Os01g0685900

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Revision as of 04:54, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0685900| Description = Similar to 65kD microtubule associated protein| Version = NM_001050436.1 GI:115439242 GeneID:4324106| Length = 4249 ...")
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Gene Name

Os01g0685900

Description

Similar to 65kD microtubule associated protein

Version

NM_001050436.1 GI:115439242 GeneID:4324106

Length

4249 bp

Definition

Oryza sativa Japonica Group Os01g0685900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:30038659..30042907

Sequence Coding Region

30039093..30039164,30039270..30039476,30040080..30040328,30040459..30040668,30040746..30040901
,30040999..30041158,30041252..30041403,30041494..30041581,30041699..30041775
,30041859..30041933,30042023..30042257,30042348..30042736

Expression

GEO Profiles:Os01g0685900

Genome Context

<gbrowseImage1> name=NC_008394:30038659..30042907 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:30038659..30042907 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagtagcgcggtgaaggaccagcttcaccagatgtcgacgacatgcgattcgcttctactggagctcaatgtgatttgggatgaggtcggtgagcccgacacgacgagggacaggatgctgctggagctcgagcaggagtgcctggaggtctacaggcggaaggtcgaccaggcgaaccggagccgcgcccagctgcggaaggccatcgccgagggcgaggcagagctcgccggcatctgctcagccatgggcgagccgcccgtgcacgttagacagtcaaatcagaagcttcatggcttaagagaggagttgaatgcaattgttccgtatttggaagaaatgaaaaagaaaaaggtcgaacgatggaaccagtttgttcatgtcatagagcagattaagaaaatttcgtctgaaataaggccagccgattttgttccctttaaagttccggttgatcagtctgacctgtcattaagaaagcttgatgagttgacgaaggacctggaatcccttcagaaggagaagagcgatcggctaaagcaagtgatagaacatttgaattctttgcattccttatgtgaggtgcttggcatagatttcaagcaaacagtatatgaggtgcaccctagcttggacgaagctgaaggatcaaagaacctgagcaacactacaattgagaggcttgctgctgccgcaaacagactgcgtgaaatgaagatccaaaggatgcaaaagcttcaagattttgcttctagcatgctcgagctatggaatctcatggatactccacttgaagagcagcagatgtttcagaatataacatgcaatattgctgcttcagaacaagagataactgaaccaaacaccctctccacagatttcctgaattatgtcgaatctgaggtgttaaggcttgaacaactgaaagcaagtaagatgaaagatcttgttttaaaaaagaaagcagaactagaagagcatagaagacgtgctcatcttgttggcgaggaaggttatgcagaggagtttagcattgaagctattgaagctggagctattgatccctcactagtacttgaacaaattgaagctcacattgcaacagtgaaagaggaagcttttagccggaaggatattcttgagaaagttgaaagatggcaaaatgcttgtgaagaggaagcctggctggaagattacaacaaagatgataatcgttacaatgctgggaggggagcacatctaacactaaagagggctgaaaaggctcgtactttggtcaacaagattcctggaatggtagatgttttgagaacaaaaattgctgcatggaaaaatgaacgaggaaaggaggatttcacatatgatggtgttagcctttcgtcaatgcttgatgaatatatgttcgttcgtcaggagaaagagcaagagaagaagagacaaagggatcagaagaagctccaggatcagctcaaagcggagcaggaagctttgtacggatcaaaacccagtccatccaagcccctaagtacaaagaaggcacctaggcactctatgggtggtgcaaaccgaaggctatctcttggtggagccaccatgcaacccccgaagactgatatactgcattcaaagtctgttcgtgctgccaagaaaactgaagaaatcggcactttgtcccctagtagtagaggtttggacattgccggattgcctatcaagaagttgtctttcaatgccagtactctacgtgagacggagacacctcgtaaaccttttgctcagatcacaccaggaaacagtgtctcgtcgacgcctgtgcgccctatcaccaataacactgaggatgatgagaacaggactccgaagacatttacagcactgaatcccaagactccgatgactgttacggctccaatgcagatggcaatgactccctctctggccaacaaggtttcagcaactccagtttcccttgtttacgacaagccagaggtaacattgcaggaggacatcgactactcctttgaagaaaggcggctcgccatctatctggccaggcaaatggtttaa</cdnaseq>

