Os01g0679600

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Revision as of 04:53, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0679600| Description = Conserved hypothetical protein| Version = NM_001050402.1 GI:115439174 GeneID:4325281| Length = 3669 bp| Definition ...")
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Gene Name

Os01g0679600

Description

Conserved hypothetical protein

Version

NM_001050402.1 GI:115439174 GeneID:4325281

Length

3669 bp

Definition

Oryza sativa Japonica Group Os01g0679600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:29717614..29721282

Sequence Coding Region

29717641..29717802,29717884..29718024,29720510..29720578,29720902..29721021

Expression

GEO Profiles:Os01g0679600

Genome Context

<gbrowseImage1> name=NC_008394:29717614..29721282 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:29717614..29721282 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaaggcggcggagcaaccgcacccgccgcgccgcacccggcggtggcgccgctggcgttcctgctggggaagtggcgcggggaaggcgaggggagcttccccaccatctcccccttccgctacggcgaggagctcctcttctcccaccacccctccaagccggtgatctcgtacacgcagaggacgtggaaggcggcgtcaggcgagccgatgcacgccgagagtgggtactggcggccccgccccgacggctccgtcgaggttgtcatctcgcagagcactggtctggccgaggttcagaagggttcgtttgatgctgaaaagaaaacagtgacgctccaaagcgaacttgtggggaacgcatccaaggtgaaacagatcacaagagcttttcaattggtagatggggagctctcatatgttgttcagatggcaacaatcacaaccagtctacagccacatctcaaagcccttctgaagaagatttga</cdnaseq>

Protein Sequence

<aaseq>MEGGGATAPAAPHPAVAPLAFLLGKWRGEGEGSFPTISPFRYGE ELLFSHHPSKPVISYTQRTWKAASGEPMHAESGYWRPRPDGSVEVVISQSTGLAEVQK GSFDAEKKTVTLQSELVGNASKVKQITRAFQLVDGELSYVVQMATITTSLQPHLKALL KKI</aaseq>

