Os01g0652600

From RiceWiki
Revision as of 04:51, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0652600| Description = Similar to Ketol-acid reductoisomerase, chloroplast precursor (EC 1.1.1.86) (Acetohydroxy-acid reductoisomerase) (Alph...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0652600

Description

Similar to Ketol-acid reductoisomerase, chloroplast precursor (EC 1.1.1.86) (Acetohydroxy-acid reductoisomerase) (Alpha-keto-beta-hydroxylacil reductoisomerase)

Version

NM_001050273.1 GI:115438916 GeneID:4325375

Length

3937 bp

Definition

Oryza sativa Japonica Group Os01g0652600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:28148010..28151946

Sequence Coding Region

28148059..28148121,28148221..28148328,28148430..28148522,28149114..28149179,28149460..28149600
,28150053..28150280,28150396..28150513,28150581..28150720,28150847..28151014
,28151108..28151263,28151361..28151726

Expression

GEO Profiles:Os01g0652600

Genome Context

<gbrowseImage1> name=NC_008394:28148010..28151946 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:28148010..28151946 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggccacctccacttcctccaccgcgctcgcccaccccaaaaccctaaaccccgccgccgccaaggtctcgtcgccgcaggtgatcggggccaccatgccgtcgctggacttcgagacatccgtcttcaagaaggagaaggtgtctctagctggccatgacgagtatattgtgaggggcgggaggaatctgttcccgctgctgccggaggcgttcaaggggatcaagcagatcggcgtaatcggatggggttctcagggtcctgcacaagctcagaacctgagggactcacttgctgaggcaaaatcagacatcgttgttaagattggtctccggaaaggttctaaatcttttgaagaagcacgcgcagctggatttactgaagagagtgggacacttggagatatatgggagactatctcaagtagcgatcttttgttgttgttgatatcagatgctgctcaggcggataactatgaggaaattttctcacacatgaaacccaacagtattcttggattgtcacatggatttctccttggacatttgcaatctgttggccttgatttccctaaaaacatcagtgttgttgctgtgtgtcccaagggaatgggcccatcagttagaaggctttatgttcagggaaaagaagtaaacggtgctggtatcaactccagctttgctgtacaccaggatgttgatggaagagcaacagatgtcgctcttggatggtcagttgctctaggttctcctttcacatttgctactactctagagcaggagtaccgaagcgatatttttggcgagcgaggtattttgcttggggctgtacatggtattgtggaggctcttttcaggagatacacagagcatgggttggatgaggactcagcatacaagaacactgttgagtgcatcactggaatcatctctaaaactatttcgaaaaaggggatgcttgaagtgtacaattcattgacagaagaaggaaagaagcaatttatcgaggcttacagtgcagcatattatccatgcatggatatactatatgaatgctatgaagatgtttcttctggaagtgaaattagaagtgttgttttggctggaaggagattttatgaaaaggaaggacttcctgctttcccgatgggcaacattgatcaaacacgtatgtggaaggtgggtgaaagggtgcggtcaacacggccagcaggtgatcttggcccattacatcctttcactgctggagtgtatgttgcacttatgatggcacagattgaagtccttagaaagaagggccactcttactcggagatcatcaacgagagtttgatcgagtctgtggattccctgaacccattcatgcacgctcgtggggtggccttcatggttgataactgctccacaacagcccggttgggatcaaggaaatgggcgccacgcttcgactacatcttgacccaacaagcttttgtgactgttgacaagaatgctccagttaatcaagacctcatcagcaatttcttctccgatcccgtccatagtgccattgaagtctgtgctcagttgaggcccaccgttgacatttcagtgcctgctgatgcagactttgtgcgtccagagctgcgacaatcttcgtga</cdnaseq>

Protein Sequence

<aaseq>MAAATSTSSTALAHPKTLNPAAAKVSSPQVIGATMPSLDFETSV FKKEKVSLAGHDEYIVRGGRNLFPLLPEAFKGIKQIGVIGWGSQGPAQAQNLRDSLAE AKSDIVVKIGLRKGSKSFEEARAAGFTEESGTLGDIWETISSSDLLLLLISDAAQADN YEEIFSHMKPNSILGLSHGFLLGHLQSVGLDFPKNISVVAVCPKGMGPSVRRLYVQGK EVNGAGINSSFAVHQDVDGRATDVALGWSVALGSPFTFATTLEQEYRSDIFGERGILL GAVHGIVEALFRRYTEHGLDEDSAYKNTVECITGIISKTISKKGMLEVYNSLTEEGKK QFIEAYSAAYYPCMDILYECYEDVSSGSEIRSVVLAGRRFYEKEGLPAFPMGNIDQTR MWKVGERVRSTRPAGDLGPLHPFTAGVYVALMMAQIEVLRKKGHSYSEIINESLIESV DSLNPFMHARGVAFMVDNCSTTARLGSRKWAPRFDYILTQQAFVTVDKNAPVNQDLIS NFFSDPVHSAIEVCAQLRPTVDISVPADADFVRPELRQSS</aaseq>

