Os01g0664500

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Revision as of 04:52, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0664500| Description = Lg106-like family protein| Version = NM_001050328.1 GI:115439026 GeneID:4326851| Length = 3934 bp| Definition = Ory...")
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Gene Name

Os01g0664500

Description

Lg106-like family protein

Version

NM_001050328.1 GI:115439026 GeneID:4326851

Length

3934 bp

Definition

Oryza sativa Japonica Group Os01g0664500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:28900914..28904847

Sequence Coding Region

28902728..28902853,28903457..28903519,28903658..28903705,28903812..28903868,28904318..28904375
,28904469..28904545

Expression

GEO Profiles:Os01g0664500

Genome Context

<gbrowseImage1> name=NC_008394:28900914..28904847 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:28900914..28904847 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtctggaatgccatctgatgaggcaactggtcaagtgaggctcgaaggagatgtttctgacaaaaaggaagaaaaaactcaagagcagagcgaagcaagtggaatgccctcaccacaagaagaggaagcagccatcaagaaaaaatatggtggaatactgcccaagaggacgccacatataactaaggatcatgatcgggcttactttgattctgctgattgggctctaggcaagcaaggtggaagccacaaacctaaagggcctcttgaagcacttcgaccaaaacttcagcctactcaacaacatgcacgtgctcggcggactccctatgcatctgctgacaatgatgagtgtatgaatttgcctcctgaggatttgatccagaatggtgatcccatcgaagacaagaacaaggaagaacagtaa</cdnaseq>

Protein Sequence

<aaseq>MSGMPSDEATGQVRLEGDVSDKKEEKTQEQSEASGMPSPQEEEA AIKKKYGGILPKRTPHITKDHDRAYFDSADWALGKQGGSHKPKGPLEALRPKLQPTQQ HARARRTPYASADNDECMNLPPEDLIQNGDPIEDKNKEEQ</aaseq>

