Os01g0696800

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Revision as of 04:55, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0696800| Description = Peptidase A1, pepsin family protein| Version = NM_001050503.2 GI:297597433 GeneID:4325291| Length = 1571 bp| Defini...")
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Gene Name

Os01g0696800

Description

Peptidase A1, pepsin family protein

Version

NM_001050503.2 GI:297597433 GeneID:4325291

Length

1571 bp

Definition

Oryza sativa Japonica Group Os01g0696800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:30591128..30592698

Sequence Coding Region

30591140..30591184,30591542..30592501

Expression

GEO Profiles:Os01g0696800

Genome Context

<gbrowseImage1> name=NC_008394:30591128..30592698 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:30591128..30592698 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggataccaaattgggagcgcttgctctcatgctcccgcttctataccccaccagctccagctccgccgcgttcgtcgcgtgcggcgaccgcacgtgcggggagctgccccgaccactgtgcagcaacgtcgccggcggcggcagcggcagcggcaactgctcctaccactacgcctacggcaacgctagggacacgcaccactacacggagggcatcctcatgacggagaccttcaccttcggcgacgacgccgcggcgttcccgggcatcgcgttcgggtgcacgctccgctccgagggcggtttcgggacgggctcgggcctcgtcgggctcggcagagggaagctgtccttggtcacgcagctcaacgtcgaggccttcggctaccgcctctcgtccgacctgtccgcgcccagccccatctcgttcggctccctcgccgacgtgaccggtggcaacggcgacagtttcatgtccactccgctactcacaaacccggtggttcaggaccttccgttctactacgtcggtctgaccggcatctcggtcggcgggaagctcgtgcagataccttcggggaccttctccttcgaccggagcaccggggcgggcggcgtcatcttcgactccggtaccacgcttacgatgctcccggaccccgcgtacacgctggtgagggacgagctgctgtcacagatgggctttcagaagccaccaccggcagcgaacgacgacgacctgatctgtttcaccggggggtcgtcgacgacgacgttcccgtccatggtgctgcacttcgacggcggcgccgacatggacctgtccaccgagaattacttgccgcaaatgcaaggccagaacggggagacagcccggtgctggtccgtggtgaaatcatcgcaagccttgacgatcatcggcaatatcatgcagatggacttccacgtcgtgtttgatctgtccggcaacgcgcggatgctgttccaaccgcccaccgcctga</cdnaseq>

Protein Sequence

<aaseq>MDTKLGALALMLPLLYPTSSSSAAFVACGDRTCGELPRPLCSNV AGGGSGSGNCSYHYAYGNARDTHHYTEGILMTETFTFGDDAAAFPGIAFGCTLRSEGG FGTGSGLVGLGRGKLSLVTQLNVEAFGYRLSSDLSAPSPISFGSLADVTGGNGDSFMS TPLLTNPVVQDLPFYYVGLTGISVGGKLVQIPSGTFSFDRSTGAGGVIFDSGTTLTML PDPAYTLVRDELLSQMGFQKPPPAANDDDLICFTGGSSTTTFPSMVLHFDGGADMDLS TENYLPQMQGQNGETARCWSVVKSSQALTIIGNIMQMDFHVVFDLSGNARMLFQPPTA </aaseq>

Gene Sequence

<dnaseqindica>13..57#415..1374#gctctctgtaatatggataccaaattgggagcgcttgctctcatgctcccgcttctactgctgatttccgctactcgcgtagcctacggcggcatccaacccacgccgcctcccgcgagcttccaagccgccttggtccgcatcgagcccgcaggcatcaactacacgcgcgccgtgcagcgctcccgctcccgcctgtccatgctcgccgccagagcggtgtccaacgcgggggcggcgccgggggagagcgcgcagacgccgctgaagaaggggagcggcgactacgccatgtcgttcggcatcggcacgccggcgacggggctgtcgggcgaggcggacaccgggagcgacctcatctggaccaagtgcggcgcctgcgcgcggtgctcgccgcggggctccccgtcctactaccccaccagctccagctccgccgcgttcgtcgcgtgcggcgaccgcacgtgcggggagctgccccgaccactgtgcagcaacgtcgccggcggcggcagcggcagcggcaactgctcctaccactacgcctacggcaacgctagggacacgcaccactacacggagggcatcctcatgacggagaccttcaccttcggcgacgacgccgcggcgttcccgggcatcgcgttcgggtgcacgctccgctccgagggcggtttcgggacgggctcgggcctcgtcgggctcggcagagggaagctgtccttggtcacgcagctcaacgtcgaggccttcggctaccgcctctcgtccgacctgtccgcgcccagccccatctcgttcggctccctcgccgacgtgaccggtggcaacggcgacagtttcatgtccactccgctactcacaaacccggtggttcaggaccttccgttctactacgtcggtctgaccggcatctcggtcggcgggaagctcgtgcagataccttcggggaccttctccttcgaccggagcaccggggcgggcggcgtcatcttcgactccggtaccacgcttacgatgctcccggaccccgcgtacacgctggtgagggacgagctgctgtcacagatgggctttcagaagccaccaccggcagcgaacgacgacgacctgatctgtttcaccggggggtcgtcgacgacgacgttcccgtccatggtgctgcacttcgacggcggcgccgacatggacctgtccaccgagaattacttgccgcaaatgcaaggccagaacggggagacagcccggtgctggtccgtggtgaaatcatcgcaagccttgacgatcatcggcaatatcatgcagatggacttccacgtcgtgtttgatctgtccggcaacgcgcggatgctgttccaaccgcccaccgcctgatacgggagattatgaccgttgattttgtgcgccgtatgtagtactagcactctagcagtgtagcacgtacaattgtgccgtagcgaataagttctgcacaaattattttctgccatccgcgcttagttgtaagtacgcgagcttatgtaatagtcttccaagagaaattgaacgggcataatactgcatgtacggtt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0696800, RefSeq:Os01g0696800