Os01g0664100

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Revision as of 04:52, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0664100| Description = Conserved hypothetical protein| Version = NM_001050325.1 GI:115439020 GeneID:4327867| Length = 5874 bp| Definition ...")
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Gene Name

Os01g0664100

Description

Conserved hypothetical protein

Version

NM_001050325.1 GI:115439020 GeneID:4327867

Length

5874 bp

Definition

Oryza sativa Japonica Group Os01g0664100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:28879334..28885207

Sequence Coding Region

28880527..28881207,28882370..28882558,28882656..28882747,28883714..28883773,28883911..28883980
,28884267..28884470,28884546..28884926

Expression

GEO Profiles:Os01g0664100

Genome Context

<gbrowseImage1> name=NC_008394:28879334..28885207 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:28879334..28885207 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctgatgtggagggccaacagcctcatcaggtcagtggtgtgtccagggcacaagacggggttgccaaggtgagtttggggaaagagcatgtgccaggaagcgagctctggaccgacgggctcatctgtgcttttgagctcataaagggtcacaagaagctggttcagcacaaatcatggccgacgattgatagcatgcaggagaaagaggtccctatgcatatgaagcggcacataagtaggaacgggcatcatgtcgcaaccatgaaaccagaagagtgcgatgtggtggagaatccccgccagacagagtttgctaatgatccttctctgttcaaagataggccggtgcatgtcagggcaatcctggatcacaaatgggtgcctatcggatggtctaggattgctgaactggtccagagggttcagtcagatgccagctgggatagtgagccggcggagatgaccgacagtgaggatgattacactgtagctgatgttgcagctccatactggcagcgtccggtaggacctacatggtggtgccatgtcactgcaggccatccctcagttgacgcatggctgaatagtgctcactggatgcatccggctataagaactgcattgagagatgaaagccggctgataagtgatcggatgaagtaccttctctatgaggtcccagttagagttgctgggggactgctatttgaacttcttggtcaatcagtcggagatccaaaccgtgaagaggaagacatacccattgtgcttcggtcttggcaagcacagaactttcttgtgaccgcaatgcatgtcaaaggcccttcatccaatataaatgttttaggagtgactgaagtgcaggagttgcttagtgctggtggaagtcaaacacctagatcagctcatgaagtaattgcacatttgatcggccgtctttcccgatgggatgacaggttattccggaaatatgtctttggtgaagcagatgaaattgaactgaagtttgtgaataggagaaatcatgaagatctaaatctagtcagcatcatattgaatcaagaaatcagaaggttagcaacacaggtaatcagagttaaatggtctctgcatgcaagggaagagatcataattgagctccttagacatttgaggggaaataccacaagagttatcttagatagcattagaaaggacacaagagaaatgttggaggagcaggaagctgtccgtggccgcttgttcactattcaggatgttatgcaaagcactgttcgagcatggttacaagatagaagccttcgtatcacccacaatttggctatttttgggggtggcggcatggttttatccataatcactggcctttttggaatcaatgttgatggcataccgggagcgcagaatactccatacgcttttggcttgtttgcaggacttctcttctttgtaggcttcgtccttattggggtaggaatactctatcttgggttacaaaatccagtgaccaatgagaaggtcaaggtgaggaagctcgagctccaggatcttgtttcagcgttccagcatgaagcagaacagcacggcaaggtgagggaaggtctcagccggcacagctcgtctcctaagtcatcatcggcctctaatgtagactacgttctaatttcttaa</cdnaseq>

Protein Sequence

<aaseq>MADVEGQQPHQVSGVSRAQDGVAKVSLGKEHVPGSELWTDGLIC AFELIKGHKKLVQHKSWPTIDSMQEKEVPMHMKRHISRNGHHVATMKPEECDVVENPR QTEFANDPSLFKDRPVHVRAILDHKWVPIGWSRIAELVQRVQSDASWDSEPAEMTDSE DDYTVADVAAPYWQRPVGPTWWCHVTAGHPSVDAWLNSAHWMHPAIRTALRDESRLIS DRMKYLLYEVPVRVAGGLLFELLGQSVGDPNREEEDIPIVLRSWQAQNFLVTAMHVKG PSSNINVLGVTEVQELLSAGGSQTPRSAHEVIAHLIGRLSRWDDRLFRKYVFGEADEI ELKFVNRRNHEDLNLVSIILNQEIRRLATQVIRVKWSLHAREEIIIELLRHLRGNTTR VILDSIRKDTREMLEEQEAVRGRLFTIQDVMQSTVRAWLQDRSLRITHNLAIFGGGGM VLSIITGLFGINVDGIPGAQNTPYAFGLFAGLLFFVGFVLIGVGILYLGLQNPVTNEK VKVRKLELQDLVSAFQHEAEQHGKVREGLSRHSSSPKSSSASNVDYVLIS</aaseq>

