Os01g0659200

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Revision as of 04:52, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0659200| Description = Similar to Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E subunit) (Vacuolar proton pump E subunit)| Versi...")
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Gene Name

Os01g0659200

Description

Similar to Vacuolar ATP synthase subunit E (EC 3.6.3.14) (V-ATPase E subunit) (Vacuolar proton pump E subunit)

Version

NM_001050302.1 GI:115438974 GeneID:4327166

Length

4648 bp

Definition

Oryza sativa Japonica Group Os01g0659200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:28567718..28572365

Sequence Coding Region

28567917..28568018,28569718..28569818,28570464..28570620,28570974..28571170,28571776..28571875
,28572089..28572124

Expression

GEO Profiles:Os01g0659200

Genome Context

<gbrowseImage1> name=NC_008394:28567718..28572365 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:28567718..28572365 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaacgacgccgatgtcgccaagcagatccagcagatggtgcggttcatccgccaggaggccgaggagaaggccagcgagatctccgtctccgccgaggaggagttcaatattgagaagcttcaacttgttgaagctgagaaaaagaagatcaggcaagaatatgaacggaaagagaagcaagtcgaagttagaaagaaaattgagtactctatgcagctgaatgcttctcgcatcaaagtgcttcaagctcaggatgatttggttaattccatgaaagaggatgctacaaagcaactcctgcgtgtcagccacaaccaccatgaatacaagaaccttttgaaagaactcgtcgttcagggtttgcttcggttgaaagagccagcggtacttctccgttgccgcaaagaagaccatcatcatgtggaatctgtactgcattcagcaaagaatgaatatgcgtcaaaagcagaagttcatcacccagagatacttgttgaccacgatgtgtacctaccgccttctccaagctctcatgattcccatgagaggttttgctctggaggtgttgtgctggcttctcgagatggaaagattgtgtgtgagaacacacttgatgccaggctggaagttgtcttccgcaagaaattaccggagatccggaagcttctttttggtcaggtgacggcataa</cdnaseq>

Protein Sequence

<aaseq>MNDADVAKQIQQMVRFIRQEAEEKASEISVSAEEEFNIEKLQLV EAEKKKIRQEYERKEKQVEVRKKIEYSMQLNASRIKVLQAQDDLVNSMKEDATKQLLR VSHNHHEYKNLLKELVVQGLLRLKEPAVLLRCRKEDHHHVESVLHSAKNEYASKAEVH HPEILVDHDVYLPPSPSSHDSHERFCSGGVVLASRDGKIVCENTLDARLEVVFRKKLP EIRKLLFGQVTA</aaseq>

