Os01g0692700

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Revision as of 04:54, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0692700| Description = Zinc finger, RING-type domain containing protein| Version = NM_001185585.1 GI:297720304 GeneID:9269271| Length = 334...")
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Gene Name

Os01g0692700

Description

Zinc finger, RING-type domain containing protein

Version

NM_001185585.1 GI:297720304 GeneID:9269271

Length

3349 bp

Definition

Oryza sativa Japonica Group Os01g0692700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:30338997..30342345

Sequence Coding Region

30339156..30339287,30339397..30339549,30339624..30339719,30341450..30341626,30342221..30342268

Expression

GEO Profiles:Os01g0692700

Genome Context

<gbrowseImage1> name=NC_008394:30338997..30342345 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:30338997..30342345 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtggggagaggccgtggcggcgacgcggagaggccgcacagagagagaccgtgcctgtccaggagggtgaccgtgcaggagcagatatcgtcgtcgttcatggactcgccgccgccgccgcacctcgacgtcgcgcccttcttcggcgccgacctcctcccctccggccgcctccgccggatgcgcgggtaccgccactcccccgtcggcctcgaggaagagatcatgatgtttcagacaagagttctgttgggaggaatgagcatgtatgatcggtaccaggattggcgccttgatgttgataacatgacatacgaggagttgcttgagcttggagataaaataggttatgtcaacactggattgcgtgaggatgagatagttcgcaaccttaggaaggtcaaacacccagcctttgactcctcgttccggtattcaacagaaatggaaaagaaatgcagtatttgtcaagaagagtttgaagccaatgaagagatggggaggctggattgcggccacagctaccatgtttactgcattaagcaatggctttctcagaagaacgtttgcccagtttgcaagactgccgttaccaagacttga</cdnaseq>

Protein Sequence

<aaseq>MVGRGRGGDAERPHRERPCLSRRVTVQEQISSSFMDSPPPPHLD VAPFFGADLLPSGRLRRMRGYRHSPVGLEEEIMMFQTRVLLGGMSMYDRYQDWRLDVD NMTYEELLELGDKIGYVNTGLREDEIVRNLRKVKHPAFDSSFRYSTEMEKKCSICQEE FEANEEMGRLDCGHSYHVYCIKQWLSQKNVCPVCKTAVTKT</aaseq>

