Os01g0680900

From RiceWiki
Revision as of 04:53, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0680900| Description = DOMON related domain containing protein| Version = NM_001050411.1 GI:115439192 GeneID:4324390| Length = 2826 bp| De...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0680900

Description

DOMON related domain containing protein

Version

NM_001050411.1 GI:115439192 GeneID:4324390

Length

2826 bp

Definition

Oryza sativa Japonica Group Os01g0680900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:29784595..29787420

Sequence Coding Region

29784905..29785168,29785820..29786103,29786655..29786709,29786821..29787051,29787151..29787324

Expression

GEO Profiles:Os01g0680900

Genome Context

<gbrowseImage1> name=NC_008394:29784595..29787420 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:29784595..29787420 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcgcgccggtgcggtgctcgtggtggtgctcgccgcggcgtcggtgctgttggcgccgtgggcggcgacggcgcagacatccagctgcgacgacgcgctgcccccggcgctcgccggcaactactccgggctggcctgccgcccggtctggaacaacttcgtcctccggtacgcgcaggggaaggacaacgtgctgcgggtggtgatctcgtcgatgtacagcacggggtgggtggggatggggttctccaaggacgggatgatggtgggatcgagcgccatggttgggtgggtcggcaagacggggctgtcccacgtcaagcagttcagcctccgcgggaagacgccgtcgcaggtggtcgccgacgagggcttcctccagtccaaggaccacgaccacgaccgcctcactgagcaccagggcaagacgtccttcaccttcgatttcaccactggcagctcttcaggttcgtcttacccggatggtctgaagagggcccatggggcactcaacctgtttgcctggggagttctcctgcctatcggtgctatcatcgcgcggtactgcaggagatgggaccctctgtggttctaccttcacgccggcatccagcttgtgggcttcatccttggtctggctggcattgtggccggagtatcgttgtacaataagatccaagcagatgtcccggcgcataggggccttggcatatttgtgcttgtgctgggtatcctgcagattctggccttcttcctaaggcctcacaaggactcaaaatatcggaaatactggaactggtaccaccattgggtaggcaggcttgcgctcttctttgcagccatcaacattgtccttggaatcaaggtcggagccgccggcaactcgtggaagatcggctatggcttcaacctggccatcctcctgatcaccattatcaccctggaggtcctgctatggacaaggtggaaaaacaacaacagcagttcgatgccaacatattaa</cdnaseq>

Protein Sequence

<aaseq>MARAGAVLVVVLAAASVLLAPWAATAQTSSCDDALPPALAGNYS GLACRPVWNNFVLRYAQGKDNVLRVVISSMYSTGWVGMGFSKDGMMVGSSAMVGWVGK TGLSHVKQFSLRGKTPSQVVADEGFLQSKDHDHDRLTEHQGKTSFTFDFTTGSSSGSS YPDGLKRAHGALNLFAWGVLLPIGAIIARYCRRWDPLWFYLHAGIQLVGFILGLAGIV AGVSLYNKIQADVPAHRGLGIFVLVLGILQILAFFLRPHKDSKYRKYWNWYHHWVGRL ALFFAAINIVLGIKVGAAGNSWKIGYGFNLAILLITIITLEVLLWTRWKNNNSSSMPT Y</aaseq>