Gene Sequence

<dnaseqindica>1815..1940#2544..2606#2745..2792#2899..2955#3405..3462#3556..3632#cgtcgatctcacgctaccctcgatcgagctctctctgcggcaaacccctccctccttcccacccaagggggaaagctccgccgccatcgtcgtgctgctccccgttcccgcggatccatccggggctctgggttgatctacctcgccggtgacgtacccttatccttagcctacactgctttgcttgttccgagattttatcatactgttaaacttttgttttcttacacaaatcctttgtctgggaaatgtaaccaaccaatgaatggaatccccaatctgtgcagtttcctgctgtttcctgctgattcatttgctgttttggtagtgtgcttatatttcatcaaaaaaaaaattctagaattttgcgggtgttcaactgaatcccatgccccttgttaggtcctctcctgatctgatctgggagaacacttcggattgcaattccctttacaaccaatggcatgtctgaagtgggacaacatttcttttctttattttttttaagaaaaaaaaagtggaaccatatcaattgttcactatcaatgcagtgataatggtgaagcaaggcatggaatgattaatttgaactattagatggatcttggactgctaacactgacgtaattaaaatcagaaatgaagttaggaaggtcagctgtttttttccttacctgactagctgacatttccatgattgcagtcatgacaccatcagttttgcacgctgtcagtaattctagaacaaaactgggctgaatggctgatgacctatatatgagtccgtttgctgaccagttcttgatgtattgcacttgacaataaattcatctgctgacccattcaagttgtattgcacttgacaacaaacaaatttaaaacaaaggttgatgcctttttggtagagaaattgactgaatactgatgtggttagtgcttctttgctcatgtcatgttctgaattgaggtctaggtgagtgcatcttttcaagccacttttgactaaatatgcattgcttgcatcatttgtcatgtgcagttgaaattcctgcagacataggatagcagctgtatgaaaacatatatattctctagactgttatttagatttgtacagcctagattatatatatatttttaaatgcttgtgccttttgtcaagaaaaaggcccaaatagactagtatcgaatctagttgttggaaatatttgaaggttgaactgcaatctgtgccaagcatgtctgtcctccatcctcattcaattgtgctcatacatggtattttgcaagatcattgtgctttataaaggcgtgtacttgtttggaaattcggtattaataatgggaacggtattgtttttatcatagactaatcagaataatatgaactcttcttgagctgaaaataaacatgcaatgtatgcatcccctgtttcctcttttcctctgattgaatgcttaacaagcttacagtgacaaacagtgagtcggcataaattttggtacagttgagaagttcttgtgttggacatatccctcctcccctagaaataagaagctggtattagtctccttatttattttatgtacttctgctttcttctattgcataaaggaagggaacaataaacatctgccttttattctgtttctttttctgagaaacttttaccaccctcatgggccatcaaatacattatcttccttttttgtgtatgttagatggttagcgcatactgtgtgctattaaatgattctttgcaccatgagcgtggacactgaaattgaagtcttctctgcagcttaagttcactatgtctggaatgccatctgatgaggcaactggtcaagtgaggctcgaaggagatgtttctgacaaaaaggaagaaaaaactcaagagcagagcgaagcaagtggaatgccctcaccacaagaagaggtactatcttcatataagtccattcttgacccttgaactttatccagattctatttttcaccgtaaattcgtaaaccgtttattttcatcctgaacttctcaaattgttcactttacccccttgtgacgtttcctccttgcttcagtacatagtagtcaaggccacgttggctttgacctttgctgatgtggctgttggcttttggatgacgctggaaggcctctaaccattataagccatgttgtgagaccaaaaatcggttggaaatgatgcaacaccttatatagaggtgcaagccttctggtgttgtccacaatcaacagacacatcagcaaggttaaatccaacatgggctgtccactgtgtaccaaaactgggtggaaatgattcaagggaatagagtgaacagtttgagaaatttagggtggaaaatacccgattacaagttcagggtgaaaaatggagtcaggcaaagtgaaaaggatcttttgctacaccatttttcatgttactgtgtgtacttattcatgtggcatttattccataaatagtatgaatatctattaattagattactaatatttatatgcgaatatgttcaggaagcagccatcaagaaaaaatatggtggaatactgcccaagaggacgccacatataactaaggtcaatgccttctttattttagtatatttgtttttctctgttaaaatgatgattattgtataaaggtgaaacagatgtatggttaagttgcatttcttactgagcttatgtaatacttaaactggaataatctatcaggatcatgatcgggcttactttgattctgctgattgggctctaggcaaggtaatactaaagtcattatgaagttgaattgagtgctgcattaatattcaataattttcgaagaagaattcaattcttaccatgtttttccttttgcttgccgcagcaaggtggaagccacaaacctaaagggcctcttgaagcacttcgaccaaaacttcaggtactgacatttcagcacacaagatgcacaatttttttttttttgccatgtttttgtttcgctggaagattatggctgaatttaggggcggaattaggagtagggcaggtggggctagtgccctactcctgagtccttaacctaaacacccattgagataacacttcaaaatttaaaaattagaagaaaaaaaaggcaaattacactaattcagccctagtcttgaaaaaagtttggttcccgctcctggctgaaagtgaatacccagatcatttgcttttagcatgttgcttctgatatgctctcccctacatgttttgctatcaagactgacaacatttcttttatcactctgaacaagtatatgagaagtcatattgcattctatgtcatgctactatattcatttctttccttcggtgttttactgtgtcccaatccactttcagcctactcaacaacatgcacgtgctcggcggactccctatgcatctgctgacaatgatggtacttcttgtctgtacatgaatgcatctcaactccgtgtacgtgcatttcattttcttatgttgtatgatggcattgtttattgtcctgtagagtgtatgaatttgcctcctgaggatttgatccagaatggtgatcccatcgaagacaagaacaaggaagaacagtaacgagtagctgcaccctgtctatttggagcgttgccaatcctgtcctcgagccaaactgttgccttggtaaataactagagccaatgcctacacttgtggggttgagctctgcagtgtttaacttaaacgtaagacgtggtatgtctggcgtctaccacattcagctgttcagtgtctttctggcatctgtaacagctaggaatgaaaacttacatatgatgctgtgataccgatgctgtagtacctgatgtgcaaagaaacaaataatgcttcaaattcagctccccatgaatggaaattag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0664500, RefSeq:Os01g0664500