Gene Sequence

<dnaseqindica>28..189#271..411#2897..2965#3289..3408#aggaatcgaaacggagaccccgaggaaatggaaggcggcggagcaaccgcacccgccgcgccgcacccggcggtggcgccgctggcgttcctgctggggaagtggcgcggggaaggcgaggggagcttccccaccatctcccccttccgctacggcgaggagctcctcttctcccaccacccctccaaggtaaacgacctcctcgcctgtatctgtatatctctttcgctcgccaaagcttttaccttttctcgaccatgccgcacgcagccggtgatctcgtacacgcagaggacgtggaaggcggcgtcaggcgagccgatgcacgccgagagtgggtactggcggccccgccccgacggctccgtcgaggttgtcatctcgcagagcactggtctggccgaggttcaggtgagctcctactgccaatcgagttattattctaaacgtggcctgatgttaagagtctatcttgcacctgcaatgctccttgagaacaatcgcaaattgctatgctggtagctgcagtctgcagagtatgtgctgactggtgagtgaattgattctcttgtgctacgccaagagccattaggaggaacactcgatatcattgaaatgtgaccttaactggtgtgaaacttgtgttgacccacatttagctatccataattggaaagagcaatgcctgctactatgtattaggaaacccagaacccgaagagatcggcagcaagaacttgaacaaaaacaacacacgtgaacactgtagtccaggggcggagcttgggcaagcctaattaaaaccgttacccatatattcaacagttaaaaaacaacatttttattagaaaaatggactattagtatgtgtggtctcctacatggatgcttaggcaccgattaattcacataactaatttttctggccttaagtgcatgcacaaacagactcaaccaaatgcgcatgcatgcaaaagcaaaaatcaagcacccatcttgctgcttgcattgaaaatatggcactctatgaggtttttaactgacactttgcctggaaagacaacaaattagtgtagagaaatcagtcgatctcaatggatcgcacatgcggagaaccctagccggacaatgaatccgctgcactatagtcaatcctgcatgctaggaaatttgtgctgcgaacaagctgcaacgttttctagttttcttgctactttccatggcatttggcttgcccagctccttggcgatttcaagaacactaaatttggcatcgttgagctgaaggtgcacaataagtctagcttggccctcatgaagaatacaattttccatgatagaagcaagcacatccaaacgaagtttcattttattcatgatgcattggagaatggagaaattcagctagatttcatcagcactagaggtcaacgcgcagatatcctgaccaaggcgctaccttatgcaagatttcaagaactgcaagatcaaattagtatggtttcaattgattaggcacactagtttagagggagatttgttagaataaacatgtgtgcctaatttatttaagttagttttctctccgttgctttgcgttggtctatatacacaagctcacaagttgtgtggttgtcatgtgtgcgagttgtttggggcgttcgagattagctcatggttggccacgtcccacgccatgaccgagacacacgtcgtgcaccatgcacatggatgcgacactagcacgacatgagaatcgctcttgccttagttatttccgttgttaccaactgtctttagatagcaagaaaaccagaaaactgtgcagcttgtccacagcacaatttccgcagcttgtccatagcacaatttcctagcgtgccgaattgaccatagtgtacgttgtgtttgtcttcatcagcagcagcagcagatagccagttgagtctcccgcctctttgacgacgcggtgtataaccagcctgtggtcgctcccgaagcatggcagtcagagcctccaggagcacgtgcggttggtgacgctgactgctgacacagagagtgagtgcatcctcgagacatgaacatgttgtaaagagcacgatctcaagtccaagccttgaacctcgctctgatatcaattgttaggaatccccaatagatcggcggcaagaactcgaacaaacacaacgcacacaaacattgtagtcaatccggcactctagaaaaatttgtgctgcgaacaagctgcagcgttttctggttttcttgctatatctaaaggcagttggttacaacggaaataacaacacgagagcgattcacacgccgcgctagtgccgtgtcccgcatgacgtgtgtctcgttcatggagtgagatgctggcagccacgagataatctctgatgccccaaataaactcgcacgcacggcaaccgcacaactcgtcagctcgtgcatatagacctatgcaaagcgacagaaagagaactaaactaaatcaggcagacatgttgattctaacactatgatcattcatcagcctgcaatcttctgatgtttccattttgcatattcttgtcaatgttatggtttgctcggtccttcccctctatttcagaaatcgttccaagaatctctccaaacatgtttgtgaatatagttcaatgcccaaatgatagttgtcattctgtacatctatggttaatacggccaaaaggtaatgacgaatcagctagtaggttttgaattcggattaatcattccattaataatttttcttatgtcacattccattgataatgtttcttatgtcacttagcgagagctcttttaatttatatgtcttcctaattgtgtttcgatttatctccatgcattcacttccaaattgcagaagggttcgtttgatgctgaaaagaaaacagtgacgctccaaagcgaacttgtggggaacgcatccaaggtacttttgttctgctcacaagaatattgcagatgaattaccaatctatagttttcttcaaatgcactaatttaatttgcttaataccgtgcactacattgaaataacattgccatatgattttactgcattatcggcacacttgaaccaccaggtctccgagattatgtccaactgctacagcctcagtagcctgaaaactctggagtggtttactagatacttctacaatttggatacttctaaaatgatactgagatgaatttagcttgtgttttttcattattacagtttttgacaaaggtcttgtgtgttcttgtcaggtgaaacagatcacaagagcttttcaattggtagatggggagctctcatatgttgttcagatggcaacaatcacaaccagtctacagccacatctcaaagcccttctgaagaagatttgaacgatactgcgcccctctaggggcgcagtgcggcggcgtctgtggcacttctggatttttatgttaaaataataatggtatttttgcctattatatctgggaattggggcaacctgcccctactagtttgacataatagacgctgaaaatacgcccttcagagttcagataatgtccatgcgagttcgggcttgttcatgcgcatgagagttcaaactttgttgcgttaaacttaatttaatttaccatcagtattttcac</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0679600, RefSeq:Os01g0679600