Os01g0666000

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Revision as of 04:52, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0666000| Description = Similar to Lipid phosphate phosphatase 2 (EC 3.1.3.-) (AtLPP2) (Phosphatidic acid phosphatase 2) (AtPAP2) (Prenyl diph...")
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Gene Name

Os01g0666000

Description

Similar to Lipid phosphate phosphatase 2 (EC 3.1.3.-) (AtLPP2) (Phosphatidic acid phosphatase 2) (AtPAP2) (Prenyl diphosphate phosphatase)

Version

NM_001050333.1 GI:115439036 GeneID:4326857

Length

4118 bp

Definition

Oryza sativa Japonica Group Os01g0666000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:28982021..28986138

Sequence Coding Region

28982406..28982518,28984412..28984471,28984597..28984785,28985012..28985105,28985235..28985344
,28985437..28985524,28985634..28985867

Expression

GEO Profiles:Os01g0666000

Genome Context

<gbrowseImage1> name=NC_008394:28982021..28986138 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:28982021..28986138 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccggccgacgcgcgagctgctccgccgtcgtgcccgttcccgacgatacggtcgcatggcgccgccgtggcgaggtcgcacgcctacgactggctcgcgctgctcctcctcgtcgccgtcgacggcctcctcaacgccatcgagccgttccaccggttcgtcggcgccggcatgatgaccgatctcagataccccatgaagcgcaacaccgtccccatctgggccgtcccgatcgtcgctgtcattgggcccatgattgtcttcaccgtcgtctacttcaggaggaggaacgtgtacgatcttcaccatgctgtgctaggcattctgttttcggtgctgattaccggcgtgctcaccgacgcgatcaaggatgccgtcggccgcccgaggccgaacttcttctggcgctgcttccccgacggaatcgcggtgttcgataacgtcaccacgggagtcatctgccacggcgacgcgagcgtgatcaaggagggacacaagagcttcccgagcggccacacttcatggtctttcgccggtctggggttcctgtcgtggtaccttgccgggaagatcacggtgttcgaccggcgcgggcacgtcgccaagctgtgcgtcgtcctcgcgcctctgctcgttgcggcgatggtcgccatctcgagggtggacgactactggcaccattggcaagacgtctgcacgggaggcgtccttggattggtggttgcctctgtctgctatcttcagttcttcccggctccttcagatgagaaagggttctggcctcacgcgcactttaggtacatcaccgagaggggaagcgagaacccaacgcagcaagccaccgaaccactggacgccatggaaaccggtaggggaggccaatga</cdnaseq>

Protein Sequence

<aaseq>MPADARAAPPSCPFPTIRSHGAAVARSHAYDWLALLLLVAVDGL LNAIEPFHRFVGAGMMTDLRYPMKRNTVPIWAVPIVAVIGPMIVFTVVYFRRRNVYDL HHAVLGILFSVLITGVLTDAIKDAVGRPRPNFFWRCFPDGIAVFDNVTTGVICHGDAS VIKEGHKSFPSGHTSWSFAGLGFLSWYLAGKITVFDRRGHVAKLCVVLAPLLVAAMVA ISRVDDYWHHWQDVCTGGVLGLVVASVCYLQFFPAPSDEKGFWPHAHFRYITERGSEN PTQQATEPLDAMETGRGGQ</aaseq>

Gene Sequence

<dnaseqindica>3621..3733#1668..1727#1354..1542#1034..1127#795..904#615..702#272..505#atgaatagagaggtgaaaactggagagaaactcccaagcaactcccaaagtctcaatctgctcaacggacatgttccaatgattcacttgttcgttattaattgttacattttctttgtttatatatacgcacatgtaaggatgcaggaagacgatcgatcaaggttcacctcggaaaagaaaaaagaacagaaagaaagacgatctagagggagccaaagattgcaagatcgatcgcaaggtaacgtacacgtacaggtgagaggaatcgatgccggccgacgcgcgagctgctccgccgtcgtgcccgttcccgacgatacggtcgcatggcgccgccgtggcgaggtcgcacgcctacgactggctcgcgctgctcctcctcgtcgccgtcgacggcctcctcaacgccatcgagccgttccaccggttcgtcggcgccggcatgatgaccgatctcagataccccatgaagcgcaacaccgtccccatctgggccgtcccggtgcggcgcaattataattatctgcgatttttatgatccgtccctcgattaagtttcctctttaattacgtgatctaatcaggattatctctcgtcctaaatggcgcagatcgtcgctgtcattgggcccatgattgtcttcaccgtcgtctacttcaggaggaggaacgtgtacgatcttcaccatgctgtgctaggtacttaaatcttccaacgttgccctccattccattgcaacatctccttaatttctttgttgtgacgaacattttgatccatcgacgagcaggcattctgttttcggtgctgattaccggcgtgctcaccgacgcgatcaaggatgccgtcggccgcccgaggccgaacttcttctggcgctgcttccccgacggaatcgcggtataacagcaaatctcaacttaattagcccctcaaaacagtcaaacctctctggaatttacgccccaagaacgcctcgcttatcgagcgatacacacatgtgctgtgctgtgctgtgcctgtgcccaggtgttcgataacgtcaccacgggagtcatctgccacggcgacgcgagcgtgatcaaggagggacacaagagcttcccgagcggccacacttcatgtgagtcaagtctatatatctcactcccctcatcacataacaatagatcaagatcagccaactgaatgtctgatcattcttctatctagattgattgagtgaatgatataaacaagaacttactacagtgaaattccaatcactgaattcacggtatatatagtgagtttgtgacactgacagcagaaagccagaaatgatatgttctcgtgctctgtggctgcagggtctttcgccggtctggggttcctgtcgtggtaccttgccgggaagatcacggtgttcgaccggcgcgggcacgtcgccaagctgtgcgtcgtcctcgcgcctctgctcgttgcggcgatggtcgccatctcgagggtggacgactactggcaccattggcaagacgtctgcacgggaggcgtccttggtacgtactccactatataccactgacactgtacatgcttgatgaagttgcggttttatcagaatcgatattgtgagctatatatctcgttctctctgctgctaatggtcagtgctcgtctataggattggtggttgcctctgtctgctatcttcagttcttcccggctccttcagatgagaaaggtgtgttctgctttctcccttcgtttctctactttcttgagatggattacacagcataccgaccacggcgtccaacaaaggattaaaatcacggtggtgtaatcggattggttaccagttaccactcttgaaccaccaacggtatacgggggagccgtcaaagaagtttaaatttgaaattgaaatcatattaatggtatatccttagccacaattataataaagaaaaaaagtgcaaattgagaagtaggcaccttcaatagaaaaaccgaaaaggacagtccgctcgtcaccgtaattcaacacaagtcgagttatcgtgactagctgccacatgtggccgtccgcaccatagttcgagagaacatcaaggccaaatctgacttctcaaggcaaccggatctacatgagtctaagttgttagcctgctagatctgtctcagcccaaagggccacaatatttgagctaattctaaatattaaaaaaaaacttcaaagctagtaacttcttaaaggatcaaaaacagctaggtccaaacgggccaaaggtcaccagatccaacagcatcgagcttgagagctgttgcatccgagttcattagatgagaagtggaggaaagtaatggcagatgatatatgctaggaacgacatagtcatcctaaatctggtgacatttagttccgcctagcatgagaggaaggggagaatgtgccgcttaggaaaagtgtcacaaggaggtgtcagggagaggatggggcaaggaataggggctagcagcattggggaagcgaaggtagcatcgatgacagaaatagaaaggggagcatcacccaggagaggggtggagaagaagtgtgacaagtaaggaggatcaggaatctggcaacggcccgaatcaattggaaaagggattaaggacaattcactcatcgccacaattcaactcaagccaagttatagtgaccagttgcccgcactatagttcgagggagcaccaaggctagatctgatttctcaaggcaaccggatccacacaagcctagaccgctagattcgaccatctcaaaccggaggtctgctacatttgagcacattttaagcataaaaaatcaattccaaagctagtaacttcttgaaagaccaaagcagccagatccaaacatgcctgaagtcactagatctagctgcattgagctcgagagccattgcagaagagttcattggatgagaaaaggagtggaggcctaaactggcaggtgatgctaggagcatggtcctaaatttggtggcgtttagttcagcctgagtggaaggggagggggtgctacttaggaaaggtggcacatgaaggtaccagggagaggcctgggcaaggaagaagagcaatagtattgggggagtgaaggcaccggaaatagacagagaaaaaggagcatcaccaggagagaggtggagagagagtgtaactcgggggatcagaaagcaggtaacggccttaatcaagtgaaaaaggggattaaggtttcttggttatatagattttcgtaaaaatgagtagtctgttgacttagatacgacgtatgtctcgtggataattgtattttgatctacttatgaggtggtaatacttttcatatgcttaggcatatgaaaatgtatgcattagccatggaaaaatgtttgaagatttttaattaaaaaccgactactattggaaaataaacaacaagttaccactgataaccggtttttaaattaaaatgttggattcaagcttttatatggcaaccaaattgttattcgctacgtgagagaacgatattattttcttttctaggaataatatattcaaaaccttgcattaactagtggttgcaccacgccaatggcagggttctggcctcacgcgcactttaggtacatcaccgagaggggaagcgagaacccaacgcagcaagccaccgaaccactggacgccatggaaaccggtaggggaggccaatgaacaaggtgcaagcaagaccaatcttgtgtatataaggccataatgtacagctcctcctcaaggcacgggaggtaatcgtcgttagtttgtaaatactttggcgtgggccaatggtaccgactaacttgactactgacctgacgcaaataggtgttgtttgtacatactgtatgtattttcaacgaagtttgtacatatgtattggttttgcttacttatgtactcctatgtattttaaataattttagtgtctaaaattccgttcttctcccaagaatggcacggggtcagatcaagctctgtgttaaggcctgaactggcccatcctatttgggcttgaattcaagaaatcattgtgaaaagaaataagtctattttgtgtccc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0666000, RefSeq:Os01g0666000