Os01g0652100

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Revision as of 04:51, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0652100| Description = Protein of unknown function DUF231, plant domain containing protein| Version = NM_001050271.1 GI:115438912 GeneID:432...")
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Gene Name

Os01g0652100

Description

Protein of unknown function DUF231, plant domain containing protein

Version

NM_001050271.1 GI:115438912 GeneID:4325373

Length

5704 bp

Definition

Oryza sativa Japonica Group Os01g0652100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:28124244..28129947

Sequence Coding Region

28125658..28125949,28126055..28126213,28126296..28126468,28129227..28129398,28129500..28129882

Expression

GEO Profiles:Os01g0652100

Genome Context

<gbrowseImage1> name=NC_008394:28124244..28129947 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:28124244..28129947 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgccaagacagcggctgtcattccgccgcctcgtcctcctcctcgtcgcctccaccgccctcgcgtgctcggtgctcgcgggcggcgccgtggcgagcgtggtcgagacgctcggcgtccggcgtcacttcggcagcccgaagcgcaacaccacggggcagcacggggccggccggcgccgcggcggcggctccgcccggagcggtctggcgtcgtgcaacatgttccagggaagctgggtgtacgacgactcgctgccgatgtacgacacggcgggctgccccttcgtggaggcggagttcgactgccagaagtacggccgccccgacaagctctacctcaagtaccggtggcgtcccagctcgtgcgagctcccgaggttcaacgggctggatttcctcagcaaatggagggggaagaagatactgttcgtgggggattccatcagcctgaaccagtgggagtcgctggcgtgcatgctgcacgcggccgcgccgtcctccaggaccacctacagcaggggcaccccgttctccaccgtcacgttccaggactacggggtgtcggtggcgtactaccggagcacctacctggtggacatcgtcgacgagtccatcggccgcgtgctgaagctcgactccatctccggcgacgcgtggctcggcgccgacatgctcatcttcaacacctggcactggtggacccacaccggcagagaccagccatgggactttgtgcaagatggaggccaggtgatgaaggacatggaccggctctcggccttctccaaggggatgtctacatgggccagatgggtcgattcgaacgtggacacatccaagaccagggtctacttccagggcatctctccaacccactacaacggagcggactggggggaggggtcgaggagctgcgcgcagcagacgcagccggtggcggggtcggcgtacccggcggggccggtgccggcgcagagcgcggtgaggagcgcgatcgccggcatgtcgaagccggtgttcctgctcgacatcacgctgctgtcgcagctgaggagggacgggcacccgtcggggtacagcggcggccacccgggcaacgactgcagccactggtgcctcgccggcgtgccggacgcatggaaccagatcctgtacgcctcgctccttgcatag</cdnaseq>

Protein Sequence

<aaseq>MAPRQRLSFRRLVLLLVASTALACSVLAGGAVASVVETLGVRRH FGSPKRNTTGQHGAGRRRGGGSARSGLASCNMFQGSWVYDDSLPMYDTAGCPFVEAEF DCQKYGRPDKLYLKYRWRPSSCELPRFNGLDFLSKWRGKKILFVGDSISLNQWESLAC MLHAAAPSSRTTYSRGTPFSTVTFQDYGVSVAYYRSTYLVDIVDESIGRVLKLDSISG DAWLGADMLIFNTWHWWTHTGRDQPWDFVQDGGQVMKDMDRLSAFSKGMSTWARWVDS NVDTSKTRVYFQGISPTHYNGADWGEGSRSCAQQTQPVAGSAYPAGPVPAQSAVRSAI AGMSKPVFLLDITLLSQLRRDGHPSGYSGGHPGNDCSHWCLAGVPDAWNQILYASLLA </aaseq>

