Os01g0685800

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Revision as of 04:54, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0685800| Description = Similar to ATP synthase beta chain, mitochondrial precursor (EC 3.6.3.14)| Version = NM_001050435.1 GI:115439240 Gene...")
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Gene Name

Os01g0685800

Description

Similar to ATP synthase beta chain, mitochondrial precursor (EC 3.6.3.14)

Version

NM_001050435.1 GI:115439240 GeneID:4324151

Length

4240 bp

Definition

Oryza sativa Japonica Group Os01g0685800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:30033545..30037784

Sequence Coding Region

30033655..30034131,30035010..30035085,30035188..30035276,30035420..30035537,30035620..30035723
,30035813..30035971,30036114..30036338,30036421..30036732,30037406..30037519

Expression

GEO Profiles:Os01g0685800

Genome Context

<gbrowseImage1> name=NC_008394:30033545..30037784 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:30033545..30037784 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgacccgccgggccctcacctccgtcctccgctccgcctcccgcctccgcgccgcctccccttccccgtgcccgcgccgcgcgccgctccacccccaccgccgcccgtcccccgcgggcttcctcctgaaccgcgccgccgccgcctacgcgtcgtccgccgcggcgcaggcggcccccgcgcctccccccgcgtcgggcaaggccaccgggggcggcaagatcaccgatgagttcacgggcgctggcgccgtcgggcaggtgtgccaggtgattggcgccgtcgtggacgtgcggttcgacgagggcctgcccccgatcctgaccgcgctggaggtgctcgaccacaacatccgcctcgtgctcgaggtggcgcagcatctcggggagaacatggtgcgcaccatcgccatggacgggaccgaggggctcgttcgcggccagcgcgtgctcaacaccggctctcccatcactgttcctgttggtagggccacacttgggcgtattatgaatgtcatcggtgagcctattgatgagaagggagatatcacaacaaaccacttcctccctatccatcgtgaagcccctgcttttgttgagcaagctacagagcaacagattcttgttactggaattaaggtcgtggatctccttgcaccctatcaaagaggtggtaaaattggtctcttcggtggtgctggggtgggcaaaactgtacttattatggagttgatcaacaatgttgcgaaggctcatggtggtttctctgtctttgctggtgttggagaacgtactcgtgagggtaatgacttgtacagggaaatgattgagagtggtgtgattaagcttggtgacaagcagagtgagagcaagtgtgctcttgtctacgggcaaatgaatgagcccccgggtgctcgtgctcgtgttggactgactggtttgactgttgccgagcatttccgtgatgctgaagggcaggatgtgcttctcttcattgataacattttccgtttcactcaggcaaactccgaggtgtctgccctgcttggacgtatcccatctgctgtgggataccagccaacccttgctactgatcttggaggactgcaggagcggattaccaccacaaagaagggttctatcacatctgttcaagctatttatgtgcctgctgatgacttgacagatcctgcccctgctactacatttgcccatcttgatgctactactgtgttgtcacgacagatttctgagcttggtatttatcctgctgtcgatcctttggattccacatccagaatgttgtctccccatgtactgggtgaggaccactacaacacagctcgtggtgttcagaaggttcttcagaattacaagaatcttcaagatattattgccattctgggaatggacgagctcagtgaggatgataagttgacagtcgctcgtgctaggaagattcagcggttccttagccagcccttccacgttgccgaagttttcacgggtgcacctggaaagtatgttgagctgaaggagagcgttcaaagtttccagggtgtattggacgggaagtatgatgaccttcctgagcagtcattctacatggttggaggaatcgatgaggtcattgccaaggcagagaagattgccaaggagtccgcttcataa</cdnaseq>

Protein Sequence

<aaseq>MATRRALTSVLRSASRLRAASPSPCPRRAPLHPHRRPSPAGFLL NRAAAAYASSAAAQAAPAPPPASGKATGGGKITDEFTGAGAVGQVCQVIGAVVDVRFD EGLPPILTALEVLDHNIRLVLEVAQHLGENMVRTIAMDGTEGLVRGQRVLNTGSPITV PVGRATLGRIMNVIGEPIDEKGDITTNHFLPIHREAPAFVEQATEQQILVTGIKVVDL LAPYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYREM IESGVIKLGDKQSESKCALVYGQMNEPPGARARVGLTGLTVAEHFRDAEGQDVLLFID NIFRFTQANSEVSALLGRIPSAVGYQPTLATDLGGLQERITTTKKGSITSVQAIYVPA DDLTDPAPATTFAHLDATTVLSRQISELGIYPAVDPLDSTSRMLSPHVLGEDHYNTAR GVQKVLQNYKNLQDIIAILGMDELSEDDKLTVARARKIQRFLSQPFHVAEVFTGAPGK YVELKESVQSFQGVLDGKYDDLPEQSFYMVGGIDEVIAKAEKIAKESAS</aaseq>

Gene Sequence

<dnaseqindica>111..587#1466..1541#1644..1732#1876..1993#2076..2179#2269..2427#2570..2794#2877..3188#3862..3975#attccccgcagcgcggagccgccgccactcccccccaccctcaccccgcagaccattcggaaaacctagatccgagccttcccccttcccctcccccggcggcggcggccatggcgacccgccgggccctcacctccgtcctccgctccgcctcccgcctccgcgccgcctccccttccccgtgcccgcgccgcgcgccgctccacccccaccgccgcccgtcccccgcgggcttcctcctgaaccgcgccgccgccgcctacgcgtcgtccgccgcggcgcaggcggcccccgcgcctccccccgcgtcgggcaaggccaccgggggcggcaagatcaccgatgagttcacgggcgctggcgccgtcgggcaggtgtgccaggtgattggcgccgtcgtggacgtgcggttcgacgagggcctgcccccgatcctgaccgcgctggaggtgctcgaccacaacatccgcctcgtgctcgaggtggcgcagcatctcggggagaacatggtgcgcaccatcgccatggacgggaccgaggggctcgttcgcggccagcgcgtgctcaacaccggctctcccatcactgtaatgccctcccccctcttgttccttgtccatcactatgtttggaactgtttatttggatctagtctgacgaaatgacggaccagtagtcggtagatttgatctagatgtacggatccgtgtattgattagggcaggctcaccttacagatccgcgactatagtttgttaatgaatccatgcactgatttagtgcggattcacatatcaaatgccaaatggcgaggccacaaatggaatttgactcttacgaacataattatgcaatacattttctatgttcaaatgctgccccgtagattcatttttccagtccagtcatgccatctggagatggagaaaacatttaccgttggataatttggtaaaggtactgaatgcccttatgggccttttccttttcgtctctatggtcccagaatcacacaaatcaaggaggggccttttgtcttttgggtgtaggggctttatgaagggagggttgagagaaaatgcatgtgacccaatgtaggttcccaatctcaaaatgtgctatgggataacgggaagtccaaaaatgtttcttttaaaataaagttaaagttatcatgtgaagttgaaagttatatttgttttcctgagaaacttaggaagcttaagattaggtgatgggggttgaccctttttttttttgttttgcttacagatattgtggtttgctgattataagttctgtcactctgtgcggcttataatgtgtgtcaaactaaagatcatttgttatttacctgtgacaaaaggctatatatattgtccttgaactttgatgttgtaatgtcagtataaccatctttgatctaaaccatgttctttatatttctttgttttgtctgttttaggttcctgttggtagggccacacttgggcgtattatgaatgtcatcggtgagcctattgatgagaagggagatatcagtaagtctaaatgatatccatttgtatattgtaggtgtatgcatacatactatattttcttccttatgatctttagttattgattacctttctttgccacagcaacaaaccacttcctccctatccatcgtgaagcccctgcttttgttgagcaagctacagagcaacagattcttgttactggaattaaggtacactaatttctgtctcttctgaaatgattttcttaaaccctgtgtctttttaaatttcctagttggttaggtttcttaattgtcaagaggcgttcctttttgtaccattttgtcttacacaaggattgcacatttatcaggtcgtggatctccttgcaccctatcaaagaggtggtaaaattggtctcttcggtggtgctggggtgggcaaaactgtacttattatggagttgatcaacaatgttgcgaaggctcatggtttgctttctacagagcttgatggtcatatccaaagtcttgtgctgtgcattgccttatctggttgacctgtttattttaggtggtttctctgtctttgctggtgttggagaacgtactcgtgagggtaatgacttgtacagggaaatgattgagagtggtgtgattaagcttggtgacaagcaggtaaataagtcacatttcaaatatgatatcagtatatattttctctttaatgaaatttctccttacaaggtagtattttcctttggcagagtgagagcaagtgtgctcttgtctacgggcaaatgaatgagcccccgggtgctcgtgctcgtgttggactgactggtttgactgttgccgagcatttccgtgatgctgaagggcaggatgtgcttctcttcattgataacattttccgtttcactcaggtaagttttgtgagacccttatgccatctcattctggcaattctagcaatggtattcatggtagttgatgcacacattattttttgttatgtgcattattattacacctgacaaagctgttcatttgattattctgtattaggcaaactccgaggtgtctgccctgcttggacgtatcccatctgctgtgggataccagccaacccttgctactgatcttggaggactgcaggagcggattaccaccacaaagaagggttctatcacatctgttcaagctatttatgtgcctgctgatgacttgacagatcctgcccctgctactacatttgcccatcttgatgctactactgtgttgtcacgacaggtatgcctacctaatctttttacaatttgaaatattaatatctttcctatcataaatggatttatttgtactggatatgcagatttctgagcttggtatttatcctgctgtcgatcctttggattccacatccagaatgttgtctccccatgtactgggtgaggaccactacaacacagctcgtggtgttcagaaggttcttcagaattacaagaatcttcaagatattattgccattctgggaatggacgagctcagtgaggatgataagttgacagtcgctcgtgctaggaagattcagcggttccttagccagcccttccacgttgccgaagttttcacgggtgcacctggaaagtatgttgagctgaaggagagcgttcaaagtttccaggtatgtattttgactgttgttatttattcccctttggaacaacatttccacagtagagtttttggctgcaagttacaatgtttaggctatcgtgattatttagatacaagaagagagcagggttttagtatttaagttggaacttggagatcatgtgacaagaactgtggttcatgagatgaactcatctgttatggtcatagaacataaattaaaacctgatgtggcataaaaatcaatttacctgctatttagctatgctaacttgacaatatttgtcaagccctgtatcatcttccttttcctaagtcaatggttacgtggctacaatatagtactccgcaaggcagcagcatattgttgcagtgtaacaagtaatagaaagtagaagtgctaacattactcttgtgaactcgtgtcaaacattaccagtacatctggccattttcttattagtgaagagatatagtttttatgacagccaaaaatgcgtctaaaaagcaatatgttttgttatccttgtttctcatggtgcattatctttgtcctcgggggtcttacaaaatcatcactccaatgtctactctttttttccaccagtcatatgatcatgactcttatcttgtgctgtctgcatttctaccgagtaatgaattttctcaacatgtcacagggtgtattggacgggaagtatgatgaccttcctgagcagtcattctacatggttggaggaatcgatgaggtcattgccaaggcagagaagattgccaaggagtccgcttcataagcgatgcaatttttaacatttggaggtcaacatgttgtgccttttatgtttgttagccaggacatgtacttacatgcaggaggcccggccctgctgatcgatgtttttcccctccacttttttccaaataaggatttgcagtgacctatttgtttggcttactgcccttcaaggaagaattgagttctctttttgtgtgatgtgcggccagtccggcagtccgtgaacttgttacttgctgaaaacactgaaatattggtctccc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0685800, RefSeq:Os01g0685800