Os01g0674400

From RiceWiki
Revision as of 04:53, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0674400| Description = Protein kinase PKN/PRK1, effector domain containing protein| Version = NM_001185572.1 GI:297720278 GeneID:9272063| L...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0674400

Description

Protein kinase PKN/PRK1, effector domain containing protein

Version

NM_001185572.1 GI:297720278 GeneID:9272063

Length

702 bp

Definition

Oryza sativa Japonica Group Os01g0674400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:29470464..29471165

Sequence Coding Region

29470606..29470766,29470877..29470991

Expression

GEO Profiles:Os01g0674400

Genome Context

<gbrowseImage1> name=NC_008394:29470464..29471165 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:29470464..29471165 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccatgctcgggaggaagagagggggatcgtcgtcggccaagctgccaccccacgccgaggacccgcgtgcggctcctccgccgccgcaggccggcctcaccgccaccgacggtgggcaggaggtggccatgtcgcaattcgtcgcgcagctaggcatggcagacgaggcggcgcggaagaggctggacagcatgaaccagaggctcaggtggctggagcagcagatggagacgctggaggcggaggtcgggaaagccagctccgccgactga</cdnaseq>

Protein Sequence

<aaseq>MAMLGRKRGGSSSAKLPPHAEDPRAAPPPPQAGLTATDGGQEVA MSQFVAQLGMADEAARKRLDSMNQRLRWLEQQMETLEAEVGKASSAD</aaseq>

Gene Sequence

<dnaseqindica>143..303#414..528#agggatcagcacgtctcccagtcgcctccagcaacaagctccgtctcattcattcgccagtggcaagcttatcgccggccggccggccacccaccctcgcgcgatcaatcgatcggtacggtcaagctagctaagacgagctatggccatgctcgggaggaagagagggggatcgtcgtcggccaagctgccaccccacgccgaggacccgcgtgcggctcctccgccgccgcaggccggcctcaccgccaccgacggtgggcaggaggtggccatgtcgcaattcgtcgcgcagctaggcatgtgcgaagcctccgctcgagtagcgaaagcattttgtaagttgtaaccaatggatggatggttgaggaatttgatttttttttcttctttttttgggtgcgtcttggcatggcagacgaggcggcgcggaagaggctggacagcatgaaccagaggctcaggtggctggagcagcagatggagacgctggaggcggaggtcgggaaagccagctccgccgactgatgatcacctagtacatctttgtagcaacacccttttttctttagtcttacagatatgtagttcgatgatgatgatgatgatctgatcgccttttctagcttaatctctcttttgttcgatgcgttggagcagcgcctttttgcctggaacctctgccacgttttaggggtgagt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0674400, RefSeq:Os01g0674400