Os01g0649100

From RiceWiki
Revision as of 04:51, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0649100| Description = Malate dehydrogenase| Version = NM_001050252.1 GI:115438874 GeneID:4326249| Length = 3650 bp| Definition = Oryza sa...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0649100

Description

Malate dehydrogenase

Version

NM_001050252.1 GI:115438874 GeneID:4326249

Length

3650 bp

Definition

Oryza sativa Japonica Group Os01g0649100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:27946600..27950249

Sequence Coding Region

27946730..27946966,27947072..27947245,27947729..27947897,27948001..27948062,27948644..27948768
,27948873..27948990,27949898..27950035

Expression

GEO Profiles:Os01g0649100

Genome Context

<gbrowseImage1> name=NC_008394:27946600..27950249 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:27946600..27950249 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggccgtcgctgatgagatccgcctcgcaggtcctccgccgccgccgcggctactcctccgcctccggccagccggagcggaaggtcgccatcctcggcgcggccggcggcatcgggcagccgctctccctcctcatgaagctgaacccgctcgtctcctccctctccctctacgatatcgccggcacccccggcgtcgccgccgacgtctcccacatcaacgccccggcccaggtgaaggggttcatgggggatgaccagctcggggaggcgttggaggggtcggacatcgtgatcatcccggccggcgtgccgaggaagcccggcatgaccagggacgacctcttcaacatcaacgccggcatcgttaagaacctctgcaccgccattgccaagtactgcccgaatgctcttgtcaacatgatcagcaacccagtgaattcaacggtcccaattgctgccgaggttttcaagaaggctgggacttacgatgagaagaagttgtttggtgtgactactcttgatgttgttcgtgctaagactttctatgctggaaaggccaatgtaccagttactgatgtgaatgtcccagttgttggtggtcatgcgggtatcaccatcctgccactgttctcacaggcaactcctgcaactaatgcgttgtctgatgaagacatcaaggctcttaccaagagaacacaggatggtgggactgaagttgttgaagcaaaggctggaaagggctctgcaaccttgtccatggcgtatgctggtgctgttttcgcaaatgcttgcttaaagggtctgaatggagtgccggacgttgttgaatgctcttttgtgcaatcaactgtaacagagctgccattctttgcctccaaggtgaagcttgggaagaatggagttgaggaagttcttgggttgggccagctgtcagactttgagaaggaaggactggagaatcttaagggcgagctcaaggcttcaattgagaagggtatcaaatttgcaaatgcgtag</cdnaseq>

Protein Sequence

<aaseq>MRPSLMRSASQVLRRRRGYSSASGQPERKVAILGAAGGIGQPLS LLMKLNPLVSSLSLYDIAGTPGVAADVSHINAPAQVKGFMGDDQLGEALEGSDIVIIP AGVPRKPGMTRDDLFNINAGIVKNLCTAIAKYCPNALVNMISNPVNSTVPIAAEVFKK AGTYDEKKLFGVTTLDVVRAKTFYAGKANVPVTDVNVPVVGGHAGITILPLFSQATPA TNALSDEDIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFANACLKGLNGVPDV VECSFVQSTVTELPFFASKVKLGKNGVEEVLGLGQLSDFEKEGLENLKGELKASIEKG IKFANA</aaseq>

