Os01g0656600

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Revision as of 04:51, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0656600| Description = contains InterPro domain(s): IPR002017, IPR010989| Version = NM_001050291.1 GI:115438952 GeneID:4324184| Length = 23...")
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Gene Name

Os01g0656600

Description

contains InterPro domain(s): IPR002017, IPR010989

Version

NM_001050291.1 GI:115438952 GeneID:4324184

Length

2320 bp

Definition

Oryza sativa Japonica Group Os01g0656600, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:28455100..28457419

Sequence Coding Region

28455319..28457403

Expression

GEO Profiles:Os01g0656600

Genome Context

<gbrowseImage1> name=NC_008394:28455100..28457419 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:28455100..28457419 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtataatgagcttacagtatgccaagaggagaaaaatgcagcactcctacaggtacaacagctggaggctaatctgaagaatcttgaaagtgagttggaacagaaacagagccaagtttcagctctagagcaagcaaatgaagaattacgagagaaaatttctagtttggagaggcaactagaagaggctagaagtaagctgcaggacgagatcattaagctacaaggagaaaaggaacgagcacttgataatttgcagcagtcaaacacttcaattaagacatttgaagaggaattagagaaacagagagaacataattctattcttcagcttgctaatgacgatctgcacaagagcatcgctaacctggagaaggaacttgaagacaccaaggttagttctcatgctgaaattttagcactacaagaacagaagaacaaagcactgtcagacttgcagcagtctgaaatctctatcgagaacttcagaatggagttagagcaaggaagagagaaaatttcaatcttggatctatctaatgaagaaatgaaggataacaattatagactgaaccagcaattggaggagataaggactagtctgcatgctgagattgcagctctacatgaagagaaggatgcagctcaattagagttacagcaatctctggcttctgcgaggaacttggagacggtgctagaaaagcaaacagagaacctttcaactctacagcacgctaatgataacttaaagaagaacaattgtaccttgactgagcaattcgaagtaatcaagattgagctgcaggaggaggttaagatggcacatgaagagaaggatgccacactaacacaactagagaagtcagaggattctatcaagaatcttgaaagtgagttggcacagctgaaggaggaactatcagttcagatggaaagcaattccagcttgaacaagcaattggaggaggcaatattgaaagtgtcaaacttaactgaggagctcgagacagttcaagctgagactgccagtaaaattaatgacatggaaactaacacaaaagatttggtaaatacaattgttctattatcttctcagaagaacaaagtggaggagcatatgaaaattattaccgaagcatgcatggagaaaatgtcatttatgaaagatttcgaagatcaagtaaagcaaaaaattacagatcgtgagatagcaattgcttgcctccagcagagcctcagaggaattattggcagctgccagagactccagtatgcatatggagaggtatccacaaaggcatcacaccttgaggtacttaggaggaatcacctcgtgcagatagatacattggagaacaaacacacagaaattatggagaaacatcgtcatttaggggaggaaaatacatctgcaaacaaagagaacagaaagctacaaaatcatgtccaagaacttgaagctcagctccagctagccaggcagaagcttagagttactgaggcagaaagcaaaagcaaagaagacagctatgtgatggcagtggaaaaatcacatagagagatccagtatcttgaacagaaaatacagaaatattctggacagatcaactcactggaagaaactctcgtacaaataaaaggaaatgctgagtccggaacctccacactggttgatcaattggatcagctagaatcacatttcaataagagtttttcccacttctctgcccgttcatttgcatgcagtgaagagctcaagctcttaaggaacaggttacagcaccatcttgctgaacagaaagaattggtcaagaagaatgatgtgctaggtatgaggttgagagagaaagaaaacgttttgtcagaaatggtgagaagtgcttccgaggcgaagaagaagatggctcaccttgagaagacaattgacgagaaagaagaagagatatcagctagggtgcaagagaaaagagaagctatcaagcaactgagtaatgcaattatttaccacaagaacaatagcgatgatctgatccgctacattcgcaaccataaccgccgtcgccttccattttgtttgtaa</cdnaseq>

