Os01g0674500

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Revision as of 04:53, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0674500| Description = Similar to Tubby-like protein 3| Version = NM_001050375.1 GI:115439120 GeneID:4325911| Length = 4978 bp| Definition...")
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Gene Name

Os01g0674500

Description

Similar to Tubby-like protein 3

Version

NM_001050375.1 GI:115439120 GeneID:4325911

Length

4978 bp

Definition

Oryza sativa Japonica Group Os01g0674500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:29472086..29477063

Sequence Coding Region

29475420..29475457,29476658..29477063

Expression

GEO Profiles:Os01g0674500

Genome Context

<gbrowseImage1> name=NC_008394:29472086..29477063 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:29472086..29477063 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gcggacgcggttttccagtacaaaaaccaaaagaaagagccccgcgacctagtggagaggcggtacactggtggtggtgggggtggtgtggtgggggacgcgacgcgacgagatgcctcgggagacgccgccgccgccgccgccggagggcggcgaggtgcacgaggtggtggagggggaggacgggcaggcggaggaccaggaggagaggtgggcgcggctgctgccggagctgatgtccgaggtggtgcggcgcgtggaggcgtccgggggcgagcgttggcccgcgcggaaggacgtggtctcctgcgcctgcgtgtgccggcggtggcgggacgctgccgtcgccgtcgtgcggccgcccgcggagtccggcaagatcaccttcccgtcctcgctcaagcagccagggccaagggagttcccaatgcaatgtttcattaa</cdnaseq>

Protein Sequence

<aaseq>ADAVFQYKNQKKEPRDLVERRYTGGGGGGVVGDATRRDASGDAA AAAAGGRRGARGGGGGGRAGGGPGGEVGAAAAGADVRGGAARGGVRGRALARAEGRGL LRLRVPAVAGRCRRRRAAARGVRQDHLPVLAQAARAKGVPNAMFH</aaseq>

