Os01g0688800

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Revision as of 04:54, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0688800| Description = Conserved hypothetical protein| Version = NM_001050455.1 GI:115439280 GeneID:4327942| Length = 2144 bp| Definition ...")
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Gene Name

Os01g0688800

Description

Conserved hypothetical protein

Version

NM_001050455.1 GI:115439280 GeneID:4327942

Length

2144 bp

Definition

Oryza sativa Japonica Group Os01g0688800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:30178868..30181011

Sequence Coding Region

30178868..30178991,30179076..30179308,30180092..30180406,30180493..30181011

Expression

GEO Profiles:Os01g0688800

Genome Context

<gbrowseImage1> name=NC_008394:30178868..30181011 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:30178868..30181011 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggccgtagattttgatcttcggtttacttatgtcctggctggttgggaggggacagcacatgatgctgtagttttaagagatgctttggaacgtgaaaatggcattcatgtcccacaaggaaaattctatctagttgatgctggatatggagccaaacaaggattcttgcctccttttcgtgctgtccggtaccacttgaaagagtgggggaataatccggtgcaaaatgaggagttgttcaaccttagacactcatccctccgtataacggttgaacgtgcatttgggtcactaaagaggaggttcaaagttctagatgatgccactccattcttcccatttcgaactcaagtaggaaatggacaacaacagtggcaagggaggtcagctatgtcctctttcatgctttctcacctagctaatattgttgctggtggcacaaggacctcatctggtttcaaggcagtccatctcaatgcatgtgctagggcggtcaataaaaggttcaatagtactctcacgggtgagcaaattaagaaccatttgaagacatggcaaagaaagttctcgaagataaataggcttaggaaagtgagtgctgctggttgggatgagaaaaacttcattattactctcgatgatgagcactataacggttatattgaggatcacaaggctgatgcggattattttaacaaacctcttgcacactatggtgagatgcttacaatatttggtagcaccatggctacagaaaagtatgcaaaggactcaagttcagtcctaggaacagaggatgtccaagatgacaatgatgaagaaaatgatggtcctgccactactgatgatcgtgcggaggcatcatctgcaagtaagccaaagaaagcaaaaacacaagagaatgaagatggtgggctgattggtgcattcactagtgttggtgacaagcttgcctatgctatactaaaggtcgccgagccggacaataagcttccagaaggtttatttgacacattgaaaacccttcctggttttgaggaggtccatagatcattttactatgctcatttggttgccaaccctcacattgctagagctttcgatagacttccatttgaaaacaagattggtttgctatgttcattagtgaaaagttccctggatcaacataggcttcttggatga</cdnaseq>

Protein Sequence

<aaseq>MAAVDFDLRFTYVLAGWEGTAHDAVVLRDALERENGIHVPQGKF YLVDAGYGAKQGFLPPFRAVRYHLKEWGNNPVQNEELFNLRHSSLRITVERAFGSLKR RFKVLDDATPFFPFRTQVGNGQQQWQGRSAMSSFMLSHLANIVAGGTRTSSGFKAVHL NACARAVNKRFNSTLTGEQIKNHLKTWQRKFSKINRLRKVSAAGWDEKNFIITLDDEH YNGYIEDHKADADYFNKPLAHYGEMLTIFGSTMATEKYAKDSSSVLGTEDVQDDNDEE NDGPATTDDRAEASSASKPKKAKTQENEDGGLIGAFTSVGDKLAYAILKVAEPDNKLP EGLFDTLKTLPGFEEVHRSFYYAHLVANPHIARAFDRLPFENKIGLLCSLVKSSLDQH RLLG</aaseq>

Gene Sequence

<dnaseqindica>1..124#209..441#1225..1539#1626..2144#atggcggccgtagattttgatcttcggtttacttatgtcctggctggttgggaggggacagcacatgatgctgtagttttaagagatgctttggaacgtgaaaatggcattcatgtcccacaaggtaatagattactatagtttatcaaattctccatgacaaatgttgatatttaggaatgtgaccaacttatcgatcatatgataggaaaattctatctagttgatgctggatatggagccaaacaaggattcttgcctccttttcgtgctgtccggtaccacttgaaagagtgggggaataatccggtgcaaaatgaggagttgttcaaccttagacactcatccctccgtataacggttgaacgtgcatttgggtcactaaagaggaggttcaaagttctagatgatgccactccattcttcccatttcgaactcaagtagatattgttgtagcttgttgtattattcataactgggtcataaatgacggaattgatgagcttgtagctccgtctgattggtcaagtgaggacattgatgaatcgtcaaccggccaagcgaatgaacatgcattgatggttcagttcaggcagggtttagctgatcagatgtgggctgaccgtaataaccatcatggagtgtaatatgtagctatgcaacttgtatttctaccttatttgctacatttcatttgtattatgaacttctttatttatttatttcgtgtggacagcttgttatagtccatttgccaaatctcagttgtatggataaatgtattgttgtatgctgaatttttggtttgatgaattgatgaatgttgaatttttgggttaatatgttgctggatgctaatattctgggttgatatgttggtgaatggtaatttttttgggttgatatattgctgaatggtcattttctgggatgatgtgttggtgaatggtaattttttgggttgatatattgctgaatgctcatattcccggttgatatgttggtgaatggtaattttttgggttgatatgttgctgaatgatcattttctgggttgatatgttggtgaatggtaattttttgggttgatatgttgctgaattctcattttttttattagatatattgctgaatggttattttctgagttcatatattgttgcatgcatattttattgatatatatattactgaatggacatttttgttttattttatgataggtaggaaatggacaacaacagtggcaagggaggtcagctatgtcctctttcatgctttctcacctagctaatattgttgctggtggcacaaggacctcatctggtttcaaggcagtccatctcaatgcatgtgctagggcggtcaataaaaggttcaatagtactctcacgggtgagcaaattaagaaccatttgaagacatggcaaagaaagttctcgaagataaataggcttaggaaagtgagtgctgctggttgggatgagaaaaacttcattattactctcgatgatgagcactataacggttatattgaggtatatgtcttattttctgggttctttgctttatttttataactttttattgcatttgcttatacattaacttttgtttcatgaaggatcacaaggctgatgcggattattttaacaaacctcttgcacactatggtgagatgcttacaatatttggtagcaccatggctacagaaaagtatgcaaaggactcaagttcagtcctaggaacagaggatgtccaagatgacaatgatgaagaaaatgatggtcctgccactactgatgatcgtgcggaggcatcatctgcaagtaagccaaagaaagcaaaaacacaagagaatgaagatggtgggctgattggtgcattcactagtgttggtgacaagcttgcctatgctatactaaaggtcgccgagccggacaataagcttccagaaggtttatttgacacattgaaaacccttcctggttttgaggaggtccatagatcattttactatgctcatttggttgccaaccctcacattgctagagctttcgatagacttccatttgaaaacaagattggtttgctatgttcattagtgaaaagttccctggatcaacataggcttcttggatga</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0688800, RefSeq:Os01g0688800