Os01g0678400

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Revision as of 04:53, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0678400| Description = Conserved hypothetical protein| Version = NM_001050392.1 GI:115439154 GeneID:4325271| Length = 1678 bp| Definition ...")
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Gene Name

Os01g0678400

Description

Conserved hypothetical protein

Version

NM_001050392.1 GI:115439154 GeneID:4325271

Length

1678 bp

Definition

Oryza sativa Japonica Group Os01g0678400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:29652200..29653877

Sequence Coding Region

29652240..29653877

Expression

GEO Profiles:Os01g0678400

Genome Context

<gbrowseImage1> name=NC_008394:29652200..29653877 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:29652200..29653877 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggggctaaccaagaatcgtagcacctctgcttgccgcctctgcttcatcctcctcctcgtcctatccgccaccaccaccaccctctccaccgcgctgtccggaccctactcctcccggtgcgcgtccccgtcaccagctgccgaccaacacaccggcgtggacgacgcctctgcgctcctccgatcgttccggattacctctggcatcttctccggcgaaggggcggagaccctgttctcccctcgttcctactactcaatcgtgggtcagcactcgttcaccgacagcttcgccaggcgctccttctcccttctcccccacgccgtgtcccgcaccaccgaacccagcgtcatccacctcacagccaccctcaccctgttcggcagccgcgtgcagttattcgagagcgacctcacacgtgaatccgcgaaggaaggacattccatctccttctacctcgacggatactactcgtccgcaaccacgcaactctgtatggtcggcaaggggagtgacctttccattgatggttcagtgaaacattacatggacgtcgctctccgcctccggatccccagcatttccagcctcaccgaccccttcgtcaccggcatcctcgagggcgccgacttcgagcccttctccctcctcacgtacgccgaggggagcagctacaggtacagcgagaacacatcctgcctgccgctcccggtgccggaggccgctgctgccgcgcggcgggccatccagacgacgccggacggcaacttctcgtgcgacactctcaaggcgcggctcgccgcgtcgtaccggctggagtacgggcgcgcgcacgcggtgagcttcccctcgctgcacgagccacgcctgcacgtcaaccagctgcactgcaccgcgggcggcgcggtgcgagcgtacgcggtgttctccaacgacacggccaacatgtggggattcagggacttcttctcgtcccaggaggcggcggtcgtcgcggacgggcactgggacagtgacaccaaccgtctctgcctccgcgcgtgcctggtggcgcgctcctcgccggcgacgccgtcagccagcactgagcttgaggtgcgcgagtgcgggatcgggatgagcttctggttcccggccgtgtggacggtacgggaccggagtgtcaccgccggcgtgctctggaacgcgacccagctgaacagcagcgacaaccacgcaagtgtaggctccgacgtcgctctgataaccgcgtcgagcttcgaggagtggaagggtaacctctccgacgtgaactacaactacagcttcaccatgcttgaggaggccaagaagcattacctcaagaccgggccgagcgatagcaagaagaatagcaagggttcgttcccggggaactactctcactcataccgtgacttccgtttcccgttcttcttggagggagaaacagggtctggaaccgcctacccggtcgcgatcggctcggcgatggtcgacggtgacaggctggctgccgaacattcgttctcacggcacgcggcggcgcaacttgagcagggtacactggtgaatgtcagctatggtgtgacgtactacgttgcacctaagaattggtcttcctttggccagctc</cdnaseq>

Protein Sequence

<aaseq>MAGLTKNRSTSACRLCFILLLVLSATTTTLSTALSGPYSSRCAS PSPAADQHTGVDDASALLRSFRITSGIFSGEGAETLFSPRSYYSIVGQHSFTDSFARR SFSLLPHAVSRTTEPSVIHLTATLTLFGSRVQLFESDLTRESAKEGHSISFYLDGYYS SATTQLCMVGKGSDLSIDGSVKHYMDVALRLRIPSISSLTDPFVTGILEGADFEPFSL LTYAEGSSYRYSENTSCLPLPVPEAAAAARRAIQTTPDGNFSCDTLKARLAASYRLEY GRAHAVSFPSLHEPRLHVNQLHCTAGGAVRAYAVFSNDTANMWGFRDFFSSQEAAVVA DGHWDSDTNRLCLRACLVARSSPATPSASTELEVRECGIGMSFWFPAVWTVRDRSVTA GVLWNATQLNSSDNHASVGSDVALITASSFEEWKGNLSDVNYNYSFTMLEEAKKHYLK TGPSDSKKNSKGSFPGNYSHSYRDFRFPFFLEGETGSGTAYPVAIGSAMVDGDRLAAE HSFSRHAAAQLEQGTLVNVSYGVTYYVAPKNWSSFGQL</aaseq>

Gene Sequence

<dnaseqindica>41..1678#atcgaacttgctagcctcatcctccctcggtgtctctcagatggcggggctaaccaagaatcgtagcacctctgcttgccgcctctgcttcatcctcctcctcgtcctatccgccaccaccaccaccctctccaccgcgctgtccggaccctactcctcccggtgcgcgtccccgtcaccagctgccgaccaacacaccggcgtggacgacgcctctgcgctcctccgatcgttccggattacctctggcatcttctccggcgaaggggcggagaccctgttctcccctcgttcctactactcaatcgtgggtcagcactcgttcaccgacagcttcgccaggcgctccttctcccttctcccccacgccgtgtcccgcaccaccgaacccagcgtcatccacctcacagccaccctcaccctgttcggcagccgcgtgcagttattcgagagcgacctcacacgtgaatccgcgaaggaaggacattccatctccttctacctcgacggatactactcgtccgcaaccacgcaactctgtatggtcggcaaggggagtgacctttccattgatggttcagtgaaacattacatggacgtcgctctccgcctccggatccccagcatttccagcctcaccgaccccttcgtcaccggcatcctcgagggcgccgacttcgagcccttctccctcctcacgtacgccgaggggagcagctacaggtacagcgagaacacatcctgcctgccgctcccggtgccggaggccgctgctgccgcgcggcgggccatccagacgacgccggacggcaacttctcgtgcgacactctcaaggcgcggctcgccgcgtcgtaccggctggagtacgggcgcgcgcacgcggtgagcttcccctcgctgcacgagccacgcctgcacgtcaaccagctgcactgcaccgcgggcggcgcggtgcgagcgtacgcggtgttctccaacgacacggccaacatgtggggattcagggacttcttctcgtcccaggaggcggcggtcgtcgcggacgggcactgggacagtgacaccaaccgtctctgcctccgcgcgtgcctggtggcgcgctcctcgccggcgacgccgtcagccagcactgagcttgaggtgcgcgagtgcgggatcgggatgagcttctggttcccggccgtgtggacggtacgggaccggagtgtcaccgccggcgtgctctggaacgcgacccagctgaacagcagcgacaaccacgcaagtgtaggctccgacgtcgctctgataaccgcgtcgagcttcgaggagtggaagggtaacctctccgacgtgaactacaactacagcttcaccatgcttgaggaggccaagaagcattacctcaagaccgggccgagcgatagcaagaagaatagcaagggttcgttcccggggaactactctcactcataccgtgacttccgtttcccgttcttcttggagggagaaacagggtctggaaccgcctacccggtcgcgatcggctcggcgatggtcgacggtgacaggctggctgccgaacattcgttctcacggcacgcggcggcgcaacttgagcagggtacactggtgaatgtcagctatggtgtgacgtactacgttgcacctaagaattggtcttcctttggccagctc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0678400, RefSeq:Os01g0678400