Os01g0662700

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Revision as of 04:52, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0662700| Description = Similar to Naphthoate synthase (EC 4.1.3.36)| Version = NM_001050319.1 GI:115439008 GeneID:4327859| Length = 3699 bp...")
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Gene Name

Os01g0662700

Description

Similar to Naphthoate synthase (EC 4.1.3.36)

Version

NM_001050319.1 GI:115439008 GeneID:4327859

Length

3699 bp

Definition

Oryza sativa Japonica Group Os01g0662700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:28806722..28810420

Sequence Coding Region

28807141..28807257,28807430..28807552,28807654..28807749,28807911..28807958,28808948..28809046
,28809142..28809180,28809620..28809721,28809813..28809935,28810123..28810371

Expression

GEO Profiles:Os01g0662700

Genome Context

<gbrowseImage1> name=NC_008394:28806722..28810420 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:28806722..28810420 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgcggcggggaggaggctcgcccgcgtcacggcccacctcctgcccagctccctcccgctcccgctcgcctccgcccctaccctcgcgccttcccccgccgcgtcgccagcgtcggacagctaccgacgggtccacggcgacgtgccgtcggagcccccggagtggcgcgcggcgacggacgagtccgggaagggcttcgtggacatcctctacgacaaggccgtcggcgagggcatcgccaagatcacaataaaccgccctgatagaaggaatgcattccgacccctgaccgtgaaggagcttatgcgtgctttcgaggatgctagagatgatagttcaatcggagtcatcatactaacagggaaggggacccagtccttctgtagcggcggtgaccaggcgttaagggatgctgatggatatgttgattttgatagctttggcaggctcaacgtcctagacctccaggtgcaaatacggcgccttccaaagcctgttatagcaatggttgctggttatgctgttggaggaggccatgtgttgcacatggtgtgtgatctaacgattgcagctgacaatgcaatttttgggcagacaggtcctaaggttggaagcttcgatgctggctatggcacttcaattatgtctcggttggtaggaccaaagaaagctcgtgagatgtggtttctgtcacggttctacacagctgatgaggcagacagaatgggtctcgtcaatgtagtagtaccactcgctgatttggagcgagaaacggtgaaatggtgccgaaaaatcttgaggaacagtccaacagccatccgggtgctgaaatctgcactcaatgcagctgatgatggccatgctggccttcaggagctcggtggcaatgcgacactgatcttctatggaactgaagaggcaaaagaaggcaaaaatgcatacatggagcgacggcgccctgatttctcaaagttccctcggaagccttaa</cdnaseq>

Protein Sequence

<aaseq>MDAAGRRLARVTAHLLPSSLPLPLASAPTLAPSPAASPASDSYR RVHGDVPSEPPEWRAATDESGKGFVDILYDKAVGEGIAKITINRPDRRNAFRPLTVKE LMRAFEDARDDSSIGVIILTGKGTQSFCSGGDQALRDADGYVDFDSFGRLNVLDLQVQ IRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIFGQTGPKVGSFDAGYGTSIMS RLVGPKKAREMWFLSRFYTADEADRMGLVNVVVPLADLERETVKWCRKILRNSPTAIR VLKSALNAADDGHAGLQELGGNATLIFYGTEEAKEGKNAYMERRRPDFSKFPRKP</aaseq>