Gene Sequence

<dnaseqindica>3059..3190#2797..2949#2627..2722#720..896#78..125#ccgacgtgtggtgcgcgcctgggataccgttcgccgcggaggcgtcgtccgtggactgcgtggtggcgcggcaccagatggtggggagaggccgtggcggcgacgcggagaggccgcacagagaggttcgtcgcttgcgtgcgtggatggatggatgccgttgatccttcgcttctacttgttgatttcgcctcatgttcggatctgttcgtgctcttggaaccgattggttttgcttgttctttgctttccggtgggtggtcgatcgattcggagttttcgtctctcatttacttgtgtttctttgtgccttttcttccactcctttttgtctgttggcgaaaaaagatttaaattcaacattcaatactctgttctttttttccgttcttctgttgctgttttcctcccacaatcaattctggcggctttaaaaaaaccgtagcatttgccactgttctaccacttgtatagtcctgagttcctgacgaaccaattaaagccagtctttaatgtcgtgtttggtcagtctaattaagttcttgttatctaaacatgtgacatgtatctcttctgggcgtactgaattcccctgtaccgatgcgcgctgtgcgcgagcggaatctttgccatgtttctctgaaattctctctccctcctcaccaagttgatgatgatctcacccgctacgctttttttttttttttgcctttgcgcagagaccgtgcctgtccaggagggtgaccgtgcaggagcagatatcgtcgtcgttcatggactcgccgccgccgccgcacctcgacgtcgcgcccttcttcggcgccgacctcctcccctccggccgcctccgccggatgcgcgggtaccgccactcccccgtcggcctcgaggaagaggtaaaaaacgtcacaggctcacggtagtagcagcagtactagtactggcacagtagcgcacactgcaacaaacgttcgttcgtttcctcgttgcccccacactgcattttgcttgcttgcacacttgtcctgagccaccgcattgcatgcatcggtagatacatttttccaacgtactcctaagtcggagatggacacggcccgcaacaagtgcgcatgctgacagcggttggtggtgcgacacgctgcctgcctgcataagattcccgtgcgtagggtagtttagcgcgtgatctgacatgcgtattaagcagctgtaacgcgtgatatagattaatagtagtagtattagaagtggagtagattgattgtctggtggtgcgcgagtgaacctggggggtggccggctggccgggtgggcgttggaagtggttgacttgcatctttcgtgcgctaaacgtgacgtgagatcgtggccttcttggaggttaactaatcggcagccttacacaggcgcgcacaataattgtataagcggttgcagttgcaagccatggcacctgcattatgcgcgctggttagcgtagtggccgtacactcgtttaggattaatgcggctgagaagggagggaacgagacagtgggatgtggccacagctttggaaagagacctctcaaccatggtcatacacttccatgaatgcttctcgttgtgtgtatacaccgtgccaactacaagtataaatgctggatactcttgctgagctgatcagaaatgttgccggtaatggtcaattgttgtctcaacggtgctagtatttcaggatgcgggcaaggagtgctggagcacacctgggaatgccaagcaatagtatggtttattctatctactgtcatgctgttctgtggtggatcgtacggttggtaggaatgggcatgctggtatggtgcgtgaatgattggttgcctccgatggcagatcgagagtcctagcagttcaccatttatgattagtgctcggctgtgctgcttgactgaactattcttttggtgcttaagggggaccaacgctccttatcatgttcctgttgcttcagtcataatcagatctagagttgtagtcattccttctggtccttctggatttcatgtgggcatgtgattggtgatgactccttaataatagctcaacatcaagatccacaaggattgtcggtcccgcactgccattgcctatcaagatatatatttgaggggatttgctttaatgtgctttggtgcctagttcagggaagtccatttccttacctataaacattttttctatctagttttacttctgtgctatacctctgttttctgacttaggttttccactgtcataagaattcatatttgattttggtgcacattccaaacagtcgtaaagaaagctactatatatttatctggtgcttcaatctaacctttctatgtaatcgtaaagaatataagagatacgtcagtgcagctgtagaagcatatttagctgcacactttgtactctacttggaagaataaccagcccgatggtcagtgattgagggttaacttgtgctaagcggtgcagttgttaatctgtgatcttcctggcagacatatacataattatgcatgttgctagctcaataagcagccttatcaaaggtagcgagttcaaatacttaatgaaactgtttttgatatggcagatcatgatgtttcagacaagagttctgttgggaggaatgagcatgtatgatcggtaccaggattggcgccttgatgttgataacatgacatacgaggtttgtctctttgccttgtagcatcacttttcaccaccaccaccaccatcatcatcaattgcttcgttttacaggagttgcttgagcttggagataaaataggttatgtcaacactggattgcgtgaggatgagatagttcgcaaccttaggaaggtcaaacacccagcctttgactcctcgttccggtattcaacagaaatggaaaagaaatgcagtatttgtcaagtatgccacaacctcttctcttgagttatcttcttcccttcagtcattatacagggtatccagtgtctggcatgtgaacaaacttcattctcatgtcaatgtgttgcaggaagagtttgaagccaatgaagagatggggaggctggattgcggccacagctaccatgtttactgcattaagcaatggctttctcagaagaacgtttgcccagtttgcaagactgccgttaccaagacttgaagtccggactccgggcaacgacgattgtatacctgggtcaaactttcaaaacatgtttgtttgtgctctgtacagtcaattacatatgttattgtataaacacatcatccattcttttgcatttgcagatagaaatgccatattgaggcatcctttatc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0692700, RefSeq:Os01g0692700