Os01g0660200

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Revision as of 04:52, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0660200| Description = Acidic class III chitinase OsChib3a precursor (Chitinase) (EC 3.2.1.14)| Version = NM_001050307.1 GI:115438984 GeneID...")
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Gene Name

Os01g0660200

Description

Acidic class III chitinase OsChib3a precursor (Chitinase) (EC 3.2.1.14)

Version

NM_001050307.1 GI:115438984 GeneID:4327172

Length

1236 bp

Definition

Oryza sativa Japonica Group Os01g0660200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:28641330..28642565

Sequence Coding Region

28641408..28642313

Expression

GEO Profiles:Os01g0660200

Genome Context

<gbrowseImage1> name=NC_008394:28641330..28642565 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:28641330..28642565 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctgctaataagctcaagttctcccctctccttgccctcttcctcctcgccggcatagccgtcacctcccgtgccggcgacatcgccgtgtactggggccagaacggcgacgagggcagcctggccgacgcctgcaactccggcctatacgcgtacgtcatggtcgccttcctcagcaccttcggcaacggccagacccctgtcctcaacctcgccgggcactgcgaaccaagctccggcggctgcaccggccagagctcggacatccagacgtgccagtcgctgggcgtcaaggtcatcctgtccatcggcggcggcgccggcagctacgggctgtcgtccacccaggacgcccaggacgtggccgactacctgtggaacaacttcctcggcggcagctcgggctcccggccgctcggcgacgccgtgctggacggcgtcgacttcgacatcgagaccggcaacccggcgcactacgacgagctcgccacgttcctgtcgcggtacagcgcgcaggggggcggcaagaaggtgatcctgacggcggcgccgcagtgcccctacccggacgcgtcgctggggccggcgctgcagacggggctgttcgacagcgtgtgggtgcaattctacaacaacccgccgtgccagtacgccaacggcgacgccagcaacctggtgagcgcgtggaacacgtggaccggcggcgtcagcgccgggagcttctacgtcggcgtgccggcggcggaggccgcggcggggagcgggtacgtggcacccggcgacctgacgtcggcggtgctccccgccgtgcagggcaacgccaagtacggcggcatcatggtgtggaaccggttctacgacgtgcagaacaacttcagcaaccaggtgaagagcagcgtctga</cdnaseq>

Protein Sequence

<aaseq>MAANKLKFSPLLALFLLAGIAVTSRAGDIAVYWGQNGDEGSLAD ACNSGLYAYVMVAFLSTFGNGQTPVLNLAGHCEPSSGGCTGQSSDIQTCQSLGVKVIL SIGGGAGSYGLSSTQDAQDVADYLWNNFLGGSSGSRPLGDAVLDGVDFDIETGNPAHY DELATFLSRYSAQGGGKKVILTAAPQCPYPDASLGPALQTGLFDSVWVQFYNNPPCQY ANGDASNLVSAWNTWTGGVSAGSFYVGVPAAEAAAGSGYVAPGDLTSAVLPAVQGNAK YGGIMVWNRFYDVQNNFSNQVKSSV</aaseq>

Gene Sequence

<dnaseqindica>79..984#accaccaagcaaatcacgtagtccctccacacacctcgtacctcgatctcgaagcttaattactagttaacattaacaatggctgctaataagctcaagttctcccctctccttgccctcttcctcctcgccggcatagccgtcacctcccgtgccggcgacatcgccgtgtactggggccagaacggcgacgagggcagcctggccgacgcctgcaactccggcctatacgcgtacgtcatggtcgccttcctcagcaccttcggcaacggccagacccctgtcctcaacctcgccgggcactgcgaaccaagctccggcggctgcaccggccagagctcggacatccagacgtgccagtcgctgggcgtcaaggtcatcctgtccatcggcggcggcgccggcagctacgggctgtcgtccacccaggacgcccaggacgtggccgactacctgtggaacaacttcctcggcggcagctcgggctcccggccgctcggcgacgccgtgctggacggcgtcgacttcgacatcgagaccggcaacccggcgcactacgacgagctcgccacgttcctgtcgcggtacagcgcgcaggggggcggcaagaaggtgatcctgacggcggcgccgcagtgcccctacccggacgcgtcgctggggccggcgctgcagacggggctgttcgacagcgtgtgggtgcaattctacaacaacccgccgtgccagtacgccaacggcgacgccagcaacctggtgagcgcgtggaacacgtggaccggcggcgtcagcgccgggagcttctacgtcggcgtgccggcggcggaggccgcggcggggagcgggtacgtggcacccggcgacctgacgtcggcggtgctccccgccgtgcagggcaacgccaagtacggcggcatcatggtgtggaaccggttctacgacgtgcagaacaacttcagcaaccaggtgaagagcagcgtctgagctatagcctcaacctcaagcccccaagcctgagtaattaacttacgtgacacgtatacttattacttgcacagtggttgagttggactataaataagaggagatccgttcatacgcatctgtaatatagtagtagtaataagcagttatgtatgcacaacccacatggtgtactttgtgtaactctgtgtttgatcatgggagtgtatttgccgatataaattaaataaggagaatgatttgcattaagcc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0660200, RefSeq:Os01g0660200