Os01g0655400

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Revision as of 04:51, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0655400| Description = Conserved hypothetical protein| Version = NM_001050286.1 GI:115438942 GeneID:4324178| Length = 6204 bp| Definition ...")
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Gene Name

Os01g0655400

Description

Conserved hypothetical protein

Version

NM_001050286.1 GI:115438942 GeneID:4324178

Length

6204 bp

Definition

Oryza sativa Japonica Group Os01g0655400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:28358119..28364322

Sequence Coding Region

28358158..28359195,28359373..28359465,28359552..28360941,28361872..28362511,28363150..28364041

Expression

GEO Profiles:Os01g0655400

Genome Context

<gbrowseImage1> name=NC_008394:28358119..28364322 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:28358119..28364322 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcctcggagctcgcgccacaggtcgtcgtcccaccggtcgcacaggcgcggcgggtcggtggagcggtcggagtccgagggcgatgaggcgggcggcggcgccggggcgcgggaggaggccgcggcggctagggtttcgcgagatcccgagccggagaggcgccgctcgtcgtcggggaaggaggtggtgagctcggggaacgggtacgcggagcacgggaggaagaggaaggacagggtggaggagatggtcgtcgatgtggtcagtgaccgctggaacagcggcgtgtgcgaggatcacttggtcgagaagaggtccaagggcgaggtgtttgggcctgtcgatgtggacaagctacctgagaagtccaggggatcaggggatgaatcaaagaggtcgagtaggcgtatggtgtctatggatgatagggctgaggaggttgtgtccaaaagtgattctgggaagcgccgctccgacaaggatttggggaggagggagagtagtgggcagtatagggatgacagagatagggagagggagagagatagggagaaggagagagatagggaaaaggagaaagaatgggagagacagaaagagcgagaaagggaaagaggcagggacagagaaagggatagagatcgggagaaggatagagagagagaacgggagcgggacaaagaacgggatcgagaacgtgacagggagcgggagcgagagcgggatagggaacgggagcgtgagaggcaaaaggaccgagagagggagaagaaagattatgattccaagcatgagaggtatgatgatggtggtgctaagaagaatggctccaaggcaagtaggggagaggaggatggttactcatacaagagagatacagagatcaatgcatctgcaacaaaagagaagtacaataacaccgagaaggaccttgatagacatagccgaagaaaagatgtttctgaagataaagataagtggcctgctgaaaatagagatggtgatgatagaaaaacactttccagatatgatcatagtaaagttaggagctctaaggagcaaaggtttgatgatgataaatataaagaaaagtacaaggatgattatgaaagggataaaagacagcaagatgacaagtgtctggatgagcggttgacccgtgatcatgaaagtgatagagctgattataagagttctaaagacggacacagaacttccgagagccactacagaaaggatgtaattcaagaaccagatcattatgatgattatggtagtaggtacaaggaaagtagagggagaaaaaggcctcctgaggaaaatgatgaccaatatgatttgaagcctccaagtgcacgggagcaacgtggcagtgctgataagtcttctgggagtgggcgacttgatgccctggttgagagaatgaggtctgaccatagacatccagaaaatgtcgattctagtccgaataaagtccatccaagaagttcacctggcccaaatacttatcatgacaaagatcaaaattggcacggatctaaattgacagatcatgctaagagagaaataccatatgacgagagaaatattcgaccaaggacttcttctgggagagaacggacacctgcttctagactgcgtgatagggatgcagacaaccggccttcagaaaggctgaaacaaaaggatgatctccagtcacgtgacatgcaattggaaatttcgtcatcattacaatatgatcgcacacctaggaaggatgcacatccttctccaaagcacttatctgaaagatctccaactgaacaaaggttttcaggaaggctcagtggtggacgtagtactgataataaagcagaaagaagtggcctgaccaaatatagagatagagatggtgattctgtagaacggtcagttcatcaagaccgaacaccagctaaagctccatacagagaaccaacaccttctagttcgtccagaggtggccatttttcaggcacttcaccaaatcatccactgccaccacctccaaggcacagaagtgatgattcttcatttctgggtttgcatgatgatgatcgtaggcctcaaagtggagacaggaggttccatcagaagaggaatgatatgagttctggacgtgggcatggacatgcctggaacaatccaccgagctggccttctccagttgcaaatggttttgttcccatgcaacatggtgtgcctggatttcacccccctgttcatcagttttctgccccaccaatgtttaatctcagaccccaaatgaagttgaaccaacctggagtttcatatcctatgcatgagtcagttgacaggttctcgacccacatgcgcccatttgggtggcccaatcctctagatgaatcatgcccccctcacctgcaagtttggaatggaggcagtggcgtattcgccagcgaaccctatatgtatggcaggcaagagtgggatcagaacaggcaacatagtgtcagcagagggtgggagacaactggcgatgcattgaaaggacaaaatgaattgcatgagcgtgaaccttctgttactaaaaaggagcctgattgttcagcaacacctgttcccgagacttctactgggcaatacaatcttaattctcgtattgaacagaaggagatggatcagacattagagaaaaatggaacgaaggatgatctgaaaagctcttttagaaatactggaggttctggtggggcaccactcatgacttctatgccatcaaacagtggtactgcaattttttctaaaagttatctgtccaaaattagtgtgtcacgggatcttgttgagtcggagctgtacaaaaggtgcatatccttgctggcagactttggtattgcaaatactcctgaggttgttgggactggacttgtgcagaacaatggaagctttgggaagataaatagaaaacttggaacccccaatctgttgggttcacataaccttaaaaacaagagtgatatctttcagagagctttggcccttcacaagaatcagacagcaaagattgtttctcctacccactcgattctcgagactgacaggaagacatacttaccagaagataatcatgatgacacagaaatgactgaccatactgtgtcgaaggaattgcttgtcgataactctgaaccacatcatggtgctgataccatggagaaagagttaccattgagacaggagctagctggtggcattggcgtgacatctccagcaagtatagaacctggtaatgtgggggcacctccagtaattattgaacctgatgtaggcatggaggatgtggcacctccaaaaatcgtagaacctgatgaaggcatggaggatgcggcacctccaaaaattgtagaacctgatgaaggcatggaggatgcggcacctccaaaaattgtagaacccgatcaaggcatggaggaggtggcatctccaacaatcaaagaacctgatgaagacattgaggtgatgcctttaggaactgcagaacctggcaaaggcatggaggaggtggcacctggaggaatttcagaacctgagaaaggtatggagaatttggtgcctccaggaattgcagaacctgtcaaagatggcatggatgatgtggctgctccatctgcagggcctgctgccggccttggggatggtgtgccagaagttactgttgaactagctgatagcgcgcaggagaaacctccagccatgggagaattgggtgatggcatggaggttatgccaccaccagtcacagaaactagcctaggcaaggaggattctcctgctgttcctagttctcctgaagttcaagagatcgtctccggcatgcatgcaggcattgagaaaggtatggaaggagagactgataatttaattgatgataaccctggggatggtgaggtgaacgcatctagccttgagctggatgttgcaagtggcgctgatgattgtgaagccttggtggagagtagggtaaatttaagtcggatacctaattccccagaaagtacacattga</cdnaseq>

