Os01g0686500

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Revision as of 04:54, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0686500| Description = Protein of unknown function DUF1618 domain containing protein| Version = NM_001050442.1 GI:115439254 GeneID:4324112| ...")
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Gene Name

Os01g0686500

Description

Protein of unknown function DUF1618 domain containing protein

Version

NM_001050442.1 GI:115439254 GeneID:4324112

Length

1816 bp

Definition

Oryza sativa Japonica Group Os01g0686500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:30075114..30076929

Sequence Coding Region

30075115..30075146,30075222..30076007,30076149..30076527

Expression

GEO Profiles:Os01g0686500

Genome Context

<gbrowseImage1> name=NC_008394:30075114..30076929 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:30075114..30076929 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tccacgcagatcccctctccccctctcacgccgtacgtgagggatgccgatctcgtcgacacgcagcgagatcccaggtgggcggccgtcaagtgcgcacgcaaggaggcctacggctgcggggagttcggtcaggagctggtggatggcctgacgctgtacgtgcgccgcaacgatggccccagcgacgatctcttctccgccctcgccgtccgtgccaccgacgagatgctgcggaaggtcgcggcgccaacgaagatccagaagagcctcatccgcccgctcttccgctgtcaggcaagtatgaatgcccgcgtcaccttcgtctgcgagttgcacgccgcggaggagaacctcgtcgtcctctccgcgtccttcgaccacgcccaccacatctactacctcgtctacgacggcatcgacgagtcactcaccatgatcccgagcctgtcaccgcaccgcttcgtggccttccacccgcggcctgtcctaaggcgccgcgccactgggggctatgacctggccctcatagcgaggtacctcagcaggaagagcagagaagacggggacgttctccttctgtttaccaaggagaaggagagttcctgctgctccgatcagtggatggagaagaagaagggtatgcgcctcccaacggggcccctgggcttcttctgcccggacatgatcttctcgttcaagggcaacactttctgggtcgatctctcacagggtttcatgtgctgcgacaccaatgtcctcttctctggcgacaccgtggatttcagacacctcagcttcccccaccagtacctgcttcatgacgccactgcattagccaacacaacagtggccgtgtggacactggaccaaggtggcctgtgctggaaaaaggatgtggagttcaggctggggaacatatggtcgcaacgggactacaagcagtctgggttgcccaggatggtacccgtgtggcccttcctaaggccgcacgcacatggcacactctacttcctggtgccgaaaccgatgaccggacctagtgacccccaaatgtatcacatttgcgggctcgacatgtgcaccaagaaaatccagttgtcgcagtactccgtccgctccaatatcctccggccggctgccttccctaccaatgcattccaacaccttgatgagtccccactagctacaaagtaa</cdnaseq>

Protein Sequence

<aaseq>STQIPSPPLTPYVRDADLVDTQRDPRWAAVKCARKEAYGCGEFG QELVDGLTLYVRRNDGPSDDLFSALAVRATDEMLRKVAAPTKIQKSLIRPLFRCQASM NARVTFVCELHAAEENLVVLSASFDHAHHIYYLVYDGIDESLTMIPSLSPHRFVAFHP RPVLRRRATGGYDLALIARYLSRKSREDGDVLLLFTKEKESSCCSDQWMEKKKGMRLP TGPLGFFCPDMIFSFKGNTFWVDLSQGFMCCDTNVLFSGDTVDFRHLSFPHQYLLHDA TALANTTVAVWTLDQGGLCWKKDVEFRLGNIWSQRDYKQSGLPRMVPVWPFLRPHAHG TLYFLVPKPMTGPSDPQMYHICGLDMCTKKIQLSQYSVRSNILRPAAFPTNAFQHLDE SPLATK</aaseq>

Gene Sequence

<dnaseqindica>2..33#109..894#1036..1414#atccacgcagatcccctctccccctctcacgccgtacgttcaccaccaccttttgatccatctcatggcgtcggttccggatttgaatccgtgggtcgtgctggacaggtacgtgagggatgccgatctcgtcgacacgcagcgagatcccaggtgggcggccgtcaagtgcgcacgcaaggaggcctacggctgcggggagttcggtcaggagctggtggatggcctgacgctgtacgtgcgccgcaacgatggccccagcgacgatctcttctccgccctcgccgtccgtgccaccgacgagatgctgcggaaggtcgcggcgccaacgaagatccagaagagcctcatccgcccgctcttccgctgtcaggcaagtatgaatgcccgcgtcaccttcgtctgcgagttgcacgccgcggaggagaacctcgtcgtcctctccgcgtccttcgaccacgcccaccacatctactacctcgtctacgacggcatcgacgagtcactcaccatgatcccgagcctgtcaccgcaccgcttcgtggccttccacccgcggcctgtcctaaggcgccgcgccactgggggctatgacctggccctcatagcgaggtacctcagcaggaagagcagagaagacggggacgttctccttctgtttaccaaggagaaggagagttcctgctgctccgatcagtggatggagaagaagaagggtatgcgcctcccaacggggcccctgggcttcttctgcccggacatgatcttctcgttcaagggcaacactttctgggtcgatctctcacagggtttcatgtgctgcgacaccaatgtcctcttctctggcgacaccgtggatttcagacacctcagcttcccccaccagtacctgcttcatgacattatcaaatcccaggagcttggcccgatggagatgtaccggaccatgggcgtctccgggggctccatcaagttcgtctctatcaacactccggctactgatgccgcggcaggcaaaccgccgggcaggccctgtcatgacgccactgcattagccaacacaacagtggccgtgtggacactggaccaaggtggcctgtgctggaaaaaggatgtggagttcaggctggggaacatatggtcgcaacgggactacaagcagtctgggttgcccaggatggtacccgtgtggcccttcctaaggccgcacgcacatggcacactctacttcctggtgccgaaaccgatgaccggacctagtgacccccaaatgtatcacatttgcgggctcgacatgtgcaccaagaaaatccagttgtcgcagtactccgtccgctccaatatcctccggccggctgccttccctaccaatgcattccaacaccttgatgagtccccactagctacaaagtaattctactgtaaggactgctacatcatttgaattgtaaaatttgtactttgctttttcttgtggatcacacacggcacgcctcgtcttgtttatatcactgaaaaatatctagcagggttaccatctaagttctatgatgtttttgtctggcaggattgcttgagttaactggaggcagggaatgttcatcaaggcagtgcggagttgggattctatatgcaaggttgcttattactttctaggtatcgtgttttgggtcgaaggcacttcccaactcgtaatttatcgtcactctatatagcctaggaccctattgatgcacttgcgaaactgattatgtgcttccttattgattctgtatccgtgcgacgaactaatctagctacttgttatattattatc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0686500, RefSeq:Os01g0686500