Os01g0663400

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Revision as of 04:52, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0663400| Description = Similar to Aspartic proteinase oryzasin 1 precursor (EC 3.4.23.-)| Version = NM_001050321.1 GI:115439012 GeneID:43278...")
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Gene Name

Os01g0663400

Description

Similar to Aspartic proteinase oryzasin 1 precursor (EC 3.4.23.-)

Version

NM_001050321.1 GI:115439012 GeneID:4327861

Length

6411 bp

Definition

Oryza sativa Japonica Group Os01g0663400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:28841673..28848083

Sequence Coding Region

28841850..28841934,28842250..28842338,28843128..28843247,28843326..28843482,28843755..28843819
,28843911..28844024,28844702..28844766,28844892..28844931,28845026..28845194
,28845528..28845640,28845731..28845825,28847102..28847162,28847266..28847661

Expression

GEO Profiles:Os01g0663400

Genome Context

<gbrowseImage1> name=NC_008394:28841673..28848083 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:28841673..28848083 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggtacgcgacgcgtagggctcctcctcctcctcctcctcgccgccgtactgctccagcccctcctcgcggcggcggcggcggagggcgtggtccgcatcgcgctgaagaagcggcaggtcgacgagaccggccgcgtcgggggccacctcgccggggaggatgcccagcggctcctcgcgcggcgccacggcttcctcaccaacgacgccgccagggccgcctcgaggaaggcgagggctgaggccgagggcgacatcgtggcgctgaagaactacctcaacgcgcagtactacggcgagatcgccatcggcacgccgccgcagatgttcaccgtcatcttcgacaccgggagctccaacctctgggtgccttcctccaagtgccacctctcgattgcttgctacttccactcgaggtacaaggctggtcagtcgagcacgtataagaagaatggaaaacctgcttcaattcattatggaacgggtgcaatttctggctattttagtcaggacagtgtgaaagttggtgatgtagctgtgaaaaatcaggattttattgaagctacgcgggagccaagtattacattcatggttgcaaagttcgatggcattcttgggcttggatttaaggaaatctcggtaggaaatgcagtgcctatctggtacaacatggtgagacaaggtcttgttgttgatcctgttttctcattctggttcaaccggcatgctgatgaagggcagggaggcgaaattgtgtttggagggattgatcctaatcactacaagggaaatcatacatatgtccctgtcactaggaagggatactggcagttcaatatgggcgatgtcctaattggagggaattccacaggattctgtgcagctgggtgtgcagcaatagcagattctggaacttcactgcttactggtcccacggccataattactcagataaatgaaaagattggtgctactggggtagtcagtcaagagtgcaaggcagttgtttctcaatatggtcaacagatcctagatcagctgcgagcagagacaaaaccagcgaaagtatgctcttcggtcggtttatgtacttttgatggtactcatggtgttagtgctggtattcggagtgtggtggatgatgaagttggaaaatcaagtggtccctttagcagtgcgatgtgcaatgcttgtgagacagctgttgtatggatgcatacccaacttgcacaaaatcaaactcaggatctcgtattgcagtacattgatcagctatgtgaccgtcttcctagtcctatgggagaatcatctgttgactgcagcagccttgcatccatgcctgacattgccttcacaatcggtggcaacaagtttgttctcaaaccagaacaatacatcctgaaggttggtgagggaactgctacccagtgcatcagtggattcacagctatggacattcctcctcctcgtggtcctctctggatcttgggagatgtctttatgggagcctaccataccgtgtttgactatggcaacctgaaggttggcttcgcagaggcggcataa</cdnaseq>

Protein Sequence

<aaseq>MGTRRVGLLLLLLLAAVLLQPLLAAAAAEGVVRIALKKRQVDET GRVGGHLAGEDAQRLLARRHGFLTNDAARAASRKARAEAEGDIVALKNYLNAQYYGEI AIGTPPQMFTVIFDTGSSNLWVPSSKCHLSIACYFHSRYKAGQSSTYKKNGKPASIHY GTGAISGYFSQDSVKVGDVAVKNQDFIEATREPSITFMVAKFDGILGLGFKEISVGNA VPIWYNMVRQGLVVDPVFSFWFNRHADEGQGGEIVFGGIDPNHYKGNHTYVPVTRKGY WQFNMGDVLIGGNSTGFCAAGCAAIADSGTSLLTGPTAIITQINEKIGATGVVSQECK AVVSQYGQQILDQLRAETKPAKVCSSVGLCTFDGTHGVSAGIRSVVDDEVGKSSGPFS SAMCNACETAVVWMHTQLAQNQTQDLVLQYIDQLCDRLPSPMGESSVDCSSLASMPDI AFTIGGNKFVLKPEQYILKVGEGTATQCISGFTAMDIPPPRGPLWILGDVFMGAYHTV FDYGNLKVGFAEAA</aaseq>