Protein Sequence

<aaseq>MPRSSRHRSSSHRSHRRGGSVERSESEGDEAGGGAGAREEAAAA RVSRDPEPERRRSSSGKEVVSSGNGYAEHGRKRKDRVEEMVVDVVSDRWNSGVCEDHL VEKRSKGEVFGPVDVDKLPEKSRGSGDESKRSSRRMVSMDDRAEEVVSKSDSGKRRSD KDLGRRESSGQYRDDRDRERERDREKERDREKEKEWERQKERERERGRDRERDRDREK DRERERERDKERDRERDRERERERDRERERERQKDREREKKDYDSKHERYDDGGAKKN GSKASRGEEDGYSYKRDTEINASATKEKYNNTEKDLDRHSRRKDVSEDKDKWPAENRD GDDRKTLSRYDHSKVRSSKEQRFDDDKYKEKYKDDYERDKRQQDDKCLDERLTRDHES DRADYKSSKDGHRTSESHYRKDVIQEPDHYDDYGSRYKESRGRKRPPEENDDQYDLKP PSAREQRGSADKSSGSGRLDALVERMRSDHRHPENVDSSPNKVHPRSSPGPNTYHDKD QNWHGSKLTDHAKREIPYDERNIRPRTSSGRERTPASRLRDRDADNRPSERLKQKDDL QSRDMQLEISSSLQYDRTPRKDAHPSPKHLSERSPTEQRFSGRLSGGRSTDNKAERSG LTKYRDRDGDSVERSVHQDRTPAKAPYREPTPSSSSRGGHFSGTSPNHPLPPPPRHRS DDSSFLGLHDDDRRPQSGDRRFHQKRNDMSSGRGHGHAWNNPPSWPSPVANGFVPMQH GVPGFHPPVHQFSAPPMFNLRPQMKLNQPGVSYPMHESVDRFSTHMRPFGWPNPLDES CPPHLQVWNGGSGVFASEPYMYGRQEWDQNRQHSVSRGWETTGDALKGQNELHEREPS VTKKEPDCSATPVPETSTGQYNLNSRIEQKEMDQTLEKNGTKDDLKSSFRNTGGSGGA PLMTSMPSNSGTAIFSKSYLSKISVSRDLVESELYKRCISLLADFGIANTPEVVGTGL VQNNGSFGKINRKLGTPNLLGSHNLKNKSDIFQRALALHKNQTAKIVSPTHSILETDR KTYLPEDNHDDTEMTDHTVSKELLVDNSEPHHGADTMEKELPLRQELAGGIGVTSPAS IEPGNVGAPPVIIEPDVGMEDVAPPKIVEPDEGMEDAAPPKIVEPDEGMEDAAPPKIV EPDQGMEEVASPTIKEPDEDIEVMPLGTAEPGKGMEEVAPGGISEPEKGMENLVPPGI AEPVKDGMDDVAAPSAGPAAGLGDGVPEVTVELADSAQEKPPAMGELGDGMEVMPPPV TETSLGKEDSPAVPSSPEVQEIVSGMHAGIEKGMEGETDNLIDDNPGDGEVNASSLEL DVASGADDCEALVESRVNLSRIPNSPESTH</aaseq>

