Os01g0663500

From RiceWiki
Revision as of 04:52, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0663500| Description = Transcriptional coactivator/pterin dehydratase family protein| Version = NM_001050322.1 GI:115439014 GeneID:4327862| ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0663500

Description

Transcriptional coactivator/pterin dehydratase family protein

Version

NM_001050322.1 GI:115439014 GeneID:4327862

Length

4844 bp

Definition

Oryza sativa Japonica Group Os01g0663500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:28851316..28856159

Sequence Coding Region

28851419..28851472,28851591..28851652,28852513..28852595,28854053..28854138,28854217..28854340
,28854966..28855034,28855785..28855879

Expression

GEO Profiles:Os01g0663500

Genome Context

<gbrowseImage1> name=NC_008394:28851316..28856159 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:28851316..28856159 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacccgcggcgtcgctatggcgcacgcgaggctcctcctggcgcgctactacgcgatggcggcccccagttggcctaccgtatccaagaaccttccgctgctgggccatggacgttctcatcatccgatgtatgcaagtcaagacgagattaaaatgtcaagtagaagatggtgccatggttctcctgacaatcaagagctggcaaagaagatttgtgttccatgcaattctaaggatatacatgccatgccagaagattctgctaagaagatgctagaacaggtgggtggttgggaattagcaaccgaaggtgacattctgaaattgcacagagcatggaaggtgaagaattttgtaaaagggcttgaattccttcagcttgttgctgctgttgctgaggaagaaggccaccaccctgatcttcatcttgtcggttggaacaatgtgaaaattgatgtttggactcactctgtcagaggcttaactgacaatgatttcatccttgctgcgaagatcaataacctcaacttagaaggcctcttaagcaagaaagctacagtccaaaagtag</cdnaseq>

Protein Sequence

<aaseq>MTRGVAMAHARLLLARYYAMAAPSWPTVSKNLPLLGHGRSHHPM YASQDEIKMSSRRWCHGSPDNQELAKKICVPCNSKDIHAMPEDSAKKMLEQVGGWELA TEGDILKLHRAWKVKNFVKGLEFLQLVAAVAEEEGHHPDLHLVGWNNVKIDVWTHSVR GLTDNDFILAAKINNLNLEGLLSKKATVQK</aaseq>

