Os01g0695300

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Revision as of 04:55, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0695300| Description = Similar to Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS) (Farnesyl diphosphate synthetase) [Includes: Dimet...")
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Gene Name

Os01g0695300

Description

Similar to Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS) (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1)

Version

NM_001050494.1 GI:115439358 GeneID:4323892

Length

2853 bp

Definition

Oryza sativa Japonica Group Os01g0695300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:30508017..30510869

Sequence Coding Region

30508169..30508297,30508631..30508702,30508783..30508872,30508961..30509005,30509111..30509206
,30509617..30509668,30509805..30509893,30509974..30510090,30510432..30510518
,30510616..30510737,30510845..30510869

Expression

GEO Profiles:Os01g0695300

Genome Context

<gbrowseImage1> name=NC_008394:30508017..30510869 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:30508017..30510869 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctggactacaacgtgcttggtggaaaattgaaccgtggcttggctgttgttgagagctacaaaatactgaaagctgctagcgcaacagaaccgagcgaggaggaattgtttcttgcatgcatccttggttggggcatcgaatggcttcaggcctattttctggttcttgatgatataatggataactcacaaactcgacgaggaaaaccctgttggtttaggcttcccaaggtcggcctcatagctataaatgatggactcgtccttcgcagccaaatttcaaggatctttaggcgctattttcgtggaaaaagttactatgttgatctcctagatttattcaatgaggttgaaattcagacaacttcaggccagttattagatcaaattacaacaaatgaaggaaggaaagatctgaacaagtataatgtacatgtatataggcgcattgtggaatataagacagcttactattcattttatttgccggttgcatgcgcactgctgttgtttgatgagagtttggacaattatgctcaagtgaagcatatcctagttgagatgggtgtttactttcaaagccaggatgattatctggactgttttggtgaaccagaaattattggcaagataggaagtgacattgaagatttcaagtgttcttggctatttgttcaagcacttgagcgcgctgatgagaaacaaaaaggagtcttgtttgaaaattatgggaaatcagatccagcttgtgttgccaaagtgaaggatctatataacgaacttcatctccagcgggtgttttctgagtatgaaagggagagctatgaaaagctgatctcagccatcgaagcacaaccgaatgaagcagtacgagcggttctgaaatcttttctgcacaagatctacaagaggagcaagtag</cdnaseq>

Protein Sequence

<aaseq>MLDYNVLGGKLNRGLAVVESYKILKAASATEPSEEELFLACILG WGIEWLQAYFLVLDDIMDNSQTRRGKPCWFRLPKVGLIAINDGLVLRSQISRIFRRYF RGKSYYVDLLDLFNEVEIQTTSGQLLDQITTNEGRKDLNKYNVHVYRRIVEYKTAYYS FYLPVACALLLFDESLDNYAQVKHILVEMGVYFQSQDDYLDCFGEPEIIGKIGSDIED FKCSWLFVQALERADEKQKGVLFENYGKSDPACVAKVKDLYNELHLQRVFSEYERESY EKLISAIEAQPNEAVRAVLKSFLHKIYKRSK</aaseq>