Gene Sequence

<dnaseqindica>1194..1874#3037..3225#3323..3414#4381..4440#4578..4647#4934..5137#5213..5593#gcatttgcctttgcatccccttcccttcccgtcttgaagcgcccgctccgctcccccacgattcctccttcctccacacttccacagtctccggcgcgctcccctcgcccactcttcttctctttctccctctcttcctcctccacctccagggctccaggctaaaacgtcttccccgcgggagtgctaggttggctctgcgcgtggggcccgcggggaaagctcagtggcgcgcggcgggtttttggcgggagcgggacttggtggccggtggcggcgctgcctgcgggtgtcgtgccgcgatctgggctccggacacggtgtggcttttgccctaccttttccaattcccaaatgcttgtgttgtagtacttgtatacttgcatccggacttgtagcagtagtagtttctagtttgtacttgtatactgggaaagtgatttcatcccctcgtttcatacatgtcatgtcacctaaatagtcatcacaaatttgaaaagatttggcaacatagattaatatgaaatatatcactccacaaacatgcaagtttaaattcaaattctacaagttgtaacaaaaataacaaatatagctgcgaatgtacaataactattttcagtttaatttgttcttttgttgcaacttgtagaagttgaatttggtcttgcatgtttgtggagtgatacattttatattaatctatgttgtcattttttttcaatttttttgataactatctagatgacatgcaaacaacgaggggatgtccccttgagggatgaaaatccacatcctccgcctcgtcgctatgattctcgtgttcccctatggtacaactgtggtgtaatgctccagtaattagtaatccctccgtcccaaaatataggagcctagtatactgaattacacacatccgcggttcgcctgttcatatttgtagtactgggtgtgtctaattcagtattgggttgctatattttgggatggggaagtagtgttattatactgcatcattttctcatgcagcaagtatatttgttaaaccatcccaatgggagttgtttgatcttttggcccaatttctcaactgattgctctatacactttaattgtactagaaatcagtatttacatgacataatttcctgatgaatgtgcatctctctccaacatacagaattggagcggacatggctgatgtggagggccaacagcctcatcaggtcagtggtgtgtccagggcacaagacggggttgccaaggtgagtttggggaaagagcatgtgccaggaagcgagctctggaccgacgggctcatctgtgcttttgagctcataaagggtcacaagaagctggttcagcacaaatcatggccgacgattgatagcatgcaggagaaagaggtccctatgcatatgaagcggcacataagtaggaacgggcatcatgtcgcaaccatgaaaccagaagagtgcgatgtggtggagaatccccgccagacagagtttgctaatgatccttctctgttcaaagataggccggtgcatgtcagggcaatcctggatcacaaatgggtgcctatcggatggtctaggattgctgaactggtccagagggttcagtcagatgccagctgggatagtgagccggcggagatgaccgacagtgaggatgattacactgtagctgatgttgcagctccatactggcagcgtccggtaggacctacatggtggtgccatgtcactgcaggccatccctcagttgacgcatggctgaatagtgctcactggatgcatccggctataagaactgcattgagagatgaaagccggctgataagtgatcggatgaagtaccttctctatgaggttgtctttcttattctcatttttccgagacatttcataattttatatacttatttttcttccttcaatctgtccgttattcaagaccttttttaatcattctacaattgaatgctctgcaatctgcgcggtgtacacattatctgcctgaacttctaaacttgctgtagcctgtactgttttttctattctataccttttcatgtttcgtgaaaaaaaaggaccaactcctgagctgttgtaggtttttttttctatgatcatggttaactgtgaagacctttagttttagaatgaatatttgtgattttgttcaagagcacacaccgacctttccacaatattctgaagacctctttctatgtggaatcatttcattgcttcaggctattgtatgaaatactactatcaatttatcatcattccctctaacccaccctcttttccttgaaagcattaacataacaataacattatggcctaactgggtgggtcaagtattatgggtctggaccaggctcatgcgttagtttaggcatgataaattaggaataagtcaaataaagataggaggatatctaattaggaaagagatgagatttgttagtaaaatagagatagagattggattggttcctataatgttggcccatgtccataacatcgagactggcttgacccattgatttgtcataaaacttttggacttatcttagatctgtcaaagtcacctgcattatgtacaggtattttcatggattttctttacttaatgggttctatacttctattgaactgttttttttctatattcatataatattgccaaagtagtctatcatggagtcgatgcatatatggttatgataactgtgccctgtcaacctgaatagtaggcagcaatatttactgtttggtcaaatcattcagcactgtttttctctctaagagttctatggtcttattatgtgcaaatcagtaatttctcaaactatgctgatttggtctgcttccagaacagctaaacagcctgactacttcatagaactactcatgtgcattttagatgcataaaatagtttaatgtctattagaaagtgtgatgatgctctatcagatgtgcacatcagatttattctataaacttctgttagctattcaggtcccagttagagttgctgggggactgctatttgaacttcttggtcaatcagtcggagatccaaaccgtgaagaggaagacatacccattgtgcttcggtcttggcaagcacagaactttcttgtgaccgcaatgcatgtcaaaggcccttcatccaatataaatgttttaggagtgactgaagtgcaggtactccttttgaaacaaaggcttatttgctggtatgaactgaatagtatttagcttgtgaatttttcatcttaaatgcttgtggaactctgtgcaggagttgcttagtgctggtggaagtcaaacacctagatcagctcatgaagtaattgcacatttgatcggccgtctttcccgatgggatgacaggttcattctatgttccaacttctaccactaccatcattttcggtttattttcttaggatgtttggtcatagagataaaatatccatcaataagaaaaaaaaatcttcgtttgttctgtgtaatcatgacacttcttttttttacctcactcaaacttatcataaaaaaagtttctatatacatcaatagattgcacttatacaggtttgacccatcatactgctatttactttcttggatttaactttgaaaatgaaaccaaacacaatgaaattcaacccccaaaataagaacaccattggcctatattttaatactatgttggctataagcttataccttatattgccaaaagaaccacgacaaaattcaacacccccaaataagaatctcattggattttatcttaatactatattatactgttgattaacttatgctcaggcatgccaaaaggacccttggtgttctgtttatctgcataataaaaaaaatgatttgatatgaggactttcaactttcaagagcaatttgttctaactatgcattctctatattccattacctcctcaacattactgaacgtctactgtctagtttgtaaaagaagatgcatattatttgctttaggaagacaatttttgttcttgataatgataagattgagcataactagtggaaactagtatcctttttccaacaaataataacaaaggtaccaaaattcaagttgaagaggacttgaactacgatgggggcacaatttatactcaattttttttcttgattaagatgttattatagatttttatctagccatattaacttgcccacagcatttcttttatcaggaaacctaacattttaatccattttagtcattctttcttttatgcctgcaactgtacttgctgtagcaaacaatggtgtctactcatggctaatagttgtgttattttatttcaggttattccggaaatatgtctttggtgaagcagatgaaattgaactgaagtttgtgaataggtgaggaaactgaacaggcatatctcaactagcagagcatattatttgaattgatgggcctgtgccctaaaatgaggtgatttcataacattttaaattaccttacatattcaaagttccaaacaaccatttcgcaggagaaatcatgaagatctaaatctagtcagcatcatattgaatcaagaaatcagaaggttagcaacacaggtaagtatgccaccctaatttgccttctatatataattacctcattgaaaaataaaacaccaatttattagattggccaatgtgtcgtttctacttgttgaagtataatgcacaaaaatttagatagggtagatccaaaataggaattgaattacatgtaggaacttctattcagataagtgtgcaattgtgaacagaatagtgttagcacattcaagttccacgtggcaattgtgcatgccattctctttttttgatacataatgatcatgagcccgtgctacaggtaatcagagttaaatggtctctgcatgcaagggaagagatcataattgagctccttagacatttgaggggaaataccacaagagttatcttagatagcattagaaaggacacaagagaaatgttggaggagcaggaagctgtccgtggccgcttgttcactattcaggatgttatgcaaagcactgttcgagcatggttacaagtatgcaccgagctatttttcattcttactgttgacttgacttgtaattgatagccaggttttgctcttctccaggatagaagccttcgtatcacccacaatttggctatttttgggggtggcggcatggttttatccataatcactggcctttttggaatcaatgttgatggcataccgggagcgcagaatactccatacgcttttggcttgtttgcaggacttctcttctttgtaggcttcgtccttattggggtaggaatactctatcttgggttacaaaatccagtgaccaatgagaaggtcaaggtgaggaagctcgagctccaggatcttgtttcagcgttccagcatgaagcagaacagcacggcaaggtgagggaaggtctcagccggcacagctcgtctcctaagtcatcatcggcctctaatgtagactacgttctaatttcttaaggctgtgaaattaatccccttgtgggagggattcactgaacaaggcctaaaagggattggaaaaagaataaagtacaaagagatttgacagaaaaaaaaaaggatttccggatagaagagttcttggtaaggactaaagtataagccatataagtatataactatgtttggtgatctgtatagaggtttagattagagtataatggttaacttgatatgctacggatatacttgtgactgggaaggattatcactgaggaaaatgtgatcgaaatgctaat</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0664100, RefSeq:Os01g0664100