Os10g0500600

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Revision as of 08:44, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0500600| Description = Conserved hypothetical protein| Version = NM_001071516.1 GI:115482775 GeneID:4349033| Length = 2969 bp| Definition ...")
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Gene Name

Os10g0500600

Description

Conserved hypothetical protein

Version

NM_001071516.1 GI:115482775 GeneID:4349033

Length

2969 bp

Definition

Oryza sativa Japonica Group Os10g0500600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:19549876..19552844

Sequence Coding Region

19550495..19551640,19551970..19552266

Expression

GEO Profiles:Os10g0500600

Genome Context

<gbrowseImage1> name=NC_008403:19549876..19552844 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:19549876..19552844 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtggggaaggaattggtggtgagaaagaacggccccgtggacatccgcgagattgccgccaaggcgacgctgagggaggtccggcagaatgggcacacctacgttgagctccgccgtgtcggcaagcgcgtcatcttcttctgcaccatctgcctcaccgagtgcttcagcgacaccgtgctgtttgatcacctgaaggggaacctgcactcccggcgctacgcggaggctaaggtcacgctgttcgggcccatgccatggccgttcaacgacggcgtgctcttcttcaacaactcgcgcgagaaggacccgctcttgctggactcgagctcgcagaacaccagagagctggctctggttccagccaacgacactgaagtgacttcgaggttgagagatgattctagctctcgcaatggcgcaaaaggcacacgccgtggtgcaaatgcgcatggtaatggtagaactgcttctgtatctgaagatcatgtgctgtcaaaccaaagtggaactgacggtcctctcgttattcctagtgtattgctaaaggatgttgtttcggatttgcctgtgcatcttttgggatatggaaatattgcatacaggttatgggaagctagcaaaggaagtaaaaagattagcaagatctggtgtgcttgggtaggacaggatggctcccatggcttggatgagtgtgacacctatgagcaatctgactttgccattgtcaacttctcttatacaattgagttgggcaggaagtggtcttctgatgatcaggaccttcctatctctgctggatctttcttcgtgattgatgatgctggacaccgtggaaagagaagaaagaagtcattttcagatcaagaagcatcttcagaggagtcgaatgagcaaagcagctccgcccatgacaatagccaagctatcataacaggttccccgacaggtacttcacacaatcttcaagttggcctcttatccaccaaatctatgaggagggagttgcgtaagcagaagcgccttgctgctgagaaagcttgtgatatttgtgggcgaccaatgcttcttgaaaaggatgtagctaccttgctcaactgcaagacaggaaatctagcctgcagcagtagaaactcaagcggggcatttcatttgtttcacacttcttgccttgtgcactggactattttatgccaatatgagatgctagcagacaaaattgcaagcaagggaaaaagcaatcgaggaagaaaggcaaaaaatgcacctaagaaaataacatccatcctttgcccagaatgccagggtactggaatccatgttgagggagatgaactggaaaaaccaaccatttctttatctgaggttcagacttcagagtgctattcttcgctgctacttttctttaactggacctgcttcaattatttgttgtgttaa</cdnaseq>

Protein Sequence

<aaseq>MVGKELVVRKNGPVDIREIAAKATLREVRQNGHTYVELRRVGKR VIFFCTICLTECFSDTVLFDHLKGNLHSRRYAEAKVTLFGPMPWPFNDGVLFFNNSRE KDPLLLDSSSQNTRELALVPANDTEVTSRLRDDSSSRNGAKGTRRGANAHGNGRTASV SEDHVLSNQSGTDGPLVIPSVLLKDVVSDLPVHLLGYGNIAYRLWEASKGSKKISKIW CAWVGQDGSHGLDECDTYEQSDFAIVNFSYTIELGRKWSSDDQDLPISAGSFFVIDDA GHRGKRRKKSFSDQEASSEESNEQSSSAHDNSQAIITGSPTGTSHNLQVGLLSTKSMR RELRKQKRLAAEKACDICGRPMLLEKDVATLLNCKTGNLACSSRNSSGAFHLFHTSCL VHWTILCQYEMLADKIASKGKSNRGRKAKNAPKKITSILCPECQGTGIHVEGDELEKP TISLSEVQTSECYSSLLLFFNWTCFNYLLC</aaseq>