Gene Sequence

<dnaseqindica>2573..2701#2168..2239#1998..2087#1865..1909#1664..1759#1202..1253#977..1065#780..896#352..438#133..254#1..25#atgctggactacaacgtgcttggtggtgagaaaaacatgctattcagaaacaatgcgaccaaaccaaacaatggcacattgcgatatggttggcaagtgatttagtcatttaagatctctgctcttgtacaggaaaattgaaccgtggcttggctgttgttgagagctacaaaatactgaaagctgctagcgcaacagaaccgagcgaggaggaattgtttcttgcatgcatccttggttggggcatcgaatgggtacatgatacttgtatgatttagtgacctgggattatgaaacaacaatattagcaaaatattttctaaacttttttgttctttgagtaacctgcagcttcaggcctattttctggttcttgatgatataatggataactcacaaactcgacgaggaaaaccctgttggtttaggcttcccaaggtttgtcaagtaggattaacttgtccacatagaaatgtccttgtgttactgtagattctcgagtgttgttaaaatgttatgattgtactccaactaaacaaaggaaaaggtaaaaataataacggatgataatattgttctcagatgctactgttggctaaatagcaaggggcagctccacactagggataggtttgatcatggtattagcttgattatctagtaactagcataagatgcaaggaatgatatagatatgtagattaatgctgtttacaatttgagtcctttccttgtcttggttaaatggtgatttagctcatattttctaccttgagcaggtcggcctcatagctataaatgatggactcgtccttcgcagccaaatttcaaggatctttaggcgctattttcgtggaaaaagttactatgttgatctcctagatttattcaatgaggtagttttacattcttaggatttctcttatttgagaaccaatttcattactgaagcataattttgttgcttcctccctaggttgaaattcagacaacttcaggccagttattagatcaaattacaacaaatgaaggaaggaaagatctgaacaagtataatgtacatgtgtatgccactgaattacgaatttctccatggtgtcatactgacatactgcttgcttagtgccctagaaggcagttgtttgtcagtttcatttttactcttcttgcttgataataatcatttttgaattttatgcagatataggcgcattgtggaatataagacagcttactattcattttatttgccggtaaaaatgaatgactcccatataatattttgaaacttttatagcatcaattcaggctgttgctcgtcgatttcttcaaactgagaaaatgtttccgcttttgctgccccttggggaaatgttttatacttttcatgaatacttacactgttccaatatgtggctaatcaaagtaaacttagaaatctaattcaaatgatcagctttcgctgtaccatgactcatgactcatgagcatggttcctcacaaacaggggtacatatagctcagaatgaaacttgatagtcctagaaacaacttcttgtaattcatcttgtggaaaaatgcttgtgcacatgtcgtagtgaggttgagttttgtggttgtttttgtttggtattcacaagcaaaactttttcaaccttacaaggttgcatgcgcactgctgttgtttgatgagagtttggacaattatgctcaagtgaagcatatcctagttgagatgggtgtttactttcaaagccaggtaagatcatcttgatgtttcgttctcttttccacttgaatgcttctcttcttggtttttctgttttcattcatatcagtatcgctagtaaggttttctttccaggatgattatctggactgttttggtgaaccagaaattattggcaaggtaagtacactcctgcagtactatcacaagtttcatagtacactatcaaatgttctttggacttgatccccaagcaatcttaccacagataggaagtgacattgaagatttcaagtgttcttggctatttgttcaagcacttgagcgcgctgatgagaaacaaaaaggagtcttgtttgtaaggcccccgcgcagtactaaactgtatctttgcatagttaagcatgacgtcttattctgtgaatggcatgattgcaggaaaattatgggaaatcagatccagcttgtgttgccaaagtgaaggatctatataacgaacttcatctccaggtgttcccccattatttttgttttcttttaaaatattttttatacataaaatggttttttgttttccattttgtcgttcaatgttgaaaaatatgtcttttttttcttaagatggtataatccagccaagtttcagccttcaatccttgattttgaatgttcgactttttacaaaaagatgcaatgaagccttgatattatatgcaaccgagacgcttacccaaaaaatgctgtgatctgtatctgtttactcatttctttctgcagttgccgcgtgctttcctgccatgacaaattcatttatcatacctgatttttttttaaatctttcagcgggtgttttctgagtatgaaagggagagctatgaaaagctgatctcagccatcgaagcacaaccgaatgaagcagtacgagcggttctgaaatcttttctgcacaagatctacaagaggagcaagtagaacacggctgaaaaataaggccaattttggcatctcgtggattattctggttcttggcttcttgttgggatgtatagcataggtgtgataggtttctaacttctgggactttgcaacgaggaacgtgcctgataaataagaaaaatagtttc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0695300, RefSeq:Os01g0695300