Gene Sequence

<dnaseqindica>2253..2516#1318..1601#712..766#370..600#97..270#ttgcgattttgggtgattagctccagcagcagataggtgattagttctttcagactttcaccgtttcacgtcgccggccggcgggacacccggcaaatggcgcgcgccggtgcggtgctcgtggtggtgctcgccgcggcgtcggtgctgttggcgccgtgggcggcgacggcgcagacatccagctgcgacgacgcgctgcccccggcgctcgccggcaactactccgggctggcctgccgcccggtctggaacaacttcgtcctccgggtaagttacccacgccgcaccggtgctccggcgagccaagatccgcgtgctcaccgtctcccctctctctctcgatctctgattctctgtgtgtcgcagtacgcgcaggggaaggacaacgtgctgcgggtggtgatctcgtcgatgtacagcacggggtgggtggggatggggttctccaaggacgggatgatggtgggatcgagcgccatggttgggtgggtcggcaagacggggctgtcccacgtcaagcagttcagcctccgcgggaagacgccgtcgcaggtggtcgccgacgagggcttcctccagtccaaggaccacgaccacaccgtcgtggtgcagcaggccaagatctacctcgccttccagctcaggttccagtcgccgctcaggcggcagcaggtgctcctcgccttcggcaacgccatccccgtcaacgaccgcctcactgagcaccagggcaagacgtccttcaccttcgatttcaccactggttcgttctagctctcctctgctgcaaaactgcgaatgtgttttttggttattactcaccgaacacgcacacgcgtgcacaccacactgacagggaaatgtcccattgatatgaagagaactatcccgaaatagaatttcagtaaatgtagctgtgtgctccctcctcctaacataaccaacttttgcctatatccagattcataactagaaattataggaattaattttcttttaggattgagggtgtaggtttgaaagtcgccctgaattcattttttcttttcattgctcaaggattcaaagctcttcttggttaacataaattggttgtgaaaaatcatgtgttatgtgaggtcttacttgtcaaatgaatgacacctggcttgaaaaaaaaaatcgtcctaaaaatgtagaatgagacaatcactcctttgcgtcatgtgatggcttcacctagtcattcttttcttgaaacttctgccatcactttgatttcaaaatgagagatttctaacatcatcgaacaatttggcatttgtccatttgcaggcagctcttcaggttcgtcttacccggatggtctgaagagggcccatggggcactcaacctgtttgcctggggagttctcctgcctatcggtgctatcatcgcgcggtactgcaggagatgggaccctctgtggttctaccttcacgccggcatccagcttgtgggcttcatccttggtctggctggcattgtggccggagtatcgttgtacaataagatccaagcagatgtcccggcgcataggggccttggcatatttgtgcttgtgctgggtatcctgcaggtatgctccttcttcctcgttgcaacaatcatgttagttataacaatgatgttgtactactcagtttacgttcaacattactcttgcaataaccatgttagttatagtcttagcagtatgcatgtactcatctaggaactaatgacagaaagtcagaaaatatgcactatgaatagtcaattattattatgagtaaatttcacaaaactacacgttttatggtccaagctatagaaaactacacacattttgacatgtggcactcaaatacatatattttggtagtgtagttttacaaaaccaaactatcaatgaacagattcacatgtgagatgacatggttgtttcacctaggatgaggacgtggcatcctattaatttcatgcgatggctggtaataggatgccatgttcttgtcctaagtggaacacccacgtcatatcacggctgaatccattcattgatagtgtggttttgtgaaactatactaccaaaatatatgtacttaagcgcctaagtgtcaaagtgtatgtggttttctacaatttggaccacaaaacatatagttttgtgaaatttactctattattattattatgttttccaacaaaaattggatacatggatctgaacatatgtaacattgtacagattctggccttcttcctaaggcctcacaaggactcaaaatatcggaaatactggaactggtaccaccattgggtaggcaggcttgcgctcttctttgcagccatcaacattgtccttggaatcaaggtcggagccgccggcaactcgtggaagatcggctatggcttcaacctggccatcctcctgatcaccattatcaccctggaggtcctgctatggacaaggtggaaaaacaacaacagcagttcgatgccaacatattaagtgtgattaaattaggttgatcttgtcgctgtaacttataactgaaggccctattcttccattagtttcttttaatggttgtaccatttgtgtgatgctgttgctttgatgtttctgcaagatcttttagcagaaaccaaagatgtagtacaagactagtcagttgatgtcttgatgatgagctgtgacgtgcaaaatgacgaggtgaacacaactggtaattgtaatgcagtggcaaaggtgtagtattatactccctccgtttcaagttgtaagatgcgtttcaagttataagatgttttgattttta</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0680900, RefSeq:Os01g0680900