Os01g0677900

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Revision as of 04:53, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0677900| Description = Conserved hypothetical protein| Version = NM_001050389.1 GI:115439148 GeneID:4325268| Length = 3075 bp| Definition ...")
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Gene Name

Os01g0677900

Description

Conserved hypothetical protein

Version

NM_001050389.1 GI:115439148 GeneID:4325268

Length

3075 bp

Definition

Oryza sativa Japonica Group Os01g0677900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:29624617..29627691

Sequence Coding Region

29624636..29626933

Expression

GEO Profiles:Os01g0677900

Genome Context

<gbrowseImage1> name=NC_008394:29624617..29627691 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:29624617..29627691 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcggccgtggtgccccgacgacgcttacgcctgcctctccctcctcctcctgctcctccttcctgcagccatggccacgtcgtactcctctctctgcagcttccccgccgaggccgccgacctcgtcgtcaccgccggagaacaccagtccatcgcggaccggctcaatcttcccttgccctccgacggttacttctccggcggcgacaagctcctcttcgcctccgacgaccaccgcctcccacgttccttctccttcttcactcgccgcgcggcccgcaccaccgaccccgccatcacccacctcgtcgccacggtcaccctctccggctaccgcttcttcggcgggcgctcgtggcgcaccaacgttagcgcccactccgtgtcgttcgacctcgaaggttactactccaacgactctgcctcggcggcgctctgcatggtcgggtcaggctcccgcgcaagagacgacggcttgggtgtcgtcatcatcccggacgtcgccctccgcctccggctgccgcgccccgccaccctcacgcggcccttcgtcaccggccgcctcgagggcccggacttcggcgccgtcaccctcgttgcgtacgccgagggtgactacaagtacggtgaggccgcctcctgcccgacgccgcccggcgccgtgcggtccgagagcaaggtgttcgacggaaacttcacgtgcgaccgtctcggggcgctgctccgaggctcctacaccatggagtacgcggagggacgcgcgccgagcggcttccctctgcgccaacgccttcgcagcatgcacatcagcgagatttactgcggcgagaacggcgccgtgcgcgcgtacatggtgttcgacttcgacgacgcctcatcggacgccattcttctaggcatccacgaagcgccgtggaggcgtggcttccaggccgacggggacgaggcgctcgtcgccgacgggttctggaaaccgtcccagggacggctctgcctcagggcgtgccgcaccgtgcgctcgacggtgcgcgagagcgactgcggcatccggatccacttctggttcccggccgtgtggtcgatccagcaacggagcttcgtagccgggatgatccggaacacgaggagcgacgacgacggcgacacgaacaaaatgtccggcgcgatatcggtgtcaagaactggcttcaggggcgatctctccgacatcaagtaccattacaccagagtggaggacgccaagaactactaccactccaacccagagctgagcaaggagaggaacggcaggtttccggggaactactcctaccgggacttcgcgttcagtttgtacatcacgacacacggcggatacgggtacgcctcgccggtcacgctcggttccgccatggttgacggtggcacgctgacggccgacgacgcgttctctcgccacgctgtggcagagatgatcaagcagaggctcctgagtgtcagctacgaattcgatatccacctctatcgtcgcgtgaattcatccagggcgtggaatgtgtcgcgtgtgcctgatcggtggcgcgtctcggcggaaggcgtttatgataccaagtcaggtaccctgtgcatggtaggttgccgagtgatcaacagttcgtcggactgtcagatcctagtgaccgtgcaactccctgcgctgggcggcgaggacggcactgggtcaatcagcagcctgaggaagaagagtgacaccctcttcttcgagacgcttggttttgctgcgtatggtgcgcagcccgccatagaggcggcccaggcgatctcgagggtggacacggagcgcatcatgctggtgacctccatgacgctgtcctgcgtcttcctcgtcctgcagctgcgccacgccaggaagaaccccgacgcgctcccggccacgtcgatcaccatgctcgccgtcctggccctgggttacatgatccctctcgtggtcaactacgaggccatgttcgtggacgacggcggcagcagaaacaggcacttcatcgagctggcgaggggcggccgccggtggctcgagctgaacgagttcgtgctgaggctcagcaccatggtggcgttcgtgctgcagctgcgcctcctgcttctcgcgttgtccgcgagatcaacggccggagcgagcggcggcggggacgaccggtgggcagccgagcggagcacgctctggatatgcctgcccctatacatcgccggagccatcctgatctggatcccccacatcggtgacgggcacgatcatcagccgttggccagatga</cdnaseq>