Gene Sequence

<dnaseqindica>131..367#473..646#1130..1298#1402..1463#2045..2169#2274..2391#3299..3436#gtagatcccaatcccatccacatcccctttgctcgactacaaagtcacaccgctttgcattttcctctctctctccgcccttcgcctcctccaccgagtcagatctcgagcgccgcagaggagagcagcaatgaggccgtcgctgatgagatccgcctcgcaggtcctccgccgccgccgcggctactcctccgcctccggccagccggagcggaaggtcgccatcctcggcgcggccggcggcatcgggcagccgctctccctcctcatgaagctgaacccgctcgtctcctccctctccctctacgatatcgccggcacccccggcgtcgccgccgacgtctcccacatcaacgccccggcccaggtacctcccccgcgctctcatcgctcgccgtcccctcttcccgttccgccgggatctgtctaacgctgcgggcgcttgggttttgggggtttcggtttctcgcaggtgaaggggttcatgggggatgaccagctcggggaggcgttggaggggtcggacatcgtgatcatcccggccggcgtgccgaggaagcccggcatgaccagggacgacctcttcaacatcaacgccggcatcgttaagaacctctgcaccgccattgccaagtactgcccgaatgtaagatctctccctcactcgcagcactctggatctgcagctcttgtgcctgtagctcttgtggtcgcttgtgggtattgctcgctgcaattaggtctagtaacggaatcgtaaacatgatttgattagaggtgtgaaaaaagctgtactagattactgaaaaggcgccaaacttttccccagcacgcgtgtatcagcatccagcactcattgtatatctcttgttgaataatctggttccctggctgaatgctgataatttggtgcagcaattatttttatccccacgggtcatttattaacctggacaaatcagaagaatatcattgtttaccctgacttattgcttcttgttatctgcttatctttgataagttctatcaattttgttttcagtcttcgtatctttgaaactcatgcatgttcattggtattacatgcttaattaccaacacgttcattaaattcgttcatgtatattaggctcttgtcaacatgatcagcaacccagtgaattcaacggtcccaattgctgccgaggttttcaagaaggctgggacttacgatgagaagaagttgtttggtgtgactactcttgatgttgttcgtgctaagactttctatgctggaaaggccaatgtaccagttactggtaatgacctgagagtcacttgagtactgagaattgatatagtagggttttggtgttttttctctcttatcttctgttggatttgtttctccctttttggcagatgtgaatgtcccagttgttggtggtcatgcgggtatcaccatcctgccactgttctcacaggtatggattttgacttttgattaacataactcagaatgtcataccagtaggatccatatttacatatcataaaaataagattatcagattggtactccctccgtcccgaaataaccaaacctcgtaggacatgtcacatcctagtacgaggttggtttattttgggacggagggagtatgcctacaatatatatattttttgttatggcaccataatcatatcatgcatgctatggttaaaacatgctaacttaagaattactgttcatgtgttctcttattcttgtagtaaactgcacatgtttattatgataaaaaagttaataaccaagtttgttatattttctcgctcaaggttgacatagtttctgtataggaatcttttatctttatagaatcatcgctaacatagtctaatatgaagtgtacaatcattttttggattacaaataagaacacaaacatgaccaatatataagatataactgtgttattttggctgttcaaaaatatgaagcagatgatgcttttatgagctcataacttaacaatccaactgaaggaactctttatttgggtaggcaactcctgcaactaatgcgttgtctgatgaagacatcaaggctcttaccaagagaacacaggatggtgggactgaagttgttgaagcaaaggctggaaagggctctgcaaccttgtccatggcgtaagttaaaataaacataacagctgtgcagagtgaggaattagtgcttttatggctaatggtagtgcttttatccttactcatttgattctattgggggacaggtatgctggtgctgttttcgcaaatgcttgcttaaagggtctgaatggagtgccggacgttgttgaatgctcttttgtgcaatcaactgtaacagagctgccattctttgcctccaaggtacattttcttttcacaactttctttgtctgttgcagttgtgatctatatcatttggtggagtaaatctagagtatttgacattccttctcatcttaatgatatctcttttattctattcctcctttttctaatgtgcggctctagttttgtatgcatattgttttatttgcgtcctcctcttgctgtccaaaaatgttagaagatggacaggatcgaaccatgcaaattttttattgcatagaaagatatatattaatatactaaatcctatataatagtggttcttgtctctggttagattcctgtatcctgaatgattgtgtggttagatactttctttctttttttactttgcaattaatggttatacctcatttatggaattgctaccttattatatactttcagaatgtgttcattttattggctcatctattactatgaactgtggaagtgtgcattttggtgctctgattctatgaacctgagaccatccatgcaaatttagatattgtgcacggcatccgtgtactgctgcaaaagaagttacggttcatctggtttcctatattataggctggttactgtaaggctgttgcaaaagaagcattttttttttgtacaaaaggtcatacaaatgccctcaaatatgccatgccaaatctcatagcaaatcatgtatgcaaattgcagtaagatttcctgtggtttgctgctttgctttatgttgtgctcatggtgacattatttacatattacatagacgtagtgggtgcttagcctaacgtgaatgtgattctatcatctggtcatttcaaaactggtttttgctttagaaatcttcaatcagtaaactttatggtcaagctgctgaaatatttatgttccttcactgatgttacaggtgaagcttgggaagaatggagttgaggaagttcttgggttgggccagctgtcagactttgagaaggaaggactggagaatcttaagggcgagctcaaggcttcaattgagaagggtatcaaatttgcaaatgcgtagttaggccattttgcagactagcaactcatacctgtagatgaggcttctcttgatttgatttatgcttttttctaccccttgtgttgggataccgaggatttgagctttacaataagaatccggcggcctaatgccaaacagaacaaaacttgtacgagaggaactatttgtgtcaagttttgagttgttacattggacaaacattggattatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0649100, RefSeq:Os01g0649100