Os01g0658900

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Revision as of 04:52, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0658900| Description = OSBZ8| Version = NM_001050301.1 GI:115438972 GeneID:4327165| Length = 5376 bp| Definition = Oryza sativa Japonica G...")
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Gene Name

Os01g0658900

Description

OSBZ8

Version

NM_001050301.1 GI:115438972 GeneID:4327165

Length

5376 bp

Definition

Oryza sativa Japonica Group Os01g0658900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:28555939..28561314

Sequence Coding Region

28556280..28556495,28556597..28556722,28556846..28556923,28557445..28557602,28557818..28557866
,28557957..28558002,28558115..28558242,28558742..28558825,28558905..28558997
,28559093..28559137,28559380..28559439

Expression

GEO Profiles:Os01g0658900

Genome Context

<gbrowseImage1> name=NC_008394:28555939..28561314 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:28555939..28561314 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggaaatgacgaagctgtagttactcagaagatggggaaagcaccatcgccccctaaggatcatccagcccttagtccataccttgattggtcaaatatgcaggcatattacggcccagggatcttgccaccaacattttttagccctggaatagccgctggtcatacccctcctccatttatcttgggtcctcagcctctggtgccatccgcttttgggaagccatatgccgcaatttatcctcctggtggagctttttcacatccgttcatgcccctaatggtgagcccattgagcatggagccagcaaagtctgtcaacagcaaggatagctgttcaaataagaaaatgaaggaaattgatggtgcggctgtgtcaactggcagtggcaacagtgaaaaaacaagtggagattgcagcttagaaggatccagtgatggaaacaaccagaaggcaagtggaactcccaagaaaaggagcatagatgataggcctaaatcaggcgtggaaactggtggagctttaacacctaatgatagacctagcgaacaagcagctttgccaaatctatgcattccggttacagcaatcaaaccagacgtgagcactgctagtgacttcagagttattgccaccccagtaactgaagtgccaactaaggatgataaggaatcgaagcgcgagagaaggaagcaatcaaacagggagtctgctcggaggtcaaggttgaggaagcaggccgagactgaggaactggctagaaaagttgagctattgactgcggagaacacatcccttagacgtgaaataagcaggctaacggaaagctccaagaaacttagattagagaattctgctctaatggagaaactaacggaaaccgggcctgatgaagcacaagaagtgcctccagtcaaaacaaaagcacagcaagctcgaggcgtcgaaaatttcctgtcaatgatagacaagactggcacgccgagaagcagcgggcacatggatcatgccattgccacgcccaagcttcgtcaactcctgggctctggtctggcgactgatgctgtagccgcaaggtaa</cdnaseq>

Protein Sequence

<aaseq>MGNDEAVVTQKMGKAPSPPKDHPALSPYLDWSNMQAYYGPGILP PTFFSPGIAAGHTPPPFILGPQPLVPSAFGKPYAAIYPPGGAFSHPFMPLMVSPLSME PAKSVNSKDSCSNKKMKEIDGAAVSTGSGNSEKTSGDCSLEGSSDGNNQKASGTPKKR SIDDRPKSGVETGGALTPNDRPSEQAALPNLCIPVTAIKPDVSTASDFRVIATPVTEV PTKDDKESKRERRKQSNRESARRSRLRKQAETEELARKVELLTAENTSLRREISRLTE SSKKLRLENSALMEKLTETGPDEAQEVPPVKTKAQQARGVENFLSMIDKTGTPRSSGH MDHAIATPKLRQLLGSGLATDAVAAR</aaseq>