Gene Sequence

<dnaseqindica>1607..1644#1..406#gcggacgcggttttccagtacaaaaaccaaaagaaagagccccgcgacctagtggagaggcggtacactggtggtggtgggggtggtgtggtgggggacgcgacgcgacgagatgcctcgggagacgccgccgccgccgccgccggagggcggcgaggtgcacgaggtggtggagggggaggacgggcaggcggaggaccaggaggagaggtgggcgcggctgctgccggagctgatgtccgaggtggtgcggcgcgtggaggcgtccgggggcgagcgttggcccgcgcggaaggacgtggtctcctgcgcctgcgtgtgccggcggtggcgggacgctgccgtcgccgtcgtgcggccgcccgcggagtccggcaagatcaccttcccgtcctcgctcaagcaggtgaggaaagggggggggggggggtgatgcccttctgctgttttgctaagagctcctatccctcgattgatgggggcttctggccgctgattcgaagtatggtggtagggagtggaaacccccattacgtcgatttgttttagcaggtgtcgttcctagatgcgatttgttatgtctctggttggtgatttagagagtcctctatgcttttgattgctaaatttggagcctgcgtctttaggttccctcagttctggccataggatgctgagatcacttgctcatgctatttttagaggattatttaatttttgaggtttacaaatttaccttttttattcgcgatgtttcgtgggattagttaatttgtttatgtctagtcctagctatttgtttttggagtaagttaactttcaatcgattttgatactagtatttttttttataagagtttgtggatttaacttaaaactaggctcgggagcaactagatttagttagtacaatggatgatttatatcgcacttgttctttttatggctttggcaaaatcaccacatcgttggtagatagcagtatagcacactggaggcttggaaggaaaaacaaacccgaggagggtcgtccgctatgaatgaatagttggaaaatcttatcaccagcagtttgaattttcatgcttttggctacagatttgatgttaggaccatattccagcatgtatatagtctagctttacttagtcccgttctaagctccaacaacatccagatttttcctcgatttccgttagcacgcttttcaaactgctaaagattgtatttcatgcaaaaactttctatatagaagttgctataaaaaatcaaataaatccattttttaatttttaataattaaaacatcattaaccatgcgctaatgagtctcgttttacatgcgcacttaatcttcatccaataatcagattcgaacggggccatatgtgtttagctatttactatcctatcacacagagggtgatttcacttataagtgggagtttagtggctgaaattccccatgagatgagtagcatagttttgttttgggtgattcgtctacgtaggattttagttgcagtcttgcagaggagtgtcgtagttttgatacacagtatttgtatgcaaattaatcggagttcttacaccttttgtcaagcagccagggccaagggagttcccaatgcaatgtttcattaagcggaataagaagaactctacgttctacctctaccttggtttgacaaatggtaagtgtatgactgtacgtgatgtgatatgagaacttccttgactctcatttattttgtgctgcatatgtgcaggcatcaatttgattatgtgcatctagataatcaatttgatttgccatctcaatgtaaggcatgtgacatgctgttttatgattgctgtgcgggttctgtttttcttggaatttgttacttgtctgtggttgacacttgatgcctagcagtagtcaagttgaatgcttttagatttaactcaaattcgttgtggctttaattggagatgcatcgcttgtttctcctagttgatggcttgatgttgacctatcaacttttggcatgggcagtcccatgcacatttgcttcctggctttcattttttttctatagattcaaattatctgtcaaaccagcagaaatgcacagtatgtttgcattctaggaccatgtgatattttgcatttggatcttttggcataattggtatgggatggtgggaggataaggtggaggattggagcacctaatggattagaacctacagcattttacttgaattaggaactaatattgttttgtacctgcctattttttgtgaaacaactgataagaaattgataagagatgccccttcgggattatgtactatgttatgtcctcatgggccaatgggcctagaatatatgggcccgaatatacttaacactgtttatttatttggattggctagtttggacataattgttgaagggtttagctgaattataccaaagtcttcgtgtcctgcaaatagtgattagggtgactggaagtctacttgttccattacatttgatggcctgcttagtcaagtgttttcaaatttcttttattttgacaatcagatccaacagcactcaaattatgtatctagaagcaacatttttctctccttacaggcttacactcagctgttcaagtgtaacatctaacatgtgcggatatgtgttttttttaaaaaaaagaaaaagaaaaaggatgggggttctgtcagttacaccgtatatttttccttctggtttttgtaccaactgcaatgccatatggactttttcaccatcaaatgtgcttgatgattaatatatactttttgtatatgatagcaactgtggataaagggaagttcctcatggctgctagaaggtttagacgtggtccccataccgagtacatcgtatcccttgatgctgatgacctttcacaaggaagcaatgcatacatggggaaactgaggtgaggttctacatggctgcatagttcactcttaatcattcttgcatattctgttattcatcctgcttagtgctaacaaattggttgcagtaatatatttacaattagggaacatgctaatgcactaaaaatatgtatttagctgatctgcagatgttttttttttaaaaaaaattgggtacccataccataagacaatataagccttctgagttctaaatagtatctgtttctttactatcttgtttttcaatgaggtattggactgttttatagttcaaatggtactccctcgttttttatatatgacgcttgttagttcaatattgaattaactaacgtcgtatatatataaaaaggagggagtatatccttatgttgtaagattgaaccccttaacatggtggcatgctgtgatgccccaaggtctgaactggttttaagtctataatctaaattctaaccccattttggatagagtacacactcacaccaacacacttgcactttcatcctttgtgttcgtgttcaagggtttggttgataccttggactttttctgttttgagggattgataccttggacctggtaagcctgcaaaagtaggccttgtttgggaaagacccggcccatcccctgggattttagccttgccaaacaaggccacaaggtgggactaattcacaccctcatgtgtggacttactcaaaccagggtagggtgtcacacatgcctcctccattccttgattttgtggtttgcaacagtaacagtcaacatgaatcataatccttgcaattgactgccgaagtactttgcatcctcataaattgcacttaaaactgccgaatgcttctattttgtcttagcctttactctttggggagttttcaggctcttcagtttttataacttctcttgttcctttatttgtgctcaaaagtatttcatttatttccttgcaattgattgctgtgtaagtctcacggcagttcctttgagacattatttcactgtcctagattaggttatggccttatttgatttgattccccttatggtgtgcagataatttggactggttgggtatctgttgtgttttcgtgcttgtattggatttttgttgtcttaatttttattcattggtattattgtgcttctgtttagatctgatttttgggggacaaacttcaaaatatatgatagcaagccaccatatgatggcgctaaagcatcaagtagtcgatccagtcggcgttttggaagtagaaggataagtccccaagtgtcagcaggaaactatgaagttggacaggtttcctataaatacaacctgctcaaatccagaggtcctaggagaatgtattgtgcacttgagtgcccttcaactcaagagacatgggaaaactgtctaaagacgaagttcagaaaacccacagggaacacagttctaagaaacaaagctccccgctggcatgagcacttgcagtgctggtgcttgaacttccatgggcgggtgacagttgcatctgtcaagaatttccaactagttgctgctgctgatcccaatgatcctgctagctcgaaggatgaggaaacagttctgttgcagtttggtaaggtcgatgacaatatcttcacgatggattaccggcagccactctcagcgtttcaagcctttgctatcagcctcagcagctttggtaccaagctagcttgtgaatagcaacatagtttgatgtcctcatattgccatctggttgtggttgtggatgcatgccgttgtggttgttcccggcatttttcttctttcatttctttcctttttactctggatatcaaggtactattcatatcctgttcttgtgcgggaaatgtaccattttaccaaatggatttagctccgagaaggaaattgtgttgtaaaacttttgctttttaagtgaaagcagaaggcagtctgttgtacataagttcttgatgaagtgatgataccttttttacttttggctgg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0674500, RefSeq:Os01g0674500