Protein Sequence

<aaseq>MARPWCPDDAYACLSLLLLLLLPAAMATSYSSLCSFPAEAADLV VTAGEHQSIADRLNLPLPSDGYFSGGDKLLFASDDHRLPRSFSFFTRRAARTTDPAIT HLVATVTLSGYRFFGGRSWRTNVSAHSVSFDLEGYYSNDSASAALCMVGSGSRARDDG LGVVIIPDVALRLRLPRPATLTRPFVTGRLEGPDFGAVTLVAYAEGDYKYGEAASCPT PPGAVRSESKVFDGNFTCDRLGALLRGSYTMEYAEGRAPSGFPLRQRLRSMHISEIYC GENGAVRAYMVFDFDDASSDAILLGIHEAPWRRGFQADGDEALVADGFWKPSQGRLCL RACRTVRSTVRESDCGIRIHFWFPAVWSIQQRSFVAGMIRNTRSDDDGDTNKMSGAIS VSRTGFRGDLSDIKYHYTRVEDAKNYYHSNPELSKERNGRFPGNYSYRDFAFSLYITT HGGYGYASPVTLGSAMVDGGTLTADDAFSRHAVAEMIKQRLLSVSYEFDIHLYRRVNS SRAWNVSRVPDRWRVSAEGVYDTKSGTLCMVGCRVINSSSDCQILVTVQLPALGGEDG TGSISSLRKKSDTLFFETLGFAAYGAQPAIEAAQAISRVDTERIMLVTSMTLSCVFLV LQLRHARKNPDALPATSITMLAVLALGYMIPLVVNYEAMFVDDGGSRNRHFIELARGG RRWLELNEFVLRLSTMVAFVLQLRLLLLALSARSTAGASGGGDDRWAAERSTLWICLP LYIAGAILIWIPHIGDGHDHQPLAR</aaseq>