Gene Sequence

<dnaseqindica>4820..5035#4593..4718#4392..4469#3713..3870#3449..3497#3313..3358#3073..3200#2490..2573#2318..2410#2178..2222#1876..1935#agcgcgcctcagcctcagtacccaccacctccacgctcgcgccgtcggcttcgtgctcctgcgccgccgcaccgatctgcaccgtacgcgggcgtcgatccatccaaggtacgcgcggcgcggccgatctctgcctccctctccgtgttcacgcgcaatgcccggcccctggttcgtcttctctttcgttttagcacttcgccgcgagggtgaaggtttgtagtagcggagagcaggagccaggaagcccaagccctccctcgttcgtccctgaaattttaacgcgtttcgtccggactccggaagatcctctgttcgatcttgtagcgagtatattatcatacttctactgtcgtcgtagtagcaattcacctccaaaaaaaaaaacaaaactgtcgtagtagcagtgattcaaatgcattggttcggctttcttttgcttcctgttgggtttaaaagcgaatcctatggccacacgtaggaagcgtgtacacgtttcttaagtttactactagtatatttttcgttatttcaaacagaaatgaaattatttatgggaaaaggtgagagttgagtaattggaacgccgattttcccggtttcactatttgttaggtaacaagtggactgttacgtgtaaaattattgcgctccataggacccctggtttgtgcggtttggaagactgtaaaattggtgcccgccctggctgcccttgtcatctcagtctcaggtagtcaggtgtcacttggccttgtgcatacgttggataccggagctttcacctagtctagtcagcttttggttggaattgctttcaactggttaatcctgtccggtttgtggagtgctttggggggggggggggggggggatggtggctgtcgtaatcttagattaatttaattttcttggagatagtgtgctgtactcttgttatcagtattgaaagcacgactagatttttatgtgaggatggtgaagcacttctggaccatgtcaaatgactgaacatagctacggccagtttatttctgtactatatatttttgaaaattgctagagggcttgaatttccatccctccaatttgttgcagggattggtactccggttctttctccggcacactaatctctcacaacaatgtatattagtgtgggttggtgtggagaggtggcgccctacgctggtggtaggcgggggttggcaagggggtgtatacggtggtgttggtgttgggagtgggttgtggggggagggggagtagggattcagattgggtgacatagggtgaatctcgaccctccaaaacaaatccaacagcttagattcgtccacgtcatcatgagtaaaaattttattcccagtaaaacttttactccaggaattttactcctagtaaaatttttactcctgagtaaatctgcgagtaaaatttttactcgtgatgacgtggacgaatctcagccgttggatttgttttggagggccaagattcaccctatgtcaccttgtgacatgtctaccctatgtcacccaatcccgctagaggcgaagaaggaggatggcgtaggagagactagagatgagtaagacgatgaagcagtgacgccgtgatggctcactggaaaggaggaattttaagtgtcggattgctgtacaggaatgcctgcacaagctaggtgtgtctagtggtttttgtacatgattgtgcgatatctatgggcctgcaagagtttcatatctgtgcatttagtgaattatattttttactgaaacatacttttttgtgtgactattttcagtacttatgatatggtttagcatatgaccaatctgtacgatgaaaatatgcaggaactcataaaaagtcatgggaaatgacgaagctgtagttactcagaagatggggaaagcaccatcgccccctaaggtaaacgcatataagtagataaccaaggccaaatatgggcacagacaacattgcacgagcaagatgtcaaattgattattggcatttcttcttttatttgacaacataaatccgctttgaggttttagatgtgctagggctgcatcaaacagctgcgaagcatgattttgtcaattagccacattattgacaaggggtggaatccttaaaggtgcctaagtagcaactgtattactttgcaggatcatccagcccttagtccataccttgattggtcaaatatgcaggttaggtgtctgacaatctatattttcctgataactgaagtttggattttcctttgaactgagtaactaaatttaaggtatcataatcaacacaggcatattacggcccagggatcttgccaccaacattttttagccctggaatagccgctggtcatacccctcctccatttatcttgggtcctcaggtttttgactttactctccatgtatcaggtgtcattcttatctttaagagttctaagttatttccctgtgcctctacagcctctggtgccatccgcttttgggaagccatatgccgcaatttatcctcctggtggagctttttcacatccgttcatgcccctagtaagcatttcattttgttcacctatctatttttcagaacattgcatttaactaaacatggaaggcaccatggatttgagtcaactatcacgctttggaattaaagcgatatccaatttgttaaaatgcttgcataaagccatgttaacatggaaacttctctatgagcagaactaacacgaatgatttctgccgttcgaagtattcatgatatgtagttggaacttggaaaacctatccttgcagacgaattatctctacatgaaaataaattcattcatatattgccattttttctgtagaaggaagctggattttttatttttttttcttctgtggaagtatatatgtatttttaaatcatttgttcaattgttcttttctttaatgtctttcttgcttcacttgtgtgaacgttctgtgctgaattgctaatcgttttgctagtatcttaattatgcttctgttattgattgtttatcttatattttttatcaagatggtgagcccattgagcatggagccagcaaagtctgtcaacagcaaggatagctgttcaaataagaaaatgaaggaaattgatggtgcggctgtgtcaactggcagtggcaacagtgaaaaaacaaggtgatacaggattttacaaaatgaaaacgataaccagattgatagttcaacttatatacaactattatgagtgacaaactgatttcatgtgcatctgatgctgccaatgcagtggagattgcagcttagaaggatccagtgatggaaacaaccagaaggtattgttctgtagttatttaatgccattgaagatgttctgagccagcaagcttatacttaacatgctgatatatttcatcattattcaggcaagtggaactcccaagaaaaggagcatagatgataggcctaaatcaggtactcaatcttggtatcatctggtacttgatttttataatatccagttcaatgactcatcgtgaattttgcggcatttcttgttatttctctaattgataactgaaacataatataatcctctgtttaagttttcagatgataagaaggccatatattctgagcactaagcaacactaagaggtgatttggtttttgtttttccttttctccaggcgtggaaactggtggagctttaacacctaatgatagacctagcgaacaagcagctttgccaaatctatgcattccggttacagcaatcaaaccagacgtgagcactgctagtgacttcagagttattgccaccccagtaactgaagtgccaactaaggtatgccagttgcagttttttttcttgttaaagtgccagcaaattatcatttagaaaaggcgccactaacttcgtggagtgaaccatgatccatacttggacgaagcaatcaaatttcttaatgtttccactaccacgacttcagtagaacatccttttttttttgagaatacaacatcccttatttattactgctgttattttttgggattaattctcgagtcgctagtatggttttgctaaatagattgctggagctctttgcattctttttcttttaaaaaagaactacacattcattccagagagaaacagaacaagacccgtcccagaaggacaccctgagatagcaacaaaacacctcaccaaacaccactgtcaggacacctaaatgcaaagtacctagatactcaataaaaaatgagattcactcttgagatcaggaattttcagctttcgattcatgggatcgtttcttcttgaattaaactatagacctataatccttaataaattgtcaggatgataaggaatcgaagcgcgagagaaggaagcaatcaaacagggagtctgctcggaggtcaaggttgaggaagcaggtataataagatgcttagctagttttaacttgtaatgttttgtggtatccccttcagtattccatactctagtagaaatttaaaccatacttgtacaataatgatattctttcattctaacaggccgagactgaggaactggctagaaaagttgagctattgactgcggagaacacatcccttagacgtgaaataagcaggctaacggaaagctccaagaaacttagattagagaattctgctctaatggtaaacatcttttctaacaatatgatcattggagtattggagctattttcattgagcactagtccttttttttcttctctcaaatgcgccttgtttaacaggagaaactaacggaaaccgggcctgatgaagcacaagaagtgcctccagtcaaaacaaaagcacagcaagctcgaggcgtcgaaaatttcctgtcaatgatagacaagactggcacgccgagaagcagcgggcacatggatcatgccattgccacgcccaagcttcgtcaactcctgggctctggtctggcgactgatgctgtagccgcaaggtaatcttaacgacttgaccctcccgccgttcgtgctcaaacgcagcatgtggcctggtgaattttataagctcaacctgcccgcacgattaacatcgaagtattaggtacgattttgtcactgtattcgcccttgtaaattactagtagctgccttttagacgagcattccaaccgctccaccgggatatgaatgcccccctggccgtcagttcttccctgagtttttactctactctcgtagatctgtaacatcagtgctggctcgcgttgttcatatcaaactgatctctgtaaatactgtaacactgacagaaagccttctaactttgatcttttaccttt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0658900, RefSeq:Os01g0658900