Os01g0700200

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Revision as of 04:55, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0700200| Description = Similar to Chromosome condensation regulator protein (Fragment)| Version = NM_001050519.1 GI:115439408 GeneID:4326924...")
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Gene Name

Os01g0700200

Description

Similar to Chromosome condensation regulator protein (Fragment)

Version

NM_001050519.1 GI:115439408 GeneID:4326924

Length

5745 bp

Definition

Oryza sativa Japonica Group Os01g0700200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:30733964..30739708

Sequence Coding Region

30734611..30734628,30734742..30734828,30734917..30735006,30735104..30735190,30735349..30735465
,30736173..30738180,30738256..30738404,30738586..30739019,30739111..30739255

Expression

GEO Profiles:Os01g0700200

Genome Context

<gbrowseImage1> name=NC_008394:30733964..30739708 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:30733964..30739708 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacaccagatgaaactgcccttattactttaaagaaaggtactaaactcatcaagtatagccggagaggaaaacccaagatccgtgcgttcagactttctagcgatgaaacatctttaatttggttttctcacaaaaaggaaaagttcctcagactgtcttctgtcactaagatcattcctggacagagaactgctgtgtttgggaggtttttacaccctgagaaggattatttatcattttccctcatatttaaaaacgggcaacgctcacttgatctggtttgtaaggatcaagctgaagttgaagtctggttttcagcacttgaggggttaataagttcattccgcaaaaaatctttgattaacgaacacaaggatagagtatcattttctgaagaagtaacttattatcaagatcgccattcctatgattcaacactagatattgcttcaaatatttcacgcagttttaactcagctggttactgtggaaccaattcatttagtttcagaaaatcagatgtgggatttgatcgtctaaatatgataagaacaagtgctgcagacagtagccgggttagtatttctagtgcccttagttcttacagtcaaggttctggaacagatgacatagaatcccttggtgatgtttatgtctggggtgaagtatggactgatgtaaccccatcagatgggcacacaagctcttcatgctcaaaagtagatgttttgatccccaaacctttagaatctgatgtcgtgttagatgttaatcagatagcatgtggtacgagacatgtagctcttactaccaggcaaggagaggtgtttacgtggggtgaggaatttggtgggcgcctaggtcacggaactgatgctgatattagtcgccccaagcttgtcgagtctttatcactaaccgtagttgatcttatttcatgtggagaattccatacttgtgctgtgactacttccggtgatctattcaattggggggatggttcttacaatgtcggactgcttgggtgtggcactgaagttagctactggcttccaaagaaagtctcagggcccttagaaggtcttcaagttctatctgttgcatgtggctcatggcattctgctttgaccacatcaagtggaaaactttacacatttggtgatggaacatttggtgttcttggacatggtgaccgtgaaactttagcatacccaaaagaggtagaagccttgagtggattcaaaacgatcaaagttgcatgtggaatttggcattctgcagcaattgtggaggttactaatcagacaggtgcaaatgtgatgtctaagaagttatatacctggggtgatggagataagaaccgccttggccatggggacaaagagcctaggttagttcctaaatgtgttcaagcgcttttagagtacaattttcatcagctggcttgtggacataatatgactgttgccctagctacatctggtcgtgtgtttaccatgggtagttccagcaatggccagcttggaaatccaaaatctgatggcaagcagccttgcttagttcaagatagattggctagtgagttggttgaagagatttcatgtggagcttctcatgttacagttttgacttcaagaagtgaagtatatacatggggaatgggtgccaatggaagacttggtcatggcgatctcaaggacaggaagaagccatgtcttgttgaagcacttaaagatcggcatgtcaagagtatatcatgtggttcaaatttcacaacatgtatttgcatacataagtgggtatcaggtgcagatcaatctgtctgcacgggttgcaggcaagcatttggtttcactagaaagagacatgattgctacaactgtgggctggttcattgtcatgcttgcagttcaagaaaagtgttgaaggctgctctagcaccaactccaggcaagccacatcgtgtgtgtgattcatgctttctaaaattgaaagccgcagagaccggcagcaacaattctaacagaagaaatgctgttactcgtcgctctattgatgggagagagaagcttgagaggccagaaataaggccttccaggacaacagcaccagcggaatcagtcaagtatacagaggtaaaagctgcaagaaatgatatgagagcatcccaaatttcttccttgctacagttcaaagatcttagcttctctgctcttcaacccacggcgatgtcaccagctgtaactatgtcacctgcagtacctgcactctcaacaccatctccatacacaaagaaaacaaaatcacctgcacctgcaatcccgcaattccctaaaactgatatagataacttgcagaagtctaacgaattgctgaatcaagaaatgttgaagctgcaatctcaggttgatagcttaaaacaaaagtgcgaggcccaacacgagcagcttcagatatcagataagaaaactaaaacagttgtctctatggccacggaagaatatactagatgcagtgctgtggtcgagtttgttaaatttcttgataacgagctcaatggtatagtgcatgaactgcccagcgatgcagcagaaagcttgaaagccttacaaaatcaggtgcaggcactgctgagggagcaaagaagtcatccttctgagcttctaaatcctatggatcatgatggtattcaactgtctagtggtggaaatgcattacatgatttttccaatcataggtcaggaagtacacgctacttgttcatgtcacaagatgccagttctgcaagtggctctgccatttcacttacaagtgaacccccttcccatcgtggcatggaacaccacgcaaaggttcctaacgattttgtaccgaagcatgatactcatggagaagttcaattaattgagcagtttgaacctggtgtatatgtcacacttatccagctgaaggatggtagcaaagtattcaagcgggtccggttcagcaagaagaaatttgcagagaatcaggctgaagaatggtggcgggaaaaccaagagcgggtcttcaagaagtacagccatccgactgttcctcaaacaacatcaacgaaaacaggatcttctaacgaggaagaacatcactcatga</cdnaseq>