Gene Sequence

<dnaseqindica>3999..4290#3735..3893#3480..3652#550..721#66..448#actggctcactgcctcccctcgtccgtccccagttcgtcacccttcatctccacagcgccagacaatggcgccaagacagcggctgtcattccgccgcctcgtcctcctcctcgtcgcctccaccgccctcgcgtgctcggtgctcgcgggcggcgccgtggcgagcgtggtcgagacgctcggcgtccggcgtcacttcggcagcccgaagcgcaacaccacggggcagcacggggccggccggcgccgcggcggcggctccgcccggagcggtctggcgtcgtgcaacatgttccagggaagctgggtgtacgacgactcgctgccgatgtacgacacggcgggctgccccttcgtggaggcggagttcgactgccagaagtacggccgccccgacaagctctacctcaagtaccggtggcgtcccagctcgtgcgagctcccgaggtaacatacgcagccgcgaccgcgagagcgcccaattgatcgatcgaccgagctagctgcagcggtttgcgttaatggcgtatcgaccattggcactgcaggttcaacgggctggatttcctcagcaaatggagggggaagaagatactgttcgtgggggattccatcagcctgaaccagtgggagtcgctggcgtgcatgctgcacgcggccgcgccgtcctccaggaccacctacagcaggggcaccccgttctccaccgtcacgttccaggtacgtacatgcgccttgcccacatatggtacttcttactactatcagttgtcctcttgccgtcccttgcatagcgtaagcacaaaacgaaagtactaccacctcggtacagttccttttcttttctcatttattttggcgaggcagatctaactccctggcacggctcagacattccatcttccaagtgtagcagtagtaaacctttttggcgaaagggaacggccgcaagcttactatttaaattatgaccccataatgggcagccacacgctttcagaaaagaggtcggattgtctcgcgcactcgtgctatatacccttttggtgccccccggccgctgcccgccggagcgcgcggcgtgtttcgtcttcgcgcggcgaggcaatagtgtacgctaacgctagtgccgtttccgcccactagctcttgcctgcctgcccgtcccaacgcgcgcgcgcgcttgcttgcgcgtcacatggcttgcgcctgcgcgcgcgcgaccgcgagttggcgatggcggggcggcagaaacgggggaaatcgtatcgtgggtgggttggttttgctcgctggttggctcccgtggggggttgggggcggtgggaaccggacgccatgggagacagcgcagagcgtcgtgcgcgtccttatccgaccagtgaatcgccgccgtctccttccggtccctttttaagcttgacgtttttctaatcggtcttcttaccccgtcccgtgatctcgatacactggcaagagtcaaactgttctccaaatgcagtacctgttccctttttttttggggacaaagaaaaaagattccagtggggtcgagacaatcatcggcacgtgagaagcgaaagtcctctggtagattagatttgtgttcgctagtcacatttttgttagtcggtctatcaaagtaatcgatggttagggagtgaccagtttgcagaaatctcgtgtagtaccttgacaccttaaggtcgctgcacgtattctgtagcgtggattactcaatgggccaacttgctcggatggtcggattgtacaagtacatctaaggttggaatgtgcaattgttactttcgaggaactttttctgtaagaaaccaattttcgaggatatctgcaattcccatgttttgtacacgagcttaggatgtgtcagtttcgatttgaggtactactgtacaaaacttaacttttgcacttttgctgtgggttttctgtccatgttattcctagaatcaacagagagattcaactccgaaaccaagttgtaaataaagagcaaagttcatacgggttcatgcttcttctgatcttatccagtcggggttggatagtactcctgctttcatgatgtcctttttgggcagcttaatataaataggtgcataacacggctcgtctcacaattacaattattttcacaaagctagctagtgccaccaaccatataactgtacattctattatatcgttaaccaaaacggtttggtccaacaaattaggcaacgcattaaaactctcaagaagatcgagagctcgtttaaagccgtccgatcgttcgggagccggttccttgcaacagacgtcgactactagcaagcactgcggttgatctccacaactcaaccacttcgtactagccagcagagtgtactaggctctgctcgttcatgccaatggcctcatggctgtgagcaactgctacctccgtactgaaataaatgcagccataagtttccgtgtccaactttgatagtctgttttatttgaaatttttttataattaatatttttattgttataagatgataaaacatgaatagtactttactcgtgacttatgtttttaatttttttaaatttttttaaataagacaaatggttaaagttggacgcggaaaaccatggtattttgggacggagggagtactacagattagaacatactatgaacccaacagcaaatggcatgtccactctggtgggtaccaagtgctaatgattgcccgcggcgaatgccatgcgactagcatatggtctgccgtttcacgggcccaatttgccatcactctgttttgcgcaatatgtgcaaaagctacgggtactggagccgctcaaagataagagcaagtttaatagtacagccaactgctagctccaatttatttatagccaatctaatagctaactgatctcacctgtcatatatcttgaagttcgtactacagctgagtacaaatctgtagcccactgctcttctctctccttatttatcttcttaaaatatgtttgcagctggcttatagcctgctattgtacctgctctaagggaaaggaaaccaccacggagcgcgcggttctatgcgtgcccgcgcgccgtttggccccgtatatccggccatcgctacggcgcgcggtggcatgttgagttgttgacatcgcacctgcccattcattattcctcctggacagcgagatgcacaagcagccgccgatgcagacaaggatgggccgagtccaccgtaagggcgccgacggatttggatctttgtgcatgttacgttctacagtagtaacgtactgtatataccagatgcgatgcggctatctacaggcgttgccgtatttgcacgacgctgagaaaaatcccgtgtcgagatcgacagatcgatcgaccggaacaagtgtgggttccgagcgctggaatggcagctaacgtgcgcgtgtcgtgacatgcgtgcaggactacggggtgtcggtggcgtactaccggagcacctacctggtggacatcgtcgacgagtccatcggccgcgtgctgaagctcgactccatctccggcgacgcgtggctcggcgccgacatgctcatcttcaacacctggcactggtggacccacaccggcagagaccagccgtaagaccacaaactatacgtgtcacattatcatggcctgatctgatccgtcacgtttattctgattcttttctgtatccagatgggactttgtgcaagatggaggccaggtgatgaaggacatggaccggctctcggccttctccaaggggatgtctacatgggccagatgggtcgattcgaacgtggacacatccaagaccagggtctacttccagggcatctctccaacccactacaagtaagtactagtagcctttaaaaggccaaagcccatatgaacccacccgttttaggcccagtttgcctcacgacgctgacaccgtgacacgtccggaaactgcagcggagcggactggggggaggggtcgaggagctgcgcgcagcagacgcagccggtggcggggtcggcgtacccggcggggccggtgccggcgcagagcgcggtgaggagcgcgatcgccggcatgtcgaagccggtgttcctgctcgacatcacgctgctgtcgcagctgaggagggacgggcacccgtcggggtacagcggcggccacccgggcaacgactgcagccactggtgcctcgccggcgtgccggacgcatggaaccagatcctgtacgcctcgctccttgcatagagggaaagaattggaaggggatatatctctcaatccgattggccgttctctcataatttgttggttgattgtatggagagtatttcaattggtggttccataattggttaactgatatatatggatagtccatcagaggatactacattttccttcttgttggagaagttggggataatgccagggtagacagcgaggatcaactggatacaactccttcaaaagacaacagatggttgttcggatgtggatggaaaattggaaacaactagtagtgtagtactatttctaatccaatacgcttaataaagatataccaagcaggcaagcacaacgttgatctcaaccgttggcagtaatcctttacatatggtagtaccagaatttccagacaacagatttatctaccaccacacacatacatttcgctgcaaaattatgtaaagctaatcacaacccagccaagctgacgagatactggttaggaatagggccctagagagagaacatggaggggacaaaaatgaaagacggctacagtgacaacgagaacatagattgttcactggtgtgataaatctagtgagaacatttctcaacagaaacaagcaagaaagcaaacgaactatggtaacgacgaaatgatatgatacatcgggatagtaaaatggtgctcaggccctggcaacgagtttttgctgcctccttagatgacggttctgctcttgtcgttgtatccggcacatagatgccttctccttgagctcttggaatgcccgcatggtgtccacgtcgaacccgcctgcaaactgcagcaaacgaggagtatggatgtgattcgtttcaaagttgcaccttggaagaaaatgtaagcatgaattcttttcagaaattattcatgcgcatcttaacatcttagcgagtaaatatatacctggtgtaccctgaaggcgaatcgcactccttgaagcattagttcttcttcgtcaggaccaccctttatggcctcaagttcagaagagacccgcttcaagtacttcattgctaacttcaccgactggagtttgatctgtacaccaaaggttacattcatgagtaatcatcaaacgtacacgtttattcatgcattttatcgataaaagaaatcacagatatgcccaaattacttgcccatgaatcaaatggacatcattcagagaaagagaggactgctttcatttgttagcctcaaaagttaggatatgaagcggccaaacgacaggacagaccaatcaactcagtgattgcagattgatgagggcatgtgtttatgtttctaattttcctaccaatttgtaaactgtaaatgttttttcgcgaatgcaataaactgtaaatgtaaagacttcatgtgcaatttacaaactgataggcc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0652100, RefSeq:Os01g0652100