Os01g0673800

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Revision as of 04:53, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0673800| Description = Conserved hypothetical protein| Version = NM_001050370.1 GI:115439110 GeneID:4325906| Length = 4367 bp| Definition ...")
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Gene Name

Os01g0673800

Description

Conserved hypothetical protein

Version

NM_001050370.1 GI:115439110 GeneID:4325906

Length

4367 bp

Definition

Oryza sativa Japonica Group Os01g0673800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:29433040..29437406

Sequence Coding Region

29435039..29435095,29435536..29435617,29435833..29435924,29436079..29436165,29436322..29436420
,29436515..29436614,29436701..29436759,29436949..29437308

Expression

GEO Profiles:Os01g0673800

Genome Context

<gbrowseImage1> name=NC_008394:29433040..29437406 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:29433040..29437406 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgctgcccgccctcgccgccggccgcgccgcctccgtgcggccgccgcgcgcctcggcggcctcgggggaggcggctgctgctgcggcggcggatcagccggcggggcggaggccggtgaaggtgatactgccgaagaagaagccgcagaagtggtcgacggggatggcgcccggggagtacggcggcgggccggcgacgcccaagccgcgcaagtactggatggggaaggaggaccgcgaccccgtgggcaacaccgacgacttcatctggaacaaggacttcctcccacacatggagcgcgtcatcgccaacggcggcgcagacacgccccccaccatcacccgcctcaccccggtggatgaggactcggaatcagggttcctaagcatcaaccgcgcaatgagcctcgacagtgtggatgttgatctgagcaaggagcttcaggcgccaaccaggccaatcttgaaaacccaggttgaggctgcctggagggggcgggccattggagctgaggctgtcaacggtgttgcgtctcctagatggaggctagttccgactcgccgggaacaagcaaagtgggaccgagcagctaaggcagcaactggtggcagtgatgtcatactaagggaatcaaagtcaagagggcagcaaggagaccctgaggtattggcagctaaatcaagggagcaatatctagagttgaaacaaagattgcagttgtttactttaggcattggtggcattggtttggtctccgcctatttttcctactctcctgagattgctgcaagggctgattggatctgtcctgtatctccgcatgcttgggaccagtgtggattccttagctggtggaactggagaaactgtgaagagtgctgctgcccaaccaagactgcttattccagtggcacttgtgatgatgtataa</cdnaseq>

Protein Sequence

<aaseq>MSLPALAAGRAASVRPPRASAASGEAAAAAAADQPAGRRPVKVI LPKKKPQKWSTGMAPGEYGGGPATPKPRKYWMGKEDRDPVGNTDDFIWNKDFLPHMER VIANGGADTPPTITRLTPVDEDSESGFLSINRAMSLDSVDVDLSKELQAPTRPILKTQ VEAAWRGRAIGAEAVNGVASPRWRLVPTRREQAKWDRAAKAATGGSDVILRESKSRGQ QGDPEVLAAKSREQYLELKQRLQLFTLGIGGIGLVSAYFSYSPEIAARADWICPVSPH AWDQCGFLSWWNWRNCEECCCPTKTAYSSGTCDDV</aaseq>

