttattgtcttcctgttccttgatgctaaattaaatgttttaacatgcatcctttcacttattctgtgaacatgaactacgaactgacttgaaatgggtttttacatttaggctccactatttgttgaaggctgggatgaagctctccatgaagtaggacgtctttctttctcgactgtcctatcatcaaaaagagcagcagatttactaagatcagtggaagacctccctgttctggttgtagcaggctctgaggatgctcttgtttcttcgaagtcaacgcaagtaatggcttcaaggcttgtaaattctgtaagtaatcttgagtccctttgcctcagtatagtgaatctgcttctgaagaggactcttgcatgatactctatattacttccctgttagggttactccatacattgtgccaatgagttcttgttattttgcagaggctggtaacgatatcaaattgtgggcatttgccacatgaggagtgtcccaaggcattgctttcggctctttctccattcatatcaggactggtgtcatcagatgattcattgcaaagattgtagcatactagttcttttcgttttgccttttgccctgtctttctgtcctctacactgagtagatctctctagttggtgtgagtttgtgtgagccaatgtagtgcagtagtggagcctgacccaaaatctcaagggttcctagagctcctctaattttttgccccatataatgatacctccgaatgatttcaattaagcaagttgaatctgtacagcacaggcttgctgtgttcagttc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0647700, RefSeq:Os01g0647700