Gene Sequence

<dnaseqindica>200..301#2001..2101#2747..2903#3257..3453#4059..4158#4372..4407#gttgccccgcgcggctagaccgctagtagactagtcccacgactccccatccctcctccctctctcgaccactcccgtggactcctctctcctccccttccctcccctcccccgcgcgcggtggtggttcgccggagcgcagcagcagcagcagcaaaaggccgcgagggccgccgtcgggatccccgccgccgccaagatgaacgacgccgatgtcgccaagcagatccagcagatggtgcggttcatccgccaggaggccgaggagaaggccagcgagatctccgtctccgccgaggaggtcagtacttacccctcccctcgcctcgcctctcccccgcgcgtcgaagcttcgggaagcctctcgatccgcgcctccgaagcttttcacccgcccgatctgcctggtgcccccccgtgatctcgaagcgtcgagagctagaagttgatacttgatcctaccttgtttccgaggatccgagcggtttgactgttaggtttcggtttctgggacgagaattttgtagtcgaagcgtctaggcaataggctccctggttccgaggtagatcgagaggaatcgggatccggggtgtgtcgcttgagcagatctcggtgcgtggatctagaagcttccagatcacgagtttctagtccaataaagctcgttttcttactttggactaggaagtactgccacactggatggtcaattgttccgtttccgcccttctctgctactggttagtccgtacctgaatccagttgtggcttgaattgcgataagagaggctagtctaatccaaaggtctctagatcattctagaagcgagatttgggcttaagatgaactgaaacttgaatagggtatgcttgatctgttcactctcccatttcgcttctagattgtgctagaagcacaattggaggataaggttaacaatgagaagacggaaagaggtactaatacatggttaaaggaaatccttgcaacaactggtcaccaccctccatcacctgccaacttatgagctgtagttatccattaccattaaccagccataaacttttttattccttttttttatgtcaatgcaatcataatggagataggatgcatgaacacctctattgcttgttggcatgatgggttggccatgatgaatgtcaagcaacatacttgctgagtgggctgctactgttatgatcatttttacttgctctagcttgtcatttcagctgaatacaactgatccacctgcatggtttgatcgatcaccccttggtgtgcatgattggcaatcatgtttgctaccaacaagcatcatcaattgtgcaatcatgtatcacgccttttactatcataaggtccagcggacatgaacatgtttaatatgctttctgactacaactgtgctggaagtatgatttattcttgaagcaacaggggcatcctcatgtttgtaataaaagaaagtttcattacaatgagttattaatcttctggaaatacatgcttgttttgtttgcgtgtccattcttttcaaccccaccttttatcaataccaatgactgacaacaggtacttgtttgacgagtcagttgttcagattttagtaggctgtttggctttagaaaccaaaccatccagtatgtcttgataaatcatgggatgatcccatgaattttcgtgggatgatcctttcctcacttctccactaagtgtgtttttgagggataggtgatgatggtcaaacccattccgttcctcaaagtaaacaagtcatataggactgagttgtcaattagctccttagttggctgtgtgcatccttatttgatgcaaggcagagttatacttccatcatccgaaaaaaaaggctcaattaaccatctcattcctcaaaccagataaaccactatgcctttatcattgctgacagttggttaaccattctgatttccttccatatgttaacttatttgtataatgtgtttgcaggagttcaatattgagaagcttcaacttgttgaagctgagaaaaagaagatcaggcaagaatatgaacggaaagagaagcaagtcgaagttagaaagaaaatgtgagacttcgattcctcaaattatttatgttttcctgtgttctccgtatggtcccattaacagcatttcatgttgaggatttctgcagcatacagtacattacatcaatgcctcaatacattttagatacagctggaatgctggattctcatttgtgtgcaacattagtagtaaaagctagctacaaactacttcagccacatggttaaattggcagtaatcgtaatttgactgcactggttgttgagacacttaaaaatcaaattcggatgtgtagttcagtgcagtaaacttcactgatgagtcgactgtattttattttttagacaaaattgtgtgaactgctgcttgcagttcaatgtctgttgaagtgagagtatgtatcaatcatgatctggatgtaataaaagttgtacattaacaatcttacgatggaaaaagttagagaactatttgacaaaatggtaatacaaagtacaaactgacataacatgcatactcaaacattgtttaccttccttgcgtattacatttaatatggtactgattgcttgttagcataggtttcatagaatccacctgtatcactatttctgggtttatccatttgttaactgatgaggccttgttttctcctttatcagtgagtactctatgcagctgaatgcttctcgcatcaaagtgcttcaagctcaggatgatttggttaattccatgaaagaggatgctacaaagcaactcctgcgtgtcagccacaaccaccatgaatacaagaaccttttgaaagaactcgtcgttcaggtttgtatgaaatgttgaatacatcatctgctagattcttatccattaagcctttttgagcgatccttctgataattgtggaccccaagagggtttcacctatatagttaagttcgatacgcagaactgaattattggatattgaagtgttaaatcacattgtagttttgcaactctaactgcatgcacaaaagagctagtgctaaaagaacatctgtttatgattcacctttaaacttctcttatggacgtgtcaatttaattgatggaattaagtttgaaatgccatctccttgtttgttcactactgttattaacaaaataatcattcatcatattgactggaaatacagggtttgcttcggttgaaagagccagcggtacttctccgttgccgcaaagaagaccatcatcatgtggaatctgtactgcattcagcaaagaatgaatatgcgtcaaaagcagaagttcatcacccagagatacttgttgaccacgatgtgtacctaccgccttctccaagctctcatgattcccatgagaggttttggtaataaatagtttcttacccttgcagcctgccaatttgctactgtatatctgtactactagtaacagtctagcaaatatactaaaagaaagaaagctatcttttggactaacagataatctgctcagtaactctacaaacatgtataatttggaaaataacatcaatatgagtatacaggtcggtcttgggcctgttaatcagaagtttagtgctgaagactttaactctaccctgacctggacaatcagctcttatctggctattgctttggcatacattatgacatttattgaacagttgatatgctgaatagtgtaatactgcactaggttaagccacaaatacatccgtctaccttaaaactgattgaatatgggaagagagcactacagctcctgatatagcataatgaagtgatcattggcctgttgcagctctctctctctctctctctctctctctctctctctctgcatgttctagtataggacagcagttgggatttgaaatccatagcttcgtttcaatttcaatacttttactgtagttcttaatcctgatatggatcctgctgtttatgctaatataatgtgtttatgcagctctggaggtgttgtgctggcttctcgagatggaaagattgtgtgtgagaacacacttgatgccaggctggaagttgtcttccgcaagaaattaccggaggtgccttcgtttagctcgattttaatattcattttgttccaccaattccaaagtttcaaccatgtatacaagtagttcagtaccactagaacatttaaacatgatttgcatgttcttatttgtcaatttaacaatgaccctgataggctacagcacatgcagagcaaatggttataccttcatattttcattcttcttcccgtttccttgcagatccggaagcttctttttggtcaggtgacggcataatctgtgcatgtaatttcagctgcggtatagctgcttccatgtaattagctgcaggttcgaacctgcagctgcaaggaatttcacctgtttgtgccaaattgattgtttaaagtattcatccgctatgtaaaacactacctatttgttcattattatcgccgagcaccaactattcgcacgcttgtttgctcagaggtataataataataataaaggacggtcaaacgttccattgctgtgt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0659200, RefSeq:Os01g0659200