Protein Sequence

<aaseq>MSSAVKDQLHQMSTTCDSLLLELNVIWDEVGEPDTTRDRMLLEL EQECLEVYRRKVDQANRSRAQLRKAIAEGEAELAGICSAMGEPPVHVRQSNQKLHGLR EELNAIVPYLEEMKKKKVERWNQFVHVIEQIKKISSEIRPADFVPFKVPVDQSDLSLR KLDELTKDLESLQKEKSDRLKQVIEHLNSLHSLCEVLGIDFKQTVYEVHPSLDEAEGS KNLSNTTIERLAAAANRLREMKIQRMQKLQDFASSMLELWNLMDTPLEEQQMFQNITC NIAASEQEITEPNTLSTDFLNYVESEVLRLEQLKASKMKDLVLKKKAELEEHRRRAHL VGEEGYAEEFSIEAIEAGAIDPSLVLEQIEAHIATVKEEAFSRKDILEKVERWQNACE EEAWLEDYNKDDNRYNAGRGAHLTLKRAEKARTLVNKIPGMVDVLRTKIAAWKNERGK EDFTYDGVSLSSMLDEYMFVRQEKEQEKKRQRDQKKLQDQLKAEQEALYGSKPSPSKP LSTKKAPRHSMGGANRRLSLGGATMQPPKTDILHSKSVRAAKKTEEIGTLSPSSRGLD IAGLPIKKLSFNASTLRETETPRKPFAQITPGNSVSSTPVRPITNNTEDDENRTPKTF TALNPKTPMTVTAPMQMAMTPSLANKVSATPVSLVYDKPEVTLQEDIDYSFEERRLAI YLARQMV</aaseq>

Gene Sequence

<dnaseqindica>435..506#612..818#1422..1670#1801..2010#2088..2243#2341..2500#2594..2745#2836..2923#3041..3117#3201..3275#3365..3599#3690..4078#gctgtccccttctccggatcccttcgaattctgaaatccccaaattcttctccgcctctcctcccctccccctacagtatttcaaaatatttcaaatcacactacactctccgtcgtctcctctcctctcctctcctccccctctcctccgcctctctcgcatctgaggctccgatcgccggcgaccccagccagaatccgccgccccgtctcgccctccccgctcgacgagaccgcgccgagcggcgaagaggtaagcccccaactcgcctgcggttttctcgggcccgaaaccctaggcttagtcgcgatcccggcgggttactgacgcgcgctgcggcggcggcggtagcggcgcggcgggtgtctcgctgaggaggttggatttgatatctgtgactgctctgcaggcctagtgttcttcgcacctcgcgatgagtagcgcggtgaaggaccagcttcaccagatgtcgacgacatgcgattcgcttctactggagctcaatgtatgtcaccgcttgccgattcaaccatttcccggctactcgtgttggttctggcatggcagtggaggatttacggggtttttttcttctctcgttctgtttcaggtgatttgggatgaggtcggtgagcccgacacgacgagggacaggatgctgctggagctcgagcaggagtgcctggaggtctacaggcggaaggtcgaccaggcgaaccggagccgcgcccagctgcggaaggccatcgccgagggcgaggcagagctcgccggcatctgctcagccatgggcgagccgcccgtgcacgttagacaggttagtttctggctccaccaatggctgtaaaagaggtatcgcatggttggatcaaaagatggaagtcgaattcctgtggaactgtgctaattggcgatggaagaaaaggaagatttagtagagaactaaaagctacgatttctgttgtaagatgatagtactactgcttgcattgttgatctgatggaggtaaaccgtgtagaactccatcagcagttaacatttttctaactgattagtagtagcgtatcaatatattaagggaaagtgttggcagagcttacatttctttctcacttctattctcgactttatgcccagttactgctcaatcggttctatactttttactgctgttcccatgcattagcaatttaggatatatgttttgtaaaatttatctgtttccttcagtttgaatatgttcagcatgaataatatatttactgttttaccggcagcatgactaagttactgcctcaagtacgttttatttgttgaatacattctaccttcttgactaatcaattctgcttgactgtagattttagcacttcctcagccattcatgcagtaacatgcatttcatctgaaattttgcagtcaaatcagaagcttcatggcttaagagaggagttgaatgcaattgttccgtatttggaagaaatgaaaaagaaaaaggtcgaacgatggaaccagtttgttcatgtcatagagcagattaagaaaatttcgtctgaaataaggccagccgattttgttccctttaaagttccggttgatcagtctgacctgtcattaagaaagcttgatgagttgacgaaggacctggaatcccttcagaaggagaaggtcatcatcactaataccatctttatccattttcaccagtcatgttgtcatcgtgtctctatctatcaagaatccttttcatttcttgtataaaatctcactatgccatatacatgtttgtttctcacagagcgatcggctaaagcaagtgatagaacatttgaattctttgcattccttatgtgaggtgcttggcatagatttcaagcaaacagtatatgaggtgcaccctagcttggacgaagctgaaggatcaaagaacctgagcaacactacaattgagaggcttgctgctgccgcaaacagactgcgtgaaatgaagatccaaaggatgcaaaaggtcagcattgcctgtaccattgtagaggtatcaatgaacactttcagtctttaacttggttaatctgattctggcagcttcaagattttgcttctagcatgctcgagctatggaatctcatggatactccacttgaagagcagcagatgtttcagaatataacatgcaatattgctgcttcagaacaagagataactgaaccaaacaccctctccacagatttcctgaattatgtaatttatcatcactgagattgcaaaaatttatgttcgtactgtgttatatttttattaagatatgaatgttcatcgactatacttataactgtaggtcgaatctgaggtgttaaggcttgaacaactgaaagcaagtaagatgaaagatcttgttttaaaaaagaaagcagaactagaagagcatagaagacgtgctcatcttgttggcgaggaaggttatgcagaggagtttagcattgaagctattgaagctggtaagatactctcctgccttactgccttttattgtgcctgacaattgtcataccagacagagttcatatacctggtctgtgttctgttcgcaggagctattgatccctcactagtacttgaacaaattgaagctcacattgcaacagtgaaagaggaagcttttagccggaaggatattcttgagaaagttgaaagatggcaaaatgcttgtgaagaggaagcctggctggaagattacaacaaagtatggatgctagctgaagctacgtggtctttgtatatttgtttagcaaataatgtggtactgatatttcctggctttggctttttttaggatgataatcgttacaatgctgggaggggagcacatctaacactaaagagggctgaaaaggctcgtactttggtcaacaagattcctggtaatgttactcaatgatttatgtgtttggaacttccttatcaagtgcatatttaatttacaattttaactcttgccattactacaatctgatatcctgctgatttgtgctgagcaggaatggtagatgttttgagaacaaaaattgctgcatggaaaaatgaacgaggaaaggaggatttcacatatgatggtgtaggttttcttactcttacacattacattgatcgggtctatttttgtttcttgctgaagtgcctttcttgcaattcttacaggttagcctttcgtcaatgcttgatgaatatatgttcgttcgtcaggagaaagagcaagagaagaagagacaaagggtattatgctctcgcctaatattcatgtattgtctaaatcatcttttcaccttctgtgaatacgctctaatacttgaatatacctgcaggatcagaagaagctccaggatcagctcaaagcggagcaggaagctttgtacggatcaaaacccagtccatccaagcccctaagtacaaagaaggcacctaggcactctatgggtggtgcaaaccgaaggctatctcttggtggagccaccatgcaacccccgaagactgatatactgcattcaaagtctgttcgtgctgccaagaaaactgaagaaatcggcactttgtcccctagtaagccctactagctatcatgtgtcgatatatttctttttcctcttattttcacttgaacatatgtctaactcaagcaaacaatatcaggtagtagaggtttggacattgccggattgcctatcaagaagttgtctttcaatgccagtactctacgtgagacggagacacctcgtaaaccttttgctcagatcacaccaggaaacagtgtctcgtcgacgcctgtgcgccctatcaccaataacactgaggatgatgagaacaggactccgaagacatttacagcactgaatcccaagactccgatgactgttacggctccaatgcagatggcaatgactccctctctggccaacaaggtttcagcaactccagtttcccttgtttacgacaagccagaggtaacattgcaggaggacatcgactactcctttgaagaaaggcggctcgccatctatctggccaggcaaatggtttaactgttgatcaatttatgtacgtagttgaaatctgactgcattttcttgtcggtggccattgcgtatgttggtcaacaatagtcggcctttccagtagcactattctgatttactgcaattgttttaatgttttctacaaccagtaaaacagctctatacattagcttgctc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0685900, RefSeq:Os01g0685900