Os10g0498000

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Revision as of 08:43, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0498000| Description = Similar to Epoxide hydrolase| Version = NM_001071499.1 GI:115482741 GeneID:4349014| Length = 1805 bp| Definition = ...")
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Gene Name

Os10g0498000

Description

Similar to Epoxide hydrolase

Version

NM_001071499.1 GI:115482741 GeneID:4349014

Length

1805 bp

Definition

Oryza sativa Japonica Group Os10g0498000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:19446513..19448317

Sequence Coding Region

19446727..19446973,19447103..19447338,19447481..19447642,19447913..19448130,19448230..19448302

Expression

GEO Profiles:Os10g0498000

Genome Context

<gbrowseImage1> name=NC_008403:19446513..19448317 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:19446513..19448317 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatcagaggattgagcactcctacctgcccatcagaggcctgaagcttcacatagctcacattggaaaaggtgaagctgcaactctgctcttcgttcatggcttccctgaggtgtggtactcatggaggcaccagatgattgcagcagcagcagccgggttccgtgctattgcacttgatttcccaggctatggcctctcggagccaccggctgacctaacacaggcgtcatggcagggcctgatgaatgacctcttggccattctagactcgctgtcgattcccaaggtgttccttgttgcaaaggattttggagtcaaaccagcatatgatcttgccctctgccatccggaccgcgtatgtggtattgtgagcttaggtgtgccacctcttgtggaaagcctcagtttcagtggacttcctgagggattttacatacacagatggagggaacctgggagagcagaggcggattttggccgattcgacacgaggaggatcttgcgcacaatctacatcctcttctccaggagtgagattccagttgccaagcaaggacaagagatcatggaccttgcagatgaatcaacaccgatgcctcagtggttcaccgaagaagacctctcagcttacaccgacctgtatgagaaatcaggtctcatgactgctatccaaattccatataggaccaaggctgcaaaagcagaaggtgctaatccaaggtttgaaatgccaatgtttgtgattatgggtcagaaagactacatcctcaagtttccagcactgaaggaatatatgtcaagtgaaaaactgaaagaaattgctccagactacgggatcacttacatcccagaaggatcccattttgttcaggagcaattccctgacctggtgaatcagcttgtgatagacttcgtcagtaaacatgcatga</cdnaseq>

Protein Sequence

<aaseq>MDQRIEHSYLPIRGLKLHIAHIGKGEAATLLFVHGFPEVWYSWR HQMIAAAAAGFRAIALDFPGYGLSEPPADLTQASWQGLMNDLLAILDSLSIPKVFLVA KDFGVKPAYDLALCHPDRVCGIVSLGVPPLVESLSFSGLPEGFYIHRWREPGRAEADF GRFDTRRILRTIYILFSRSEIPVAKQGQEIMDLADESTPMPQWFTEEDLSAYTDLYEK SGLMTAIQIPYRTKAAKAEGANPRFEMPMFVIMGQKDYILKFPALKEYMSSEKLKEIA PDYGITYIPEGSHFVQEQFPDLVNQLVIDFVSKHA</aaseq>

Gene Sequence

<dnaseqindica>1345..1591#980..1215#676..837#188..405#16..88#ggagagaacatatcaatggatcagaggattgagcactcctacctgcccatcagaggcctgaagcttcacatagctcacattggaaaaggtctgaatcttacctcatttttgttgacatcagcatctctctgcttttttttgctcttccgaaagaatgcagctcagcttcttgatttggttattccaggtgaagctgcaactctgctcttcgttcatggcttccctgaggtgtggtactcatggaggcaccagatgattgcagcagcagcagccgggttccgtgctattgcacttgatttcccaggctatggcctctcggagccaccggctgacctaacacaggcgtcatggcagggcctgatgaatgacctcttggccattctagactcgctgtcgattcccaaggtgagtacaggcaggagaaaacattgagatccaataaaagtttatgcaaatgctaagatgaaccccaagtctctaacgcattttgataactatggcaaacatgaaataagtcagaagctgatgtaaattagaacttgccccattggcaaaattggttatggtttcatccatgcattattttacttgattattgataagtttgtaaattggcttaatttttgaaaagaagtactgtatcctgacgagtgacgatcatttcatggttgaaaggtgttccttgttgcaaaggattttggagtcaaaccagcatatgatcttgccctctgccatccggaccgcgtatgtggtattgtgagcttaggtgtgccacctcttgtggaaagcctcagtttcagtggacttcctgagggattttacatacacagatggagggtaaattaattaaacactcatcgatcaagtttttattctttctgactatttggtaaacacagtttacagtcaatacatttatactgaacataggttttgcaattctgattgatgttgtgatgcaactatgttacctgagtaggaacctgggagagcagaggcggattttggccgattcgacacgaggaggatcttgcgcacaatctacatcctcttctccaggagtgagattccagttgccaagcaaggacaagagatcatggaccttgcagatgaatcaacaccgatgcctcagtggttcaccgaagaagacctctcagcttacaccgacctgtatgagaaatcaggtctcatgactgctatccaaattccatataggtgagcacatgcaaaaaacacaacaaaatatgacaagcaattctcagtgtcctgatatgatgctattacaattactttgatacttgtacaaacctaaggatgttactaacacttgtgttgatttaataggaccaaggctgcaaaagcagaaggtgctaatccaaggtttgaaatgccaatgtttgtgattatgggtcagaaagactacatcctcaagtttccagcactgaaggaatatatgtcaagtgaaaaactgaaagaaattgctccagactacgggatcacttacatcccagaaggatcccattttgttcaggagcaattccctgacctggtgaatcagcttgtgatagacttcgtcagtaaacatgcatgagatagcaacaaaaacaaggtgcaatttgacaaatccccagactgcaaaaggtaacagttgagcactgcgttcactgatgtgcaccactaaagagttgacgttgtaacgtcgtgctcatgatggtatcgcaaactattttagtgttgtataaataaatgtgcaactgaagaaaattatcctctttttttcagatttaatactacaaatttgtacc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0498000, RefSeq:Os10g0498000