Gene Sequence

<dnaseqindica>50..112#212..319#421..513#1105..1170#1451..1591#2044..2271#2387..2504#2572..2711#2838..3005#3099..3254#3352..3717#ctctttccactcccgcagtcacaccctaagcccctcctcgcatcccaaaatggcggcggccacctccacttcctccaccgcgctcgcccaccccaaaaccctaaaccccgcctccaaatccgcggccgccggctcggtctccttccccgccgcccagcccccatgccccctcgccgcctccgccggcggccgccgccgccgcggcgccgtggccgccaaggtctcgtcgccgcaggtgatcggggccaccatgccgtcgctggacttcgagacatccgtcttcaagaaggagaaggtgtctctagctggccatgacgaggtccgatttgtgcccccctgtctcctccttccgtgaccctcttggtggttaatctgtgaagggttgctgttttgtgatgtttgtgggtggtcttgctgcagtatattgtgaggggcgggaggaatctgttcccgctgctgccggaggcgttcaaggggatcaagcagatcggcgtaatcggatggggttctcaggttaagaagatgcgaactttctttttccctcaaatggttgctttttgccacctttgttgatctggtgaatatacccatcgtccttatatttgtggctcgaatttgagtgctttaagtaccattgacaagcaaatggatatgcagcactgacttggggatatcactttatttgtgacagcacagttttttttatcagataatagagggcaatcaacgttattattgactgagcattctctggtcacttagttcttttttaccatttctgtcaggatggtatttcaagtttagtgtgactatatatgggatagagcttgcctttagttatgctaagtagaagtcagtctgtaattatgaatgttctttggtgccttatcagtgaagtgttcaagattgaaattagttaacagcatgcgtagagctcttactgaataaaagcagttgcttgattagcatttagctcgtttaagtgctaataatttaccatcagtactttttccccatatatcatgacatgttctggacagaaaattacatatattaacaaagctaaatttgtgctataacagaggctatgctttttatttgcagggtcctgcacaagctcagaacctgagggactcacttgctgaggcaaaatcagacatcgttgttaaggttagttttttctttaatcctctggtggcccgacatgtcttagacgaggccgtttttcatgtatagattcattaagtgctgttaactttgcatgcctaagctatcaagtattttgttgtgtcctgtaactcaaacgcaccaattttctgtaagatggctatctgccttttcctcttttcattttagaatgtgtgcatggtcatctttttcagcacttcagcagttgtactgcactacagctacttactggtgcatctgacttgaatatcttttgtttcagattggtctccggaaaggttctaaatcttttgaagaagcacgcgcagctggatttactgaagagagtgggacacttggagatatatgggagactatctcaagtagcgatcttttgttgttgttgatatcagatgctgctcaggtttatttctgtcctacctggtttaatttctaagagattttagagtgacactgtacaattctgaaactatattgatcataatttgccatactaatatatattgatatttcatgttgacttccacatactgaatcttagttggaccacatgttgctcagatatatttcacacggcacaatacatgttttgtagaattaaaaagtaacataaatccatatattatgatatttattatgtcagctcgagtttttttttatttacagaatgccatctagttgtttatagatcataattttgaatgtcttaaaaacagttttgttaagcttgtgtgtctgattgtctgttatgctgtggatttgttatacagtgaactttaactgatgtctcatttctatgtggcctgcacaattttgctacggatattgacatgcattgtataatactttgtacaggcggataactatgaggaaattttctcacacatgaaacccaacagtattcttggattgtcacatggatttctccttggacatttgcaatctgttggccttgatttccctaaaaacatcagtgttgttgctgtgtgtcccaagggaatgggcccatcagttagaaggctttatgttcagggaaaagaagtaaacggtgctggtatcaactccagctttgctgtacaccaggtatttatgttgctactcaccttgtttgatttcatttgagaataaatgctcttttcctttggtccttccatcaagtatatagttgctaatcacttttgtatgttccattatacaggatgttgatggaagagcaacagatgtcgctcttggatggtcagttgctctaggttctcctttcacatttgctactactctagagcaggagtaccgaagcgatatttttggcgagcgaggtgatttactttccggtgtacactaacaaatttctgcctaagcttgtggctaataatttatttccaggtattttgcttggggctgtacatggtattgtggaggctcttttcaggagatacacagagcatgggttggatgaggactcagcatacaagaacactgttgagtgcatcactggaatcatctctaaaactatttcgaaaaaggtacatgcatatatttttccgttatgcatttaaggctttttacttatttcacaacaaggtccacgattctgtttttaaatctcttttgtgcctttttacttgatgtataactaccaattgtatcaggggatgcttgaagtgtacaattcattgacagaagaaggaaagaagcaatttatcgaggcttacagtgcagcatattatccatgcatggatatactatatgaatgctatgaagatgtttcttctggaagtgaaattagaagtgttgttttggctggaaggagattttatgtacgctctcttccatatccataaaacatatcataatcttatttccttgggttttgaaacaaaataaaatatttgacgcctgtattcttataggaaaaggaaggacttcctgctttcccgatgggcaacattgatcaaacacgtatgtggaaggtgggtgaaagggtgcggtcaacacggccagcaggtgatcttggcccattacatcctttcactgctggagtgtatgttgcacttatgatggcacaggttggatgattgtattctttttttcaaattagaacccatttatatacattggtttataaaatgtttattcatatgttctgttttgcactgattttagattgaagtccttagaaagaagggccactcttactcggagatcatcaacgagagtttgatcgagtctgtggattccctgaacccattcatgcacgctcgtggggtggccttcatggttgataactgctccacaacagcccggttgggatcaaggaaatgggcgccacgcttcgactacatcttgacccaacaagcttttgtgactgttgacaagaatgctccagttaatcaagacctcatcagcaatttcttctccgatcccgtccatagtgccattgaagtctgtgctcagttgaggcccaccgttgacatttcagtgcctgctgatgcagactttgtgcgtccagagctgcgacaatcttcgtgaagtttttgccaactccaggggcacctcataaactatgtcagtatctgacggtttcaactctcaaagctatgtatcactatttgagaacctaaatgtaaacttttggagtgtaggattgtcgtttggttgtcactggactagtgctggtgtttggcatgaataaaaatagtggtttaataaatgccgttcccttagagcagcagaggtggctgctccctct</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0652600, RefSeq:Os01g0652600