Protein Sequence

<aaseq>MYNELTVCQEEKNAALLQVQQLEANLKNLESELEQKQSQVSALE QANEELREKISSLERQLEEARSKLQDEIIKLQGEKERALDNLQQSNTSIKTFEEELEK QREHNSILQLANDDLHKSIANLEKELEDTKVSSHAEILALQEQKNKALSDLQQSEISI ENFRMELEQGREKISILDLSNEEMKDNNYRLNQQLEEIRTSLHAEIAALHEEKDAAQL ELQQSLASARNLETVLEKQTENLSTLQHANDNLKKNNCTLTEQFEVIKIELQEEVKMA HEEKDATLTQLEKSEDSIKNLESELAQLKEELSVQMESNSSLNKQLEEAILKVSNLTE ELETVQAETASKINDMETNTKDLVNTIVLLSSQKNKVEEHMKIITEACMEKMSFMKDF EDQVKQKITDREIAIACLQQSLRGIIGSCQRLQYAYGEVSTKASHLEVLRRNHLVQID TLENKHTEIMEKHRHLGEENTSANKENRKLQNHVQELEAQLQLARQKLRVTEAESKSK EDSYVMAVEKSHREIQYLEQKIQKYSGQINSLEETLVQIKGNAESGTSTLVDQLDQLE SHFNKSFSHFSARSFACSEELKLLRNRLQHHLAEQKELVKKNDVLGMRLREKENVLSE MVRSASEAKKKMAHLEKTIDEKEEEISARVQEKREAIKQLSNAIIYHKNNSDDLIRYI RNHNRRRLPFCL</aaseq>

Gene Sequence

<dnaseqindica>17..2101#agcagcgaagactgatatgtataatgagcttacagtatgccaagaggagaaaaatgcagcactcctacaggtacaacagctggaggctaatctgaagaatcttgaaagtgagttggaacagaaacagagccaagtttcagctctagagcaagcaaatgaagaattacgagagaaaatttctagtttggagaggcaactagaagaggctagaagtaagctgcaggacgagatcattaagctacaaggagaaaaggaacgagcacttgataatttgcagcagtcaaacacttcaattaagacatttgaagaggaattagagaaacagagagaacataattctattcttcagcttgctaatgacgatctgcacaagagcatcgctaacctggagaaggaacttgaagacaccaaggttagttctcatgctgaaattttagcactacaagaacagaagaacaaagcactgtcagacttgcagcagtctgaaatctctatcgagaacttcagaatggagttagagcaaggaagagagaaaatttcaatcttggatctatctaatgaagaaatgaaggataacaattatagactgaaccagcaattggaggagataaggactagtctgcatgctgagattgcagctctacatgaagagaaggatgcagctcaattagagttacagcaatctctggcttctgcgaggaacttggagacggtgctagaaaagcaaacagagaacctttcaactctacagcacgctaatgataacttaaagaagaacaattgtaccttgactgagcaattcgaagtaatcaagattgagctgcaggaggaggttaagatggcacatgaagagaaggatgccacactaacacaactagagaagtcagaggattctatcaagaatcttgaaagtgagttggcacagctgaaggaggaactatcagttcagatggaaagcaattccagcttgaacaagcaattggaggaggcaatattgaaagtgtcaaacttaactgaggagctcgagacagttcaagctgagactgccagtaaaattaatgacatggaaactaacacaaaagatttggtaaatacaattgttctattatcttctcagaagaacaaagtggaggagcatatgaaaattattaccgaagcatgcatggagaaaatgtcatttatgaaagatttcgaagatcaagtaaagcaaaaaattacagatcgtgagatagcaattgcttgcctccagcagagcctcagaggaattattggcagctgccagagactccagtatgcatatggagaggtatccacaaaggcatcacaccttgaggtacttaggaggaatcacctcgtgcagatagatacattggagaacaaacacacagaaattatggagaaacatcgtcatttaggggaggaaaatacatctgcaaacaaagagaacagaaagctacaaaatcatgtccaagaacttgaagctcagctccagctagccaggcagaagcttagagttactgaggcagaaagcaaaagcaaagaagacagctatgtgatggcagtggaaaaatcacatagagagatccagtatcttgaacagaaaatacagaaatattctggacagatcaactcactggaagaaactctcgtacaaataaaaggaaatgctgagtccggaacctccacactggttgatcaattggatcagctagaatcacatttcaataagagtttttcccacttctctgcccgttcatttgcatgcagtgaagagctcaagctcttaaggaacaggttacagcaccatcttgctgaacagaaagaattggtcaagaagaatgatgtgctaggtatgaggttgagagagaaagaaaacgttttgtcagaaatggtgagaagtgcttccgaggcgaagaagaagatggctcaccttgagaagacaattgacgagaaagaagaagagatatcagctagggtgcaagagaaaagagaagctatcaagcaactgagtaatgcaattatttaccacaagaacaatagcgatgatctgatccgctacattcgcaaccataaccgccgtcgccttccattttgtttgtaattttgattaaaaatagtaatgccagtagatgtaaagcttgcgtatattctagctttgaactgtggcagaaagggaactgttgccagatattttttttctcatcatctcatgtatcatataaagttctgaaatactcatcgaagtagtcagacaggttgccctttattctttgggcaactggaagtgctgaagatatttttgttgttctttgctcttgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0656600, RefSeq:Os01g0656600

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