Gene Sequence

<dnaseqindica>620..1765#2095..2391#attcaccttcatctcaccttcccttctctccacgcatctcctctctcctctcctctcctctcctctccccggcgaagccaccgccgaccatctcccgccgcctccccaccccaccccacgcgcgcccgcgccccggcgagcactcccggaggcgcgccgagggtggcctcctcctcttcctcctcctcctcttcctcttcccgacctccccctcctcgcgcgcatggccggcggcgagagaacgctcggagcgacgacgcggccgcgcccctcccgacgccccccgtcgcctcccggctcgaattgaaggtattcgttagccgtctctctcttccctccccgctccgcatcgtgacccccccggcgtggtggtggcagccccagcggtgggggtgtagattagggatccgttcgaatttaggttgagtaaatttccctccaattaacgctggaatttcttcctctttttttttttgatgcgtggtgcagtgctaacagcaagcagtttggtttgaaagcaaatttgggggattattatttttttggtgggaaatttgagtagggatctgtaatagcggaaaaaggaggagcttcggtggtgaattgagggggtttctccatggtggggaaggaattggtggtgagaaagaacggccccgtggacatccgcgagattgccgccaaggcgacgctgagggaggtccggcagaatgggcacacctacgttgagctccgccgtgtcggcaagcgcgtcatcttcttctgcaccatctgcctcaccgagtgcttcagcgacaccgtgctgtttgatcacctgaaggggaacctgcactcccggcgctacgcggaggctaaggtcacgctgttcgggcccatgccatggccgttcaacgacggcgtgctcttcttcaacaactcgcgcgagaaggacccgctcttgctggactcgagctcgcagaacaccagagagctggctctggttccagccaacgacactgaagtgacttcgaggttgagagatgattctagctctcgcaatggcgcaaaaggcacacgccgtggtgcaaatgcgcatggtaatggtagaactgcttctgtatctgaagatcatgtgctgtcaaaccaaagtggaactgacggtcctctcgttattcctagtgtattgctaaaggatgttgtttcggatttgcctgtgcatcttttgggatatggaaatattgcatacaggttatgggaagctagcaaaggaagtaaaaagattagcaagatctggtgtgcttgggtaggacaggatggctcccatggcttggatgagtgtgacacctatgagcaatctgactttgccattgtcaacttctcttatacaattgagttgggcaggaagtggtcttctgatgatcaggaccttcctatctctgctggatctttcttcgtgattgatgatgctggacaccgtggaaagagaagaaagaagtcattttcagatcaagaagcatcttcagaggagtcgaatgagcaaagcagctccgcccatgacaatagccaagctatcataacaggttccccgacaggtacttcacacaatcttcaagttggcctcttatccaccaaatctatgaggagggagttgcgtaagcagaagcgccttgctgctgagaaagcttgtgatatttgtgggcgaccaatgcttcttgaaaaggatgtagctaccttgctcaactgcaagacaggaaatctagcctgcagcagtagaaactcaagcggggtaagttatttcaaacattctttgcctttgcagtttcttagtatttcttgaagatagcaacgcatgacatgcttagcatttctcacagataaataaattaaagcaaacctaaaaaattaggcatttgactaatttccattcattagttatggtaacttcttcactgttgtaatggaattacagttctcacaaaccagggattccaaaccgtataatgcaaagtggttgaattcatttcaagcaaaacatagacagtgtatagtttcttctttaaaaatttgtagtattctgctgcaacctccaatgactttgtacggctaattttgcaggcatttcatttgtttcacacttcttgccttgtgcactggactattttatgccaatatgagatgctagcagacaaaattgcaagcaagggaaaaagcaatcgaggaagaaaggcaaaaaatgcacctaagaaaataacatccatcctttgcccagaatgccagggtactggaatccatgttgagggagatgaactggaaaaaccaaccatttctttatctgaggttcagacttcagagtgctattcttcgctgctacttttctttaactggacctgcttcaattatttgttgtgttaagtaattgtcgacatccttaattttagatccgtatcgcagatgtttcgctataagctgaaagccattgaagcacacaaagcatggatgaagagccctgaggtgcttgagaactgttccactggacttcatttccctgcagagcaaatagagaactctgaggtagcttcataggctagcataattaatacccattttgttttggattaaacgcgtgattgatcgaaccaacttttttgcaggagcaggtgattccactgaagtcggttgctttctatgcagctgacgggtgagatgtcctgctaaggccatggaccgtgcctcgtcgctgccagaaacgagagggattctgccagggacgttgtaaatttactagagcagctgtaaataagcttgcttgacgatactgttagagatgctgacagtgtagttcgcttcggtttagcctgtaattgcgttgtacctatgttaacctgtctgtcctgagatacaatgacagccagtagatggaactccagcagaactgtataaagactgggtgttgtaaccgtatatgtactgtccgtatgctttgttaaaac</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0500600, RefSeq:Os10g0500600