Os01g0679700

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Revision as of 04:53, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0679700| Description = Similar to 60S ribosomal protein L37a| Version = NM_001050403.1 GI:115439176 GeneID:4325282| Length = 2386 bp| Defi...")
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Gene Name

Os01g0679700

Description

Similar to 60S ribosomal protein L37a

Version

NM_001050403.1 GI:115439176 GeneID:4325282

Length

2386 bp

Definition

Oryza sativa Japonica Group Os01g0679700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:29721568..29723953

Sequence Coding Region

29721776..29721839,29721930..29722012,29722808..29722896,29722976..29723015,29723874..29723876

Expression

GEO Profiles:Os01g0679700

Genome Context

<gbrowseImage1> name=NC_008394:29721568..29723953 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:29721568..29723953 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgaagcgcaccaagaaggctggaattgttggcaaatatggtactaggtatggtgccagtttgcgtaagcaaatcaagaagatggaggtttctcagcactccaagtacttctgtgagttctgtgggaagtttgccgtgaagaggaaagcagttggaatctggggatgcaaggactgtgggaaggtgaaggccggtggtgcttacaccatgaacactgctagtgcggtcactgtcaggagcacaatccgtcgtctgagggagcagactgaagcctga</cdnaseq>

Protein Sequence

<aaseq>MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK FAVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLREQTEA</aaseq>

Gene Sequence

<dnaseqindica>2115..2178#1942..2024#1058..1146#939..978#78..80#ctcgcacgcgcgccgccgcctccccgacctcgccgccgcttgccgcagacgcctccgttccagcccccgtcgacgagatggtacggcgcctctcctctcccctctctccctccctgcgctggaaaggtgtaccttcgtgtgctgccttcctctagatctgcgagatatttgagtgcgcttgtgctcttgtatttcgtggggctgtactactacccgtgctgttgtattgctgctcgttggtgaattcgtaggcgttggtccgtgggatattgtgggtgctgaatcattggagtttgccgcaatttgatttctatcgatgggtcagaccagagttgtgttgtcttttatgttcgacggaaacatgattctattaaacatgaataggatgggttgtgtacattttgagtgctcaaggtcaagacatccaagtatttgagatttgagttagcatttcattataaaatttagagagattttgatgctaggtctttagaactcagtatattaaaaaaaatgggtttattcagaactctgatgctaaactaacttttctaggcacaagctacaaattttatcccactgaactgtttctcttcaatgctatatttgtccactcaattattcctggaaaatggtcatacttttctctttctccaccaattgttcctgttccatgttatcttcttgtatgacgccaatattgcgtaacaggctttgcaaggcatctagtagcatggaagtcaactgcttagttctagcaaataaaagacctgacttaatgctatctccaatgacaagtttaaatgtttacatgcaagtaacaagcatttggcatgatactaagtagtctttggaatcttaagcctttaggttttaactgagcatcacagtttatctaccagttgtgtaactaaattgtttttgcaatgcttactcagacgaagcgcaccaagaaggctggaattgttggcaaatatggtatggagttctgtaaattgccttatttacttgctcacgtatctgtatttttctcaacttaactcttccaatattataggtactaggtatggtgccagtttgcgtaagcaaatcaagaagatggaggtttctcagcactccaagtacttctgtgagttctgtgggaaggtacatcttttgttcacttttttgttgtacatttttctgactgctttgtactgtttgtgaagtgttaaataggctttcctggctatgcatgtgaatgctctataatgtttgtaataataaatagtatatgaaatcataccgcatagggtctagagtcttgtgcttctgtgacctttaagggcagcaatagttctgctattgcagtaattgatctcagaccagttctggactacaatacatgcttgcacattgataatgtttttatgcagcagtccttgtattatatctttgcctggaaagatggtctcataattgcatttttaattccatgcatcagtttctttttcttttgcaaatcaagatggtatcacacacaacacttattttcatcagctgctgttgcctcttagcaaggaaagatggatacacgtataccttccgttccatccattttgtatatttttccttcatagaagctcaatcaatcttggtcttagacttcaattggcctgttaggaactctagagtagtttgatatgtgaaagcaagtttccttatatccctatctttctgttcctgcatgtttagactctctcatagttgttttatcgttgaatggatgggcgttttatctcttttttactgaattgtttcatctagaaaggcgcaataccataaatatgaataattatctgcattttacccccatagttgtcagggatatcaagtttcatctgttttattaaaagctgcagtccttggcattaatgctgctgttgttgtgtgctattacagtttgccgtgaagaggaaagcagttggaatctggggatgcaaggactgtgggaaggtgaaggccggtggtgcttacaccatgaagtatgttcttgttgccagcactttttacctttaaattaaaccatctattttcacaccatatttagcttattttgtatcgtgtctctgcagcactgctagtgcggtcactgtcaggagcacaatccgtcgtctgagggagcagactgaagcctgattgcactacgtttgtgccgtaaggagtcctgtgattctgtatcgagtcaagacctatattggctgttgagccaaagcacatcgtttagcatttttgttctctactttaggatctcctaagcatgttgctaaaacctgtactttgaagccattgtgaacttaaaatcagttacctgcgatccaaatattgaatgagcgctttgcgatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0679700, RefSeq:Os01g0679700