Gene Sequence

<dnaseqindica>2312..2368#1790..1871#1483..1574#1242..1328#987..1085#793..892#648..706#99..458#acgaggtgtgtctctctcccgttcacccgtccgtatccttcccggatcactctctccactctccgctccccaccgcgcgagagatattttcgcgcgccatgtcgctgcccgccctcgccgccggccgcgccgcctccgtgcggccgccgcgcgcctcggcggcctcgggggaggcggctgctgctgcggcggcggatcagccggcggggcggaggccggtgaaggtgatactgccgaagaagaagccgcagaagtggtcgacggggatggcgcccggggagtacggcggcgggccggcgacgcccaagccgcgcaagtactggatggggaaggaggaccgcgaccccgtgggcaacaccgacgacttcatctggaacaaggacttcctcccacacatggagcgcgtcatcgccaacggcggcgcagacacgccccccaccatcacccgcctcaccccggtacgacgaagccccagacctcactcatctctaatcgcgcgcgtatgattgtgcctatctgctccgatctagtgactgaactagttgcatccgtggcatcgtttgtttcgaaattccaaatcgagcgtagaattttgcctgcactggatgctggtctattgtttctaaagtagcaaatcgtttgagcaggtggatgaggactcggaatcagggttcctaagcatcaaccgcgcaatgagcctcgacaggttactctttcacctcaccctcctatcgaattctctgctcacatttggtgttgcgactgtttagtgacctgtggtttctattgcagtgtggatgttgatctgagcaaggagcttcaggcgccaaccaggccaatcttgaaaacccaggttgaggctgcctggagggggcgggccattggagctgaggtgacagcctgtgatctcattgttcaaatatcttccctttgttatggtgtaccagagatggtgctaagctatggtttgtggatttcgtacgtaggctgtcaacggtgttgcgtctcctagatggaggctagttccgactcgccgggaacaagcaaagtgggaccgagcagctaaggcagcaactggtggcagtgtaagtcactgtaatcttgtcactgatttattggtaaatgtaggtattttttgagatatactacatgtgatagtcttttaactgtttctctctttttttagcatgcatataatggtacttcatagttttggtctatgttcttttgtccccctttaggatgtcatactaagggaatcaaagtcaagagggcagcaaggagaccctgaggtattggcagctaaatcaagggagcaatatctagaggtatatcactcttctttctagttgtttgtttgggtatcgttctttcagacacttgaggaactccattgtccaaaatcagtgacatgtaccttgagaatcaaatatatgtagcttatctattggtctttactaagcagagtgggatgttttgcagttgaaacaaagattgcagttgtttactttaggcattggtggcattggtttggtctccgcctatttttcctactctcctgagattgctgcaaggtataccttggattgattttttcttgatgaataacattgactctgtgtttatttagtgatttttctgacaaatgattatatatttgtatatttgaaacggtaggcaatgattttgattttttactatatagacaaacttgactgtacttttggtttccaccttttaggacttgtttgcttatgttgatattggttgctcttcagctttggtgcagggctgattggatctgtcctgtatctccgcatgcttgggaccagtgtggattccttagctggtggaactggagaaactgtgaagtatgtttcattatgttgtttttcaattggtatttgtggtcttgtggataaacacttgagtggtatttgagaaaagaaaaagataaaacacttgagtagacttcttctcataattggtttagtttggctcagctactaaggctttgtgatctcattttaatattttatagcactgcagtttattaattcaaggtcttgtagaactcgtttagtttggtatatctcgcttaggggtttatcttgaaagaaatctaaaatgataaaacttcatcatctgaacattcccctcccatgtattatacaatgcccttcaattatgttggtcacctctatcttttctttaaaaattttacaacggaatgtgaccgatgttcagcaaatgctaggcaacttttaaaatatgctcacatgcatcttattttattcttgcatgcttacaggagtgctgctgcccaaccaagactgcttattccagtggcacttgtgatgatgtataaccgatggaatgagtaagtagatgaaattttattaaacttttgatgtttgaatattcaaatagtagaacgtatggttttcttacatgtatacctgtgcttgctggtctgatgcaggattttagttccagattatggcttcatgcacctggaattgatacccatgcttgttgggtttttcacctacaagattgcaacatttgctcaggcaattcaagaatctatacctgcagttgggaatcgtgaatcttgaacatagttctggtgaatagaattaaaggtagttgccctgaggaagataggtcacggagatactgaggtgcaagcttttatcctttcttcaacacagtagtaatagttgcctgtgtcaggtcaacaatagtttttaagtagctatgagtatgcttgcagccgatgcatgtacttacgtccaagtgaccattgagaaagtaataagtcctcacggtgcctttgaagccgcataaccatagacttgaaggagtagacaccaattcagaatgatgacatatcttttgctgtcaacagtggttttaaattgctatgaatgtacttacaactgatgcatgtgattctgactgttgaataaatttaaaagatttacgcatatcgtacctttgaagcagaatttctttaagtgcgcatatgattgtacaccttttgaagtgaagtaccttctgtctgtctaatcctgatcaagttgttactattttttacaggccaaggttttataagaatctgatctggggatgttaccaagataagatgcacactcagtcattgaggagcgagtataccatctgaatcttgatccaaattttattatagctgcacaatagaaagtttgtacataggtatgtagtcaacttcatccaacattacacgtaaatcatcaaaaatcatgtacacctctaaacttttagcacagtgaccaccgaattttatggttgatcttaaatttaacagtatatatggtcaggactcgggaccaattctgaatgcgaataacacaggctgtcaatacagctgttttaaaagtcacaattcagtaagcttggggaatcctatggaaacttttctttttcatgaactggagactcttttgaagtacttaactggaatgaggggagtacatatatgacctttatcacattgctccgtgtactgtgtgaaaaacgcacctgcaccagtgcctacttgtttaaaagtggcatgttaaagacaatcacaaccactgcacatggaatctgagacaattactttgaagtatgtttattgtttgacatggagaacaaattaaaaaaactagcaccatatcatcactatcatgaacagctgaactgttatcactataaagtttttactatgatgttttaccctttatttggatttatttggaagatgaattgttgttttccctttgtcctggtcctcctggaatactcctgcctctccccctcatgctattactactgtagtgcatatagaattaagatatgtccataaaacagcttttttcgcaacacatgaatttgtcaggaattctccatgacatctgttacactctcatttgttcaaaaagatgattggcaagaggtcaagtacacacacctaccccgtacattccatttattgcacgcctacggactacagcaactctcagcattgtcacaggtaccacatgaacacatgatctattgaatgacttatggagtaattaactgtgaatggtgcagagccaaaacatgggcaaccaaaagaactcaagaagacgaagatttcaataaatcacggctcaatctgccactctgattcatcatctcattgcctcgaggcctgctgctgctgctagtagtagtagtacattcatttgaactgcctaccaattttgaaagcacccaaatttccaaatttccttttcttatctctttcgttgctggcctcatccatttggccaccaaaagaatcctaaaatggtatctcc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0673800, RefSeq:Os01g0673800