Gene Sequence

<dnaseqindica>104..157#276..337#1198..1280#2738..2823#2902..3025#3651..3719#4470..4564#acgccaggcaaacccacacgccgccttcccgccgcctccgctcttcttcccccaaccgcgtcgcaagcccacggcgagcgccgccgccgtcccaccgtcgccgatgacccgcggcgtcgctatggcgcacgcgaggctcctcctggcgcgctactacgtatgccaaacgcggggacgaagaactcaccgcccagccccccaccaacgccgtgtaagcataccgtcgaacacctcccgtgcgccactaacccgcctcttttctgttgcctgtgcaggcgatggcggcccccagttggcctaccgtatccaagaaccttccgctgctgggccatggacggtacgagtaacctctttcttgaatcgtgctcgaaattttataccgtgggtgggtttgtcggggtctggattgttgtacgtgctgttgtttttgaaaggggtgggagaggtggttatgcatgttaatctgtaattatatcgttaattgcagatcctttgggcacagatgatcactaattatctgttgcatgacagattaatatgctatgtggttcgattttagcatatgtttcagatcacttagtgttgtagtttcagaatcagagtatttctgcacatctttgcctaatatatactaccaataaggatgtatatgagaacaccataaaaaacttgaaagatgcacggaagtaaggatcaagtactgttgtttaacatgaaaaataagagttctctagcctgttaggtgtacggcgaattctattgttgctgtagcggtcatgcacttttaattttggtttggaagcattacaacatggttgatatgcttttggaaacagtttttttttttctgaaaggaagcttctgataaattttcgtggcattttggtacaagtatatgcaagcatatgcatttaataggaagacgattcctttgttcatttttataattggaacttgcaaaccttttgtccgggcaagtttcctgttgggaacagtcatagaggacacagtgtagaactccatttaaatcatggctaatgaccaaaaaacactcaaattctgggttcgatacaagttccgttgataaatgagatcgtatgacgtcttgtatgggcttatggcctttatgctatagtgagctttagctgatggtctcatggataactgagtggagaaataccattgtctatgatgcagttctcatcatccgatgtatgcaagtcaagacgagattaaaatgtcaagtagaagatggtgccatggttctcctgacaatcaaggtagtcttgtaagacaccagcctcctgaaagtttcttagaaatgtttgaggatattcatttgaactcatccggttcatctgtccatgtattagtgcacccacgtacaattcacacctagagtttcatctcaactggttgttttttaaatggaaactattacatgtttgaggcatggagtagtaatgcagctaacgtgcataaatggaaacatactattatcacaaaagtagggcatttttggaagattgcgtatccgttacatttcattctcactctgttcttcttctttgccttttcttgttaaactctgtactacctgtcattcactcattccatctacaaagcacaaactcttctacaatctacactagccattcgcccattcctgtctctggcatcacgcagccgaggagcttgacgaggtaggcggaaccggcggacaacggcgctgtgagttgcgccgcggcggaggagtcgagcccgagccctcgagcggtggcaccgcaccaggcagagaaagatcgtctgagccgcgccgtcgtcgggatgtcgtcgtctacggctgcgatcggcgatccaggtcatctttcgaccgcctttaattgttcccccccccctcccccccgtcctctaatctcttcccgtcgcaccatgcgtacgggtcgtcgtcgcgcaccagaccgcggccatgtgtccatggtgtccttctcctcccctcctgcttgagttgtcatcggcggcgctctaatgtcttgcttgatgccgtggccgtgggtgctctgtcaacaccatcttgctgcaatcgtatgaatcgtctgcccatacccgtagttggggtgaaagaaggccaggaggaaaaaacttctctcatttaaacggacaccggcagatttggtgaatggaaaacgtgatgtcgattctattctccagaatttatgcgtttgcagtaatactttacattcgacctttctgttgatattttgcaaaactttgctacgggtgcaatggcatgagccaatcttttaaaattttagctgggtattcaaatatatgaacatgttgttcttatttgattttttttataatgtaaaagaaatggacagcaacaggtagaaagaaagcaatccacctaagtaagaaggataaaaagaactaggaataaccaaataaaggatatcttaaccatgtagtcactagtcaggattcaggaacccctggtttgctcctctagctttttgaatgatattcagaatactattcttatcatcttatttgagggaatagtgatgtcttgatagcatgcagtacaggagctgtgatactcccatcaccatattgtggttctccagtagcaatatcgatccccattcttctgttcttgactttctcttgccttgttaatccatactgtcatttactgtataatctcacagatctgcttctcctattatttcagagctggcaaagaagatttgtgttccatgcaattctaaggatatacatgccatgccagaagattctgctaagaagatgctagaacaggttttattcttgtatgattttgtagtcaagagtctgattaaggttattggcacttcatcaactgactcttgaaaacaggtgggtggttgggaattagcaaccgaaggtgacattctgaaattgcacagagcatggaaggtgaagaattttgtaaaagggcttgaattccttcagcttgttgctgctgttgctgaggaagaaggtttcctgttcttttgtttctttttatacatactggcataatctatatggtctatttccaccacatgtttccttagttaaattaagtcagcaatgattagctaacttctcttacagtactagttgatttggaggttcacagttttacatacctcttttgagacaccaaacgtaccataaaaaggttaaacaatatgatgcagagcaagtgttccaagtggagctactgcaagctagtactatttcatatgcagtacttcgtggctgcatgtaattctacgcttattgtctggatgagataagatagagaggagagctagtaagctagctcctgttgaacttgggaaaatatcttataattgttatggctattgatgaagaatagaaagattgcattacatttgatatagtgtagtcatggtgatcagaatcaaattattagttttctcacatttttctacctatgcattacatttgttgtcatagcatgctacaattatatttagtatgctgggagtttatttacatgttgcatgaaaaacacttctaaactgttcacattttttggatctcatttttgttttaaataacagtgccagtgaagtatgtttgatgtcctttcgcaggccaccaccctgatcttcatcttgtcggttggaacaatgtgaaaattgatgtttggactcactctgtcagtaagtgatttgcatatcattcgttttgccaatttgttttgatgtgatcatttaaaagaatcaaacctcatatctctcagtattttggtttgttctttagtcaaagttccttccaaacctgaaaacacttgactcattacatttagcagtgaatgttgaagccaatgctgctgaatgaaataaagggatcactgttgttcctgtttaactttgtttaaccttttcaatctctaggactgaaaggtcaaaatggctctttcctaaaccttaatgaatgatggctattagtcaatacactattttaggaactctgattgacttgactaagttttcactttgcaagaaaaacaagatggccataatggcataatttatgctctttatttggacaatatcaaaattcagatgtttatttgagaaattcttgccctctattagttgaaacctaaccgaatttctatggattatggaaaaaaggttacatgcttggagccttggatgtttagtctgttggtgatttgccttttccatgtaaaatatttgtatgcttaaaaggagataagtcaagaaatagggaccagacatagcaactgtagctgaaggcacataatcacagtatttggttgttgagaattgggttaggatttaggaagccgtactgaagcaacataagcacagtaacagaacagaaatcaccatcagtccatcactctagtttataatgatgtgattccactgctatggttgcaggaggcttaactgacaatgatttcatccttgctgcgaagatcaataacctcaacttagaaggcctcttaagcaagaaagctacagtccaaaagtagttcgcgcagatgaagcgattgatttctgacgagatttatgtacttgcttcggttagaatgcgtgagttgaggtatctttaacttgataagcttttcttgaatttgtaccgggagtttctctgttctttctaaattttaccaatgctgttggaccgggtctacttctgttacagaatgtcgagaaccaccataatctagatttgatcaaggagaacctgtttctcttacatgtgggccaagagatgtagggtccacgaacattttagagtccaccacacct</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0663500, RefSeq:Os01g0663500