Protein Sequence

<aaseq>MTPDETALITLKKGTKLIKYSRRGKPKIRAFRLSSDETSLIWFS HKKEKFLRLSSVTKIIPGQRTAVFGRFLHPEKDYLSFSLIFKNGQRSLDLVCKDQAEV EVWFSALEGLISSFRKKSLINEHKDRVSFSEEVTYYQDRHSYDSTLDIASNISRSFNS AGYCGTNSFSFRKSDVGFDRLNMIRTSAADSSRVSISSALSSYSQGSGTDDIESLGDV YVWGEVWTDVTPSDGHTSSSCSKVDVLIPKPLESDVVLDVNQIACGTRHVALTTRQGE VFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVDLISCGEFHTCAVTTSGDLFNWGD GSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACGSWHSALTTSSGKLYTFGDGTF GVLGHGDRETLAYPKEVEALSGFKTIKVACGIWHSAAIVEVTNQTGANVMSKKLYTWG DGDKNRLGHGDKEPRLVPKCVQALLEYNFHQLACGHNMTVALATSGRVFTMGSSSNGQ LGNPKSDGKQPCLVQDRLASELVEEISCGASHVTVLTSRSEVYTWGMGANGRLGHGDL KDRKKPCLVEALKDRHVKSISCGSNFTTCICIHKWVSGADQSVCTGCRQAFGFTRKRH DCYNCGLVHCHACSSRKVLKAALAPTPGKPHRVCDSCFLKLKAAETGSNNSNRRNAVT RRSIDGREKLERPEIRPSRTTAPAESVKYTEVKAARNDMRASQISSLLQFKDLSFSAL QPTAMSPAVTMSPAVPALSTPSPYTKKTKSPAPAIPQFPKTDIDNLQKSNELLNQEML KLQSQVDSLKQKCEAQHEQLQISDKKTKTVVSMATEEYTRCSAVVEFVKFLDNELNGI VHELPSDAAESLKALQNQVQALLREQRSHPSELLNPMDHDGIQLSSGGNALHDFSNHR SGSTRYLFMSQDASSASGSAISLTSEPPSHRGMEHHAKVPNDFVPKHDTHGEVQLIEQ FEPGVYVTLIQLKDGSKVFKRVRFSKKKFAENQAEEWWRENQERVFKKYSHPTVPQTT STKTGSSNEEEHHS</aaseq>