Gene Sequence

<dnaseqindica>5128..6165#4858..4950#3382..4771#1812..2451#282..1173#attcctccaccccacgaaccccgtcgtctccaatccctcgccgccgcctcctcctccaccccccacctctccgctccctcctaccaaaaccctagccgcaccgcgccgcacaggccccggccctcccctcccctcccccgccgccacggccgcctagatcccccctcggatcccgcgggcgctagggtttcccgggctgcgcctcgtccccggcctcaccccggcctcgcgtacggaagtcgtccggggctagggttccggatttgggggggagccccgccatgcctcggagctcgcgccacaggtcgtcgtcccaccggtcgcacaggcgcggcgggtcggtggagcggtcggagtccgagggcgatgaggcgggcggcggcgccggggcgcgggaggaggccgcggcggctagggtttcgcgagatcccgagccggagaggcgccgctcgtcgtcggggaaggaggtggtgagctcggggaacgggtacgcggagcacgggaggaagaggaaggacagggtggaggagatggtcgtcgatgtggtcagtgaccgctggaacagcggcgtgtgcgaggatcacttggtcgagaagaggtccaagggcgaggtgtttgggcctgtcgatgtggacaagctacctgagaagtccaggggatcaggggatgaatcaaagaggtcgagtaggcgtatggtgtctatggatgatagggctgaggaggttgtgtccaaaagtgattctgggaagcgccgctccgacaaggatttggggaggagggagagtagtgggcagtatagggatgacagagatagggagagggagagagatagggagaaggagagagatagggaaaaggagaaagaatgggagagacagaaagagcgagaaagggaaagaggcagggacagagaaagggatagagatcgggagaaggatagagagagagaacgggagcgggacaaagaacgggatcgagaacgtgacagggagcgggagcgagagcgggatagggaacgggagcgtgagaggcaaaaggaccgagagagggagaagaaagattatgattccaagcatgagaggtatgatgatggtggtgctaagaagaatggctccaaggcaagtaggggagaggaggatggttactcatacaagagagatacagagatcaatggtaaggtcctgggctcatatgttctcttaaatgttgataaggttcccgtgacctgtgcaatgatatgttctatagattgcagaacattttactcagcctcgatacatttagacttgttttgctggaatcacatcaccattttaatttcacaatgagttggcccaacaagcattgcatgctgtggaactccacaagtttgttatattcctatgtgcaggttttttcataaatttctttttatactgttgatcttattgtacttcgatacacttgacttgttgggttaagcaaattgctgaaaatgcatccgtttcaaccatagagatataaatttataatagccctattatgagtagatgtacatattgattgctgaactggctaaattttcacaaccaattcgttgaattcaaccctgattctcatttgatataagtcagtagctgagtacataattttgaggaaacatatttcttctaatctcgtctagtacttctaacagtagtaatcaatgtgtatgtacagaatatattttgtgaatagtgaaatttgtgctcaaagtgccaattgttgttagtatcctgttgttctctttgtttccttttattatcttctgaaattatatcctttggaaacagcatctgcaacaaaagagaagtacaataacaccgagaaggaccttgatagacatagccgaagaaaagatgtttctgaagataaagataagtggcctgctgaaaatagagatggtgatgatagaaaaacactttccagatatgatcatagtaaagttaggagctctaaggagcaaaggtttgatgatgataaatataaagaaaagtacaaggatgattatgaaagggataaaagacagcaagatgacaagtgtctggatgagcggttgacccgtgatcatgaaagtgatagagctgattataagagttctaaagacggacacagaacttccgagagccactacagaaaggatgtaattcaagaaccagatcattatgatgattatggtagtaggtacaaggaaagtagagggagaaaaaggcctcctgaggaaaatgatgaccaatatgatttgaagcctccaagtgcacgggagcaacgtggcagtgctgataagtcttctgggagtgggcgacttgatgccctggttgagagaatgaggtctgaccatagacatccagaaaatgtcgattctagtccgaataaagtccatccaagaagttcacctggcccaaatacttatcatgacaaagatcaaaattggtaatgcttcctcattatgttttgcatcaaaatattttatcttacttaataggcttcagcattgcagttgtatcttaacttaggttacatatgtgaaaaaaaatctaaatttgttttaactcggctttgtcacatatcttatcttagtgttgtgcatattgtttttctctttggcactagaactttattgagtaaggaggtttgctttttccatgtagattttacagtcagcaatgataatattttttttccattcttactaattgcatatgtaggtattgcaaatagtgtggttcatacaaaataatgaccaataacatcttcctgtaaataaatagagagtggttctgtcatttgttggtcagctggtatctttccaagtgtgaactaacacatttctgtttctgatgacgccacatgtgtatagttttcttgtcaagttctctgactaaaggtgcttattatagcttttgagggtgagaaatggatataatgatcttcaattcaaaaaggatcttatatggggtgaagttgttgaatgggtttttaggggatctcctgtgaggtatagagttaatctgttttcagttaaatttgttggccctttattgaggtagcatttatattagtccagagaaaaaaatgttgtattggtttactgccactctgttagtgggtgtgagagcttgatatttctcatgtatatgtggtctggttattcagctcattttacctctgcagatcaacttgactagggaaaactatcaggaatcctttaatttcatgatccatgttctatatgtcggttttataatgagaactgtatttttttcactttaagtaattttttgtttagatcatattatctgcattttttacttgatgctctacatcttttaataatcgaacggttgatcacttggtgttcaggcacggatctaaattgacagatcatgctaagagagaaataccatatgacgagagaaatattcgaccaaggacttcttctgggagagaacggacacctgcttctagactgcgtgatagggatgcagacaaccggccttcagaaaggctgaaacaaaaggatgatctccagtcacgtgacatgcaattggaaatttcgtcatcattacaatatgatcgcacacctaggaaggatgcacatccttctccaaagcacttatctgaaagatctccaactgaacaaaggttttcaggaaggctcagtggtggacgtagtactgataataaagcagaaagaagtggcctgaccaaatatagagatagagatggtgattctgtagaacggtcagttcatcaagaccgaacaccagctaaagctccatacagagaaccaacaccttctagttcgtccagaggtggccatttttcaggcacttcaccaaatcatccactgccaccacctccaaggcacagaagtgatgattcttcatttctgggtttgcatgatgatgatcgtaggcctcaaagtggagacaggaggttccatcagaagaggaatgatatgagttctggacgtgggcatggacatgcctggaacaatccaccgagctggccttctccagttgcaaatggttttgttcccatgcaacatggtgtgcctggatttcacccccctgttcatcagttttctgccccaccaatgtttaatctcagaccccaaatgaagttgaaccaacctggagtttcatatcctatgcatgagtcagttgacaggttctcgacccacatgcgcccatttgggtggcccaatcctctagatgaatcatgcccccctcacctgcaagtttggaatggaggcagtggcgtattcgccagcgaaccctatatgtatggcaggcaagagtgggatcagaacaggcaacatagtgtcagcagagggtgggagacaactggcgatgcattgaaaggacaaaatgaattgcatgagcgtgaaccttctgttactaaaaaggagcctgattgttcagcaacacctgttcccgagacttctactgggcaatacaatcttaattctcgtattgaacagaaggagatggatcagacattagagaaaaatggaacgaaggatgatctgaaaagctcttttagaaatactggaggttctggtggggcaccactcatgacttctatgccatcaaacagtggtactgcaattttttctaaaagttatctgtccaaaattagtgtgtcacgggatcttgttgagtcggagctgtacaaaaggtgcatatccttgctggcagactttggtattgcaaatactcctgaggttgttgggactggacttgtgcaggtattgacctggtcatttgatgttagtatctgttcagctgatctggttttcctgttttctgacgatatttattgctcattccgcagaacaatggaagctttgggaagataaatagaaaacttggaacccccaatctgttgggttcacataaccttaaaaacaagagtgatatctttcaggcaagtgtcaacttattcaatctttttttttcaagtattcatcgtgcaatacccaagcaggaaattcattgctttgagtttctcctattcttacaacaatcctgtgatcgtagcaattattaacctttacatgagaatgcttgttaaatttctgttcttttttttctttcacaacagagagctttggcccttcacaagaatcagacagcaaagattgtttctcctacccactcgattctcgagactgacaggaagacatacttaccagaagataatcatgatgacacagaaatgactgaccatactgtgtcgaaggaattgcttgtcgataactctgaaccacatcatggtgctgataccatggagaaagagttaccattgagacaggagctagctggtggcattggcgtgacatctccagcaagtatagaacctggtaatgtgggggcacctccagtaattattgaacctgatgtaggcatggaggatgtggcacctccaaaaatcgtagaacctgatgaaggcatggaggatgcggcacctccaaaaattgtagaacctgatgaaggcatggaggatgcggcacctccaaaaattgtagaacccgatcaaggcatggaggaggtggcatctccaacaatcaaagaacctgatgaagacattgaggtgatgcctttaggaactgcagaacctggcaaaggcatggaggaggtggcacctggaggaatttcagaacctgagaaaggtatggagaatttggtgcctccaggaattgcagaacctgtcaaagatggcatggatgatgtggctgctccatctgcagggcctgctgccggccttggggatggtgtgccagaagttactgttgaactagctgatagcgcgcaggagaaacctccagccatgggagaattgggtgatggcatggaggttatgccaccaccagtcacagaaactagcctaggcaaggaggattctcctgctgttcctagttctcctgaagttcaagagatcgtctccggcatgcatgcaggcattgagaaaggtatggaaggagagactgataatttaattgatgataaccctggggatggtgaggtgaacgcatctagccttgagctggatgttgcaagtggcgctgatgattgtgaagccttggtggagagtagggtaaatttaagtcggatacctaattccccagaaagtacacattgaaactcctttcatttcatttttaattcctttctcattttc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0655400, RefSeq:Os01g0655400