Gene Sequence

<dnaseqindica>3164..3280#2869..2991#2672..2767#2463..2510#1375..1473#1241..1279#700..801#486..608#50..298#cacaacacaaggcgttactccggcacctcccgcctctctctccctcgccatggacgcggcggggaggaggctcgcccgcgtcacggcccacctcctgcccagctccctcccgctcccgctcgcctccgcccctaccctcgcgccttcccccgccgcgtcgccagcgtcggacagctaccgacgggtccacggcgacgtgccgtcggagcccccggagtggcgcgcggcgacggacgagtccgggaagggcttcgtggacatcctctacgacaaggccgtcggcgagggcatcgccaaggtgaagagctgtaacgaatttaatctgtgttatgccaaattgccaatttaatcgctgtagtgtacagcacagtttagctccctttgttgaattgctaagaccgatctcttttgttgattagcattatagtgtgtgttcatctcccatttcgtgattggctgattcgcaatcgcgattcctgttgcagatcacaataaaccgccctgatagaaggaatgcattccgacccctgaccgtgaaggagcttatgcgtgctttcgaggatgctagagatgatagttcaatcggagtcatcatactaacagggaaggtaactatgctagagaaatcattaggtattcaggttccagctggtacgcaatgtgaatgaaatacttactttgatgttttttgatggacaggggacccagtccttctgtagcggcggtgaccaggcgttaagggatgctgatggatatgttgattttgatagctttggcaggctcaacgtcctagacctccaggtcatacgcattactctgacatttgcacacactgattgactatctcataaaaatatattctcgcacctcataacaagcttctggtgctccatgtgctgttttttcaaaagcattccgtgcaagtattcgagggctcagttttgtagctgaggttggatgtactactctcctctgtatgtttatctaatctttaggccaaagcctcttttcaggataaaattcatttttagattactaggcttcaattctgagtgtgttcaatgttcatgatattcttatatgagcttccataaactactctattttggtggtacttcaagtcctacatgaaaactacttgttcacattgttgatgtcttatgttccactgttcactcatcaaaccccgtacagaatgatgtttttagctctgagcagaatgtacattttgtttcttcaggtgcaaatacggcgccttccaaagcctgttatagcaatggtattatcatcactattgtgtttttcccctcatttaaccattctacattagtactacatttctaaatgttaaatttggtgctcatactatatcaggttgctggttatgctgttggaggaggccatgtgttgcacatggtgtgtgatctaacgattgcagctgacaatgcaatttttgggcagacaggtcctaaggtgtttttctggcctgttattacttcctgtatataggcattacacgttgctattataaaagttagtcgatatagcggaacgacgttagttgctatcacagtatcactcaaagttctgatgcaacttctgttacaacaatctaatttgtcttgacatttcttttttccttttttcccaccgggccagcgacagaaccggccaaatgcagtaagatttaaagatggaattacataaagctagagtccaacgacatgattgttgggaggtgtattgacctttctctagcatgtagaggtccttgtgcttgctttagtagcactgatgaatttcagctatgccacctaaagaatatgataactttggtttcaccgtagtacatctaagcttctataagcttattcagactttgattaaatgggaaaattttgtcactgaactactagtgcaatcaaatgttaatgaaagtaggttgaatagcttggtgtttgggctatgcatcaagaacacacggtgcatttaggctctgtttgaaagcccgtttagcttttgctttactgccagactgccacacatgaaacgaaaaatatcattagcatatgattatttaattattaactattacaaactcgaacaattggtttatttgatttttcaaagaaacttttgtataaaaagtttttgtaaaagacataccgtttagcaatttgaaaaatgtattcatggtaaacgagggagttgtaaaagctaaacgaggtttcaaacattgtttccttgtagtttgacagtttgacccttagcgggattcgtgattacctgtgtgctatagtacttttaagagtaggttatctgaatggtctaatctgagttgctttttttttttgcacttatcttttttttttctgaaagattttttttgcttttcttattcagagtaaattttatcagtgaaacgcaaagcttactttaccttgtctctctgatttatacaggttggaagcttcgatgctggctatggcacttcaattatgtctcggttggtaagtcaatgaggtgcatgtcctcaatagagcttttgtgtcattgcgtaactttccatatgaccatatcatgcattgaaatcccctatccaaaacatcttcattttttcagaaaatagtaagatgtttctgtctctctttttttttcctgtctcggacaggtaggaccaaagaaagctcgtgagatgtggtttctgtcacggttctacacagctgatgaggcagacagaatgggtctcgtcaatgtagtagtaccagtgagtgcccgaggagtttacaactaatgcacagtctctaactctctatgactcatgccaggtgtttatgcactaaccgtatacattctttgtgcatatagctcgctgatttggagcgagaaacggtgaaatggtgccgaaaaatcttgaggaacagtccaacagccatccgggtgctgaaatctgcactcaatgcagctgatgatggccatgctggccttcaggtactagcaccattcatcgaaagccagagataaaactacagctcctttcttcctcctttgtaattgctgtagtaaaaaaacaatcctccttttgcctctttcctgaacatacttaccccttggatgcttgagtttattggaaccactgatgcaatcggcgcttctgctgcaggagctcggtggcaatgcgacactgatcttctatggaactgaagaggcaaaagaaggcaaaaatgcatacatggagcgacggcgccctgatttctcaaagttccctcggaagccttaaaagttgaacttgtgcactactagtacagatttctctacaattctgctgtatgtcatgacgcagactgaaatgctactcaaatctccgtttcctcgtcaactctgccggaagcataggtgggcgtcccaatgattgccagccccggtggacgggtgtagaagcgagatcgttatcctttacatgtcatttgttagttggcatttttataggtgtaaattgcagtgcttacgtatatgtgaatattcatcccgacatatcatagccgctggaaataaatggccttgtggtgcattagttatttgatcctataacaattggcctatatttatttttttgctggttgttttgtttgcttttcaatttattttaataactttttcaaggatatttatctgtaagaatttggatgtggcttgttg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0662700, RefSeq:Os01g0662700