Gene Sequence

<dnaseqindica>20..2317#cccggctagctgttcgaaaatggcgcggccgtggtgccccgacgacgcttacgcctgcctctccctcctcctcctgctcctccttcctgcagccatggccacgtcgtactcctctctctgcagcttccccgccgaggccgccgacctcgtcgtcaccgccggagaacaccagtccatcgcggaccggctcaatcttcccttgccctccgacggttacttctccggcggcgacaagctcctcttcgcctccgacgaccaccgcctcccacgttccttctccttcttcactcgccgcgcggcccgcaccaccgaccccgccatcacccacctcgtcgccacggtcaccctctccggctaccgcttcttcggcgggcgctcgtggcgcaccaacgttagcgcccactccgtgtcgttcgacctcgaaggttactactccaacgactctgcctcggcggcgctctgcatggtcgggtcaggctcccgcgcaagagacgacggcttgggtgtcgtcatcatcccggacgtcgccctccgcctccggctgccgcgccccgccaccctcacgcggcccttcgtcaccggccgcctcgagggcccggacttcggcgccgtcaccctcgttgcgtacgccgagggtgactacaagtacggtgaggccgcctcctgcccgacgccgcccggcgccgtgcggtccgagagcaaggtgttcgacggaaacttcacgtgcgaccgtctcggggcgctgctccgaggctcctacaccatggagtacgcggagggacgcgcgccgagcggcttccctctgcgccaacgccttcgcagcatgcacatcagcgagatttactgcggcgagaacggcgccgtgcgcgcgtacatggtgttcgacttcgacgacgcctcatcggacgccattcttctaggcatccacgaagcgccgtggaggcgtggcttccaggccgacggggacgaggcgctcgtcgccgacgggttctggaaaccgtcccagggacggctctgcctcagggcgtgccgcaccgtgcgctcgacggtgcgcgagagcgactgcggcatccggatccacttctggttcccggccgtgtggtcgatccagcaacggagcttcgtagccgggatgatccggaacacgaggagcgacgacgacggcgacacgaacaaaatgtccggcgcgatatcggtgtcaagaactggcttcaggggcgatctctccgacatcaagtaccattacaccagagtggaggacgccaagaactactaccactccaacccagagctgagcaaggagaggaacggcaggtttccggggaactactcctaccgggacttcgcgttcagtttgtacatcacgacacacggcggatacgggtacgcctcgccggtcacgctcggttccgccatggttgacggtggcacgctgacggccgacgacgcgttctctcgccacgctgtggcagagatgatcaagcagaggctcctgagtgtcagctacgaattcgatatccacctctatcgtcgcgtgaattcatccagggcgtggaatgtgtcgcgtgtgcctgatcggtggcgcgtctcggcggaaggcgtttatgataccaagtcaggtaccctgtgcatggtaggttgccgagtgatcaacagttcgtcggactgtcagatcctagtgaccgtgcaactccctgcgctgggcggcgaggacggcactgggtcaatcagcagcctgaggaagaagagtgacaccctcttcttcgagacgcttggttttgctgcgtatggtgcgcagcccgccatagaggcggcccaggcgatctcgagggtggacacggagcgcatcatgctggtgacctccatgacgctgtcctgcgtcttcctcgtcctgcagctgcgccacgccaggaagaaccccgacgcgctcccggccacgtcgatcaccatgctcgccgtcctggccctgggttacatgatccctctcgtggtcaactacgaggccatgttcgtggacgacggcggcagcagaaacaggcacttcatcgagctggcgaggggcggccgccggtggctcgagctgaacgagttcgtgctgaggctcagcaccatggtggcgttcgtgctgcagctgcgcctcctgcttctcgcgttgtccgcgagatcaacggccggagcgagcggcggcggggacgaccggtgggcagccgagcggagcacgctctggatatgcctgcccctatacatcgccggagccatcctgatctggatcccccacatcggtgacgggcacgatcatcagccgttggccagatgaagtccgccatccacgtgccgccgccgccgccgccgccgctgtcggacgacctcctctcctacgccggcctgatactggacgggttcctgctgccccagatcgtgtccaacgcgttctcggcctccagggtgaacgccatctcgccgtggttctacgtgggcggcaccgcgatccgcgcggcgcctcacgcgtacgacgggctcagggctcgggggtacgtgcagaggtggatcccgtcctacatcgacgtctacgcggggcctcgtgacgggctcttcagcgtcgcgtgggacgtcgtgataccgtgcggggcggcggcgctggccgtgctgctcttctttcagcagcggctcggaggtgatttcctgtgttgtgtgaagagaaggaagccggggggatcatacgagatagtctcgacgtcaacactttaactgttgaccggcaatccgtggcattcgtagacattagtgcggtttgaataaacaatacagggggcgcaattagggcccgggcgccggacgtcctatatttacacggaattgcaactcatgtttaaaaatgcgtcaaatttagtgtgggacattaaaaaaataatctttgctagaatgatatcgaaaaaacgtggttttgctagtacactattgaatgattttcggcggttttgggaggaaattttcacgaaatgattatttccgcgcgctgaagtcctggaatggatacggcaaaaatttaaaaatacactgatcattcattttttt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0677900, RefSeq:Os01g0677900