Gene Sequence

<dnaseqindica>648..665#779..865#954..1043#1141..1227#1386..1502#2210..4217#4293..4441#4623..5056#5148..5292#gggctagcattttggttggttcgatggagtctaaatcccccagtttttaatctgtgagccgtctccctgcactctgatgtctgtttcgtctggcttttgattccattgtgattaattaggtcatgatgttagatgcaaatttgtatgtcattgcggatgataatgctgtattgaaatgcatggggattgggggttcatgcaggtagactcggacgctagctggccggcgcaaatatgtgagttcttctgatttttttttttttacgtaagaaggtagagtcagccatttcatcgatataaatgagtgtaaggtacatgaggaaggggggtggaggaaaaaaagagagaaaagagagtaaaagagagaatgtacaaaagttcaaaaagtaataattctgattcaaccgagcacctgcatgtcttcgaatttagggggaaaaactaagtgcaaactacagacatttccatctgtgcagcctacttgttatttctctgattgctgaatgcaaatgtgatttggagggcgggtgggttgatcggttcctgtgatacacagatactgctactcaagcttggtctcttttgtttatttttatgcaggtgactgtgtaaagctgacaataggatgttgacatgttgctgtttagatgacaccagatgaaactgtacaattctagacacaattgtgatgccttctttattgatctccttttgtatttgtgcgtgcatgtgtcaaactattggctaacactaatgctccatgtttaatattctcaaggcccttattactttaaagaaaggtactaaactcatcaagtatagccggagaggaaaacccaagatccgtgcgttcagactttctagcgtaagcgataagccccaagtatgtgccgattgcttgatgtcggtgataccaaatttgattatgtccctttgacctttacgtattgcaggatgaaacatctttaatttggttttctcacaaaaaggaaaagttcctcagactgtcttctgtcactaagatcattcctggacagagaactgtaagtcctccatatccttaaacaacaacagttgcaaaagagcataaacttccatcaagctggtaccttgctatcctactaatcaacttttcaccaggctgtgtttgggaggtttttacaccctgagaaggattatttatcattttccctcatatttaaaaacgggcaacgctcacttgatctggtatggtaaagataaaattatgtaattcactcaatctaagtcccaatcattagcttatgataaatacttattttttttcgattcatagcataggttgagtctatgatagcatgcactgcagaggacattcctagtatgaacttctttctattctgcaggtttgtaaggatcaagctgaagttgaagtctggttttcagcacttgaggggttaataagttcattccgcaaaaaatctttgattaacgaacacaaggatagagtatcattttctgaagtgagttatgctcgaccttcctacaggaatttctgtgcctctgtacgcaactatattcatggttcagttttgctatacagttaccattttagaaggaaaaaatgactcaagcatcgtagatatgcatataacgcacaaataccataataccgtaagttttttcgagaaaagaaatttagttcaatttataatgaaagttataggtttatacagcaaaagtaaaagtaggggttactagcttacaataatgtacatgaaacaaaagcacctaaactttaggagtgcagaccctctagacaagatggaacataaacttttccaggatgatgagtccaggctaagactgcctcagctccctaccttttgttttgctctgaacaattaactcatccaccaaaattctatgattgttactgaaaaaaatatatgtacatactaaaagcatacatcattaaaatgttactttgatcaatctagtttttagttatgtactctactccgctctgtaacatgtgggagctaggtatccactttgaatcttttatctatctagattttggttaccaactcttctcctctttctatcaactaactctgctcctcttcgagaattataagcccctatataattaggatgtatagtatattctgagacagcaagtctttacaaatattctaatatagtgcgccttccttcttttttccaggaagtaacttattatcaagatcgccattcctatgattcaacactagatattgcttcaaatatttcacgcagttttaactcagctggttactgtggaaccaattcatttagtttcagaaaatcagatgtgggatttgatcgtctaaatatgataagaacaagtgctgcagacagtagccgggttagtatttctagtgcccttagttcttacagtcaaggttctggaacagatgacatagaatcccttggtgatgtttatgtctggggtgaagtatggactgatgtaaccccatcagatgggcacacaagctcttcatgctcaaaagtagatgttttgatccccaaacctttagaatctgatgtcgtgttagatgttaatcagatagcatgtggtacgagacatgtagctcttactaccaggcaaggagaggtgtttacgtggggtgaggaatttggtgggcgcctaggtcacggaactgatgctgatattagtcgccccaagcttgtcgagtctttatcactaaccgtagttgatcttatttcatgtggagaattccatacttgtgctgtgactacttccggtgatctattcaattggggggatggttcttacaatgtcggactgcttgggtgtggcactgaagttagctactggcttccaaagaaagtctcagggcccttagaaggtcttcaagttctatctgttgcatgtggctcatggcattctgctttgaccacatcaagtggaaaactttacacatttggtgatggaacatttggtgttcttggacatggtgaccgtgaaactttagcatacccaaaagaggtagaagccttgagtggattcaaaacgatcaaagttgcatgtggaatttggcattctgcagcaattgtggaggttactaatcagacaggtgcaaatgtgatgtctaagaagttatatacctggggtgatggagataagaaccgccttggccatggggacaaagagcctaggttagttcctaaatgtgttcaagcgcttttagagtacaattttcatcagctggcttgtggacataatatgactgttgccctagctacatctggtcgtgtgtttaccatgggtagttccagcaatggccagcttggaaatccaaaatctgatggcaagcagccttgcttagttcaagatagattggctagtgagttggttgaagagatttcatgtggagcttