Os10g0498600

From RiceWiki
Revision as of 08:43, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0498600| Description = Tetratricopeptide-like helical domain containing protein| Version = NM_001071504.1 GI:115482751 GeneID:4349020| Leng...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os10g0498600

Description

Tetratricopeptide-like helical domain containing protein

Version

NM_001071504.1 GI:115482751 GeneID:4349020

Length

2686 bp

Definition

Oryza sativa Japonica Group Os10g0498600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:19466902..19469587

Sequence Coding Region

19468300..19469586

Expression

GEO Profiles:Os10g0498600

Genome Context

<gbrowseImage1> name=NC_008403:19466902..19469587 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:19466902..19469587 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>acttgccaggctattgttaagagcactattggcattggtgttgatgaggaagacagaaaacgcacatgggttgccgatgctgaggaatgcaagaagcgtggttcaattgagacagcccgtgccatctatgcgcatgcactcagtgtcttcgtttccaagaagagtatttggctgaaagcggctcagcttgagaagagccatggaaccaaggagtctctttataatctcctcagaaaggctgttacctacaatccacgtgcagaagttttatggcttatgagtgcaaaggagaaatggctggctggagatgtcccggctgcccgagccattcttcaggaagcttatgcttctctccccaattcagaggagatctggctagctgccttcaagcttgagtttgagaacaatgaaccagagagagcaagaattcttttgtcaaaggccagggaaagaggaggcactgagagggtctggatgaaatctgcgattgttgaaagggagttagggaatgtagacgaagaaaggaagctgttggaggaaggtctgaagttattcccctcattcttcaagctgtggttaatgcttggacaaatggaagaccggcttggccatggatccaaggcaaaggaggtttacgagaatgcactgaagcactgcccgagttgcatccctctttggctctctctagctaatctagaggagaagataaatggcttgagcaagtcacgtgctgtcctcaccatggcaagaaagaagaacccagctacacctgaactctggcttgcagcagttagggctgaattgagacatgggaacaagaaggaagctgatgctctactagccaaggcattacaggaatgcccgacaagtggtattttgtgggctgcagctatagagatggtgccacgtccccagcgtaaagcaaagagctcagatgctataaaacgatgtgaccatgatccccatgtcattgcagctgtggccaaacttttctggcatgataggaaggttgataaagctagaagttggttgaatagagctgttactcttgctccagacattggagatttttgggccttgtactacaaatttgaactgcaacatggaaatgctgatacacaaaaggatgtcctacaaagatgtgttgcagcagaaccaaagcatggagagagatggcaagcaataacaaaggctgttgagaactcacatctgtcaattgaggcccttctgaagaaagctgtgttggctcttggccaggaagaaaatccaaatgctgcagatccctag</cdnaseq>

Protein Sequence

<aaseq>TCQAIVKSTIGIGVDEEDRKRTWVADAEECKKRGSIETARAIYA HALSVFVSKKSIWLKAAQLEKSHGTKESLYNLLRKAVTYNPRAEVLWLMSAKEKWLAG DVPAARAILQEAYASLPNSEEIWLAAFKLEFENNEPERARILLSKARERGGTERVWMK SAIVERELGNVDEERKLLEEGLKLFPSFFKLWLMLGQMEDRLGHGSKAKEVYENALKH CPSCIPLWLSLANLEEKINGLSKSRAVLTMARKKNPATPELWLAAVRAELRHGNKKEA DALLAKALQECPTSGILWAAAIEMVPRPQRKAKSSDAIKRCDHDPHVIAAVAKLFWHD RKVDKARSWLNRAVTLAPDIGDFWALYYKFELQHGNADTQKDVLQRCVAAEPKHGERW QAITKAVENSHLSIEALLKKAVLALGQEENPNAADP</aaseq>

Gene Sequence

<dnaseqindica>2..1288#gacttgccaggctattgttaagagcactattggcattggtgttgatgaggaagacagaaaacgcacatgggttgccgatgctgaggaatgcaagaagcgtggttcaattgagacagcccgtgccatctatgcgcatgcactcagtgtcttcgtttccaagaagagtatttggctgaaagcggctcagcttgagaagagccatggaaccaaggagtctctttataatctcctcagaaaggctgttacctacaatccacgtgcagaagttttatggcttatgagtgcaaaggagaaatggctggctggagatgtcccggctgcccgagccattcttcaggaagcttatgcttctctccccaattcagaggagatctggctagctgccttcaagcttgagtttgagaacaatgaaccagagagagcaagaattcttttgtcaaaggccagggaaagaggaggcactgagagggtctggatgaaatctgcgattgttgaaagggagttagggaatgtagacgaagaaaggaagctgttggaggaaggtctgaagttattcccctcattcttcaagctgtggttaatgcttggacaaatggaagaccggcttggccatggatccaaggcaaaggaggtttacgagaatgcactgaagcactgcccgagttgcatccctctttggctctctctagctaatctagaggagaagataaatggcttgagcaagtcacgtgctgtcctcaccatggcaagaaagaagaacccagctacacctgaactctggcttgcagcagttagggctgaattgagacatgggaacaagaaggaagctgatgctctactagccaaggcattacaggaatgcccgacaagtggtattttgtgggctgcagctatagagatggtgccacgtccccagcgtaaagcaaagagctcagatgctataaaacgatgtgaccatgatccccatgtcattgcagctgtggccaaacttttctggcatgataggaaggttgataaagctagaagttggttgaatagagctgttactcttgctccagacattggagatttttgggccttgtactacaaatttgaactgcaacatggaaatgctgatacacaaaaggatgtcctacaaagatgtgttgcagcagaaccaaagcatggagagagatggcaagcaataacaaaggctgttgagaactcacatctgtcaattgaggcccttctgaagaaagctgtgttggctcttggccaggaagaaaatccaaatgctgcagatccctagtttgtctcacttttaacttttgataaggtattgcaatctgttatcattatactcttctgataaagaactttgctattgtgttcccgtatttccatgctttatgatgtctcatattgaaatgcttttcagtgtctattctattggtcagctataagatcttaatatttgagtatcatgtaataaatattgcgaagagttcttaatatttgagttgcaattaatttgtttgagacaagcagcattatcatttattttgttggttatcattaagtaaaccttagcttaaatctactaggtgcatgggtagtctaaaaatatgagttctgtatgtaaactatgcagaatctgttcatgctgtattaatctgctgtgcacatatgcccagttatctatgacatataaattataatcatgttgatgctgtcatggccttaagattgaaagaatatacttgttgccttcagcttgatttatgttttggttgaagaattggtgttgttttactccttgattgactgtatcaccttgactgaagtatttggggaatgtggcaattctatgttgaagtgtgtcaatgctaacattgattactgagttgcaagctgactttctgctccaaccaactcttgtgaatgtgcatttttttgccacaatagcggtcagactatttaattctgctaagcaaccctattctatcctctcctgattccaactgtagagcaatagaagatcgataaaatgtctatgcggatcaaaacaccacctttggaagcataatttttctttttcttaccagtaattttgtgtttctgtaacaaaacaagtaaataacatatgttactgctcgtctactgattcacgggtatcttttttagtttcctatgtgcttggattataattgtcttcttggatatccccagactaaagttttctttcaactcctcagtctggtcacaggtctaattcttctgcgcatgctggcaatggaatatatagagaaagaaacacagttgggtagtgaactgggatggactcgagctgcgacctcgtgattctgtgtaccaccgaactgattgctgcactcctccaaccatgaagccttacctgaagaagaatcaggcatgcgattactacaatttgtatcggcgatcaccagttaaaacctgtatcgtttgtatgccctaattgccagcaatacttctgtactaccatgagcatgtttattcctccagatgcataccacaaattcttagatgggtgtatttgctagccgcgacttgggatgatgtaatttttcttgggttcggtttattctcagagcactggcgtctgtatctacgactgtaagatctgcctgaatgtcggcttaatatatgagataatgccccatttttcagc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0498600, RefSeq:Os10g0498600