Gene Sequence

<dnaseqindica>6150..6234#5746..5834#4837..4956#4602..4758#4265..4329#4060..4173#3318..3382#3153..3192#2890..3058#2444..2556#2259..2353#922..982#423..818#agagcagcagtctcgtctggagaagtggactagtggagtgtcgtgagttcttcgcttttgcttggctaaaatcgccgttagaaacttgtggaatcgagcaggtttaagaatttttctagtatccactctagatttgctttgttgtatgcttgaatcaaatttttttcgcttgatgatcaatttgagccaaaaacatgccgtttttctggtgattttttttctagcaactgctttgaaatttgtttcctgtttttttttctcaccaaagcaaatttgtaccaaatctcaccgaaattggcgatttagttgggcagttgatgccattgtttgtcgtcgaactatgcaatcccgatcgatttcgtgttcgtcgtctcgcctcctcgtgatccttctctccaccatgtgcagctcgccgcgcagccatgggtacgcgacgcgtagggctcctcctcctcctcctcctcgccgccgtactgctccagcccctcctcgcggcggcggcggcggagggcgtggtccgcatcgcgctgaagaagcggcaggtcgacgagaccggccgcgtcgggggccacctcgccggggaggatgcccagcggctcctcgcgcggcgccacggcttcctcaccaacgacgccgccagggccgcctcgaggaaggcgagggctgaggccgagggcgacatcgtggcgctgaagaactacctcaacgcgcagtactacggcgagatcgccatcggcacgccgccgcagatgttcaccgtcatcttcgacaccgggagctccaacctctgggtgccttcctccaagtgccacctctcggtgcgcgccgttctctttggttgccgcggttcaggggttttgttagtggtttggtagtgtttgtggtgctaattggagtgtccctttctgatgtttgctgcagattgcttgctacttccactcgaggtacaaggctggtcagtcgagcacgtataagaagaatggtttgtgctttctaccaatatcttctcagacttataatgttgtgttgcagtgtgatttagtagcaatcagtgttatctctccagttatattgataatctgatcgatcaatactctgttggtggcttggtgcctttcgcctgttcttatatagtagttctgttggctccaagtgagtaactgaattggcatgactaatttaaaatttcaggttgataaagtgcattaacatgaaaacttatttgaagcatatatcaaactagatgttttctgcaatttattaaattacgctgtttcttgtgcaattaatactctctccaaccacaaataggtagcaatttttgcatcaacatgtttgatcttactgctcatatacagtagaaaaaatatcaaatcactagtcagatttatgtgtttatgcccaaatggtacttagtgttggttggatgtttattaaatatgataaaagtatgatactgtgaaattatttttcaagataagtttatgcaacccatttttgtatgttggtatgtccaatataatgaatagagatatcgatagctgaagttatagtggttaattacacatgtcccaaaaacatcatatatttttatttaacttatttttttggagaacatgcaaaagggttgcatgtccttccattagatagagagagttccccaaagcgtgtttggttacagacctggctatataaaccctgggttacagatcataggtttatatcttgcgaaaaggttctaaacttcgatggcccttcatatcaccacggtttcggctcttgtatttttaacaagagggagtaatactgtaataagtttctgcagctatgtaattgtgattagttgataatttttggtttgatggatttatagtcatcttagattgtgacgttgacaccatcctgatatttattctgtggactctacagttacccgatctattctcagataggccattatttgtaccatgatgtcaattctgtgaatccaaaaaccaaaactggagaaattatgtagtgtgaaattgccactatgatacttccagctttttttccactatgttctagcaaaaacaagaacccataacctgtatttacatctttggcaagcaatcaactgagtagcaacatagacgtcatgattataagatgttattcattatgtgcgttaaatctgtatctgttctgatgtgtccttggatttaaactgcaacagggtgttaagttcatgaatataatttatcagttctccttggcaggaaaacctgcttcaattcattatggaacgggtgcaatttctggctattttagtcaggacagtgtgaaagttggtgatgtagctgtgaaaaatcaggtttatcatcagctgtaacttgctttcatcttatattcttatgtgcatccaattcgagaatatcctgattttattgggtaacactgctaggattttattgaagctacgcgggagccaagtattacattcatggttgcaaagttcgatggcattcttgggcttggatttaaggaaatctcggtaggaaatgcagtgcctatctggtgagcaagtcttgctagcatcttgaaaaaaataaatccattgcactcgtatggtaatagtagcatcaacaataaaaatgaacattttactctgtgtgtgacatgtataccttcattctgaacaattttttggaaggaaagagaaaactgagttttaagtgggaaccggcaaaccaacacctatacagatcaactatgttagactgacagactatcttactgtattatattgcaaaatgaagaccattttgtaccgggctacctgcatatttctctcatccttcgaatgtgaagcagatttcctgtcactgacattgcaaagcaaactcataggtacaacatggtgagacaaggtcttgttgttgatcctgttttctcattctggttcaaccggcatgctgatgaagggcagggaggcgaaattgtgtttggagggattgatcctaatcactacaagggaaatcatacatatgtccctgtcactaggaagggatactggcaggttgatctcattttgaagttggttgggtatgttttaaatttcaatattgatagcaatggtctgtgctgataaaattatcatttactttctgaagttcaatatgggcgatgtcctaattggagggaattccacaggtgctcaattatcaattttttttcatgctcactatacctttatttaaatgcaaaatggtctaatctttttctttttgaaaggaacatagtctaaatcattttggttgttccctatgtgtcattaggattctgtgcagctgggtgtgcagcaatagcagattctggaacttcactgcttactggtcccacggtatggtgtgaactcttctttttttataaaaaaaatgtccataagcaaggaaaagtggtctggattgcatctgatactggggttcctaacattggtttattgcctgaatctggatttcaatcgtgtgtgaaattcacatctgtaaatatttcttaacaatcatttaaaccactgtgcttttaacttaagttctacggcttctaccattagcacaaaatgttgcattttttgagtacaccgagtcattgaacatttttatagttctgtcagaaaagtttcgtttagattaaacatagagcatagatgcatgattttataattttgcaggtttccttttgatcaattaaggtaatcctacaattaaatgacaagcaccaaaccaactgaatggtattctacccttaaatggcacaaacaaatattccttgggccttgcttggcagggcccaaatcccagctcattcccagggacggtcaggaaagtcttaaagaatcactaacttcccaaaaggctgtataatttgttcccaatgtgtacattgcctattgaattagatagataaccatttaaagaacatcgcgtgtattatctagtgtcagaactttcttctgtggtgggtacattccttcttttaaaattagactttgtcttgatgaatcaatttggaactatgcaggccataattactcagataaatgaaaagattggtgctactggggtagtcagtcaagagtgcaaggcagttgtttctcaatatggtcaacagatcctagatcagctgcgagcagaggtttgcagttttctacattccaaaagcatgacgacatgaagttctcaaattcgtcactggtaactgaactttctctgggtttgtgatgcagacaaaaccagcgaaagtatgctcttcggtcggtttatgtacttttgatggtactcatggtgttaggtaagatttgtggatttgctgttttttagatattgggaactgtccagcctctacagttgtgggtttactgtggatggataattgaatgcgtagcattttactttgcaaattcctaatggtgtttacttgaatgcgagtgctgctattgtttgtgcttactaaatgtactagattattataagggatgaattgcattaaagtactgttgatttcattattcttgataactggagttgttacttatgatgactagttgtgctatgtaatggcagtgctggtattcggagtgtggtggatgatgaagttggaaaatcaagtggtccctttagcagtgcgatgtgcaatgcttgtgagacagctgttgtatggatgcatacccaacttgcacaaaatcaaactcaggatctcgtattgcagtacattgatcaggtttgtttcctagcttgtaagagcaacgctgcagtgcattattatacaaactgtgtgtaacttttccaaccttcacagctatgtgaccgtcttcctagtcctatgggagaatcatctgttgactgcagcagccttgcatccatgcctgacattgccttcacaatcggtggcaacaagtttgttctcaaaccagaacaagtacgtttcttctctatgactcttatgctgtcttttcttgggaattgcatccatattagctcttaagctcaggaattgttgtttgcatattttaagattgagatgtttttgcttaggaactttaactcaagatgtgatttctccattatcatcttgagttaaagtgatgcagccatatattagggaagagccccgtaggatgtattcccccaaaaaaagaaccccgtaggatgtttatttttctattttagaatatactccctccatccaaaagtctcatacatatttcttttgtcatcgagaccaaggagaaattaactcctccaatctatactctgcatgcaagtaatggggttggagaatggttgcttgggctccgagatatatgtttgatccagtgatgctaaacaaagagtcactctgttcattcaagccttagatgcatggagactacaaatacaaagcatctcatttggaaaaacaaaaaatgaaatacataagagacatttggatggagggagtagtccaatactccaatacaatgcttattggcactccttttttctttttttcaaattgttgcatgacaatcaaaatttaaaataacaacgttgaaaaaaattacagctagatataagaaatgagaaaatcagcacgccagaaatggtggcaaaaatgcttgtggaacttcctatagcttgagccttgaggaagaggtagataatattgtgtgtaaatggttctcatgcattcaaaattcatatattctgttttatcttccctattcagtacatcctgaaggttggtgagggaactgctacccagtgcatcagtggattcacagctatggacattcctcctcctcgtggtcctctctggtaaattatccacctctcagagcgtttttgcatttttcaccatcaatgaccctttttgtgtagcatgtactgctcaaacagaacaattgcataagtaatcgtctgtcctgcttgtgtcttagatacttgtcatccaacaaaagaagtgtattcaacattttcagagttcagactgtatgttgaaatgctcgagttttcttcttttatgatactactacttaacaatcttcgttgtgcttcacattacttaaaacaaatccccatagactgatagacatgttgcccttcactgaccacgggagcttgctgttgcaggatcttgggagatgtctttatgggagcctaccataccgtgtttgactatggcaacctgaaggttggcttcgcagaggcggcataatgccccccatggtgatcggacgagtcggagagcccttagcttttcagctcgggtttatctcccgcaagcgtgtaggtatatattttagtgcatgctcaataaatattgctactgtgatctcaaaacctgtctgttttaatttggctaagctaaatataagtaggcagaattcagacg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0663400, RefSeq:Os01g0663400