Os01g0689800

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Revision as of 04:54, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0689800| Description = Esterase/lipase/thioesterase domain containing protein| Version = NM_001050459.1 GI:115439288 GeneID:4327946| Length...")
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Gene Name

Os01g0689800

Description

Esterase/lipase/thioesterase domain containing protein

Version

NM_001050459.1 GI:115439288 GeneID:4327946

Length

3525 bp

Definition

Oryza sativa Japonica Group Os01g0689800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:30235123..30238647

Sequence Coding Region

30235268..30235641,30237022..30237058,30237166..30237402,30237479..30237526,30237851..30238249

Expression

GEO Profiles:Os01g0689800

Genome Context

<gbrowseImage1> name=NC_008394:30235123..30238647 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:30235123..30238647 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcggcgtcacgtccaccatcgccgcgcgcttcgccttcttcccgcccacgccgccgtcctacaccgtcgtcgccgacgccgccacgggccgcctcgccatccccgagatctcccgcccgcccgcgcgccgccggcggagggacggcggcggggacgcctcggcgtcgggcgccgcacccgccgaggacgaggacggcacggaggtggtgcgcctccgcacgcggcgcgggaacgagatcgtcggggtgcacgtgcgccacgagcgggcctccgccacgctgctctactcccacggcaacgccgcggacctcggccagatgtacggcctcttcgtcgagctcagccgccgcctccgcatcaatctctttgggtatgattattctggatatgggcggtctacagggaagcccactgagtgtaatacatatgcagacattgaagcagcatataactgcctcaaggaaaaatatggtgtcgcagatgaggatataatcttgtatggtcagtctgttgggagtggtccaaccattgatcttgcttctcgtttgccaaatttgcgaggtgtggttttgcacagtcccattttatctggactaagagtactatatcctgtcaaaaggacgtattggtttgacatttataagaatattgacaaaattggcctggtaaattgcccagtgctcgtaattcatggtacatcagatgatgtcgttgactgttcccatggaaagcagctgtgggaactttgcaaagtaaaatattcaccgttgtggctaactggtggtggccactgcaatcttgagctttatcctgattatatcaagcacttgaagaagtttgtgtcaagtcttggcaaaaaatcatcaaaacctgatcttaaagagataacgatgaaggagggtgcttctagtaaagattcagaacctgcaagctctgagaaaccccaagaagctccaaagtgctcccagatctcacgaaagagcttagatagtcgagttgggaaatcaaaaactgtggatgttcctgaaaagccacgaatgagctcagatgatgtcgacaagttcaggaggagaagatgtttggtctggtga</cdnaseq>

Protein Sequence

<aaseq>MGGVTSTIAARFAFFPPTPPSYTVVADAATGRLAIPEISRPPAR RRRRDGGGDASASGAAPAEDEDGTEVVRLRTRRGNEIVGVHVRHERASATLLYSHGNA ADLGQMYGLFVELSRRLRINLFGYDYSGYGRSTGKPTECNTYADIEAAYNCLKEKYGV ADEDIILYGQSVGSGPTIDLASRLPNLRGVVLHSPILSGLRVLYPVKRTYWFDIYKNI DKIGLVNCPVLVIHGTSDDVVDCSHGKQLWELCKVKYSPLWLTGGGHCNLELYPDYIK HLKKFVSSLGKKSSKPDLKEITMKEGASSKDSEPASSEKPQEAPKCSQISRKSLDSRV GKSKTVDVPEKPRMSSDDVDKFRRRRCLVW</aaseq>

Gene Sequence

<dnaseqindica>146..519#1900..1936#2044..2280#2357..2404#2729..3127#gtgtgtgttgtctgtgcgtgagctcccacctccttcccttccccctccccaccaaacccctctccgatccaagccttccttcccccctctctctctctctccctcgcatgccggcgcgctcgccgaggcggcggcgctgctgaccatgggcggcgtcacgtccaccatcgccgcgcgcttcgccttcttcccgcccacgccgccgtcctacaccgtcgtcgccgacgccgccacgggccgcctcgccatccccgagatctcccgcccgcccgcgcgccgccggcggagggacggcggcggggacgcctcggcgtcgggcgccgcacccgccgaggacgaggacggcacggaggtggtgcgcctccgcacgcggcgcgggaacgagatcgtcggggtgcacgtgcgccacgagcgggcctccgccacgctgctctactcccacggcaacgccgcggacctcggccagatgtacggcctcttcgtcgagctcagccgccgcctccgcatcaatctctttgggtaaccccctctcttcgtcttctcgcttcagctcgtttgctttgctagttttaagctggatttggcccgggagctatgcggtttccattaggggaaactaacttggagttgtttcggaaagaggcgtgctagcgatgtgttagtcatttggtgcgcatttattatttagatttgttgttcctatatctttgattggttgttataactatgctaagccatgggtttcacactgatctctggacctagttaacggaaattgcccctgtgacacatggatcaatctgaaatgtttggatcacacacaaatggacatgacatttagaggccgatgaaattgggaaattcagttgtatttagtagaggcagttagctgcatttgtcttccctccaatgttagttgctctacttgtcaccagtttaccactatacatataaaatcgcagccaaggcgaattaactcttttctactgcagctttctgccaaactgcccccaatgactacctgatctttttattattactgttataaggagataatactaatttagtgcaaatttggagctggagacttgagattttggagtcacaacttgtattgtttaaagataataaaaaggttagggacctaagcttagtgaagtagttggcaaggtgcaagagattgtgaacacctagcaggaaatgcagagtttcttctttccttttttcagttttaattataccagaatatctattagttctaccctaagaacatggtctgttgtattgtaccggtgtaccctacattgtgactttgccaagaaagcaagataatgtattttgtggtggtagcttggattttacacaagaaacctttttgatgatgagatggtgtgttgtatttcgaggcataattagtggggctgtctggtggatcacctatagtggttgccttgtgcagagagatgggcatcatatattttttttggattccaatttccaagagggaaaccctcacaaccacccaacataattcccactctatctgtttggaaagtgcagattgaccgttgattctgtcacagatttcctttcatgatcataaaatgaaaactattctatagtgttcttttttagactggaactaatcttgttattgcagattgattgcaaagcaccacaaatcctcttagtcaaaaactctaggaaaatttgatgtactgcattctcatgtagtataaaattatatcctgtcatagtattcaatctctttcaattgcagaataggcctttgtagattggtgcttgctttattatcaaacataacacactaaatagagtaaaaaataggagaatgcgattttctgagcatcattttaacagacaccatatgttcaacaggtatgattattctggatatgggcggtctacagggaaggtatccttcagttcttatttgttggttgcttcaattttagcttaagtagcaaagctaatcttatgcctaacacatcttaatggacagtttattcttccattgaacagcccactgagtgtaatacatatgcagacattgaagcagcatataactgcctcaaggaaaaatatggtgtcgcagatgaggatataatcttgtatggtcagtctgttgggagtggtccaaccattgatcttgcttctcgtttgccaaatttgcgaggtgtggttttgcacagtcccattttatctggactaagagtactatatcctgtcaaaaggacgtattggtttgacatttataaggtaaacttgatttcttttcacctctccctggaattcttgtttctgaatgctgatatactttccctccatgttgtagaatattgacaaaattggcctggtaaattgcccagtgctcgtaattcatgtaagtccaattgttttactgttattttcattcccactagttgctagttacttcatatgtaataaattactctagtgcgtagagaacctgaagatagattattcctctttgaatttgttgtgaaatagaagattcgtgcctaaatactcgacgagccaattatggtaattagacacaatgaaaaaaaaagaacaatctagaaacacagttatgaaggctaactgacgttctgttattgagtgctgtcatttatcgtcagaattgccatcttagaatttaggtgctcttgttgtcgtaactgaacaattctaatgcttacatcagggtacatcagatgatgtcgttgactgttcccatggaaagcagctgtgggaactttgcaaagtaaaatattcaccgttgtggctaactggtggtggccactgcaatcttgagctttatcctgattatatcaagcacttgaagaagtttgtgtcaagtcttggcaaaaaatcatcaaaacctgatcttaaagagataacgatgaaggagggtgcttctagtaaagattcagaacctgcaagctctgagaaaccccaagaagctccaaagtgctcccagatctcacgaaagagcttagatagtcgagttgggaaatcaaaaactgtggatgttcctgaaaagccacgaatgagctcagatgatgtcgacaagttcaggaggagaagatgtttggtctggtgatatatgatgtgatcctctgcgcggttcatgtagcagtagctgaatacaatagcatgaaaatcgagcaactgtattacatcgtatagcgaggaacataccagcagttcaagcagttcttatgccttacgggaccggaatatgagctgttaaataagggagaaggatcagtatgctgctggagtaaattatcatatatccatcaatgaactgaatctcaacaatggtaacatcatgggtaaattaacacgtacgccatcatcctgttttgcaacgccagtaggatttccatcatgtaaaagtgtaccattattgtctgtaatcatgagggacaaaaaactgaaaatttgctgccgctttgtgcacagtctaaagccttgacacaaggagcaagatattcc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0689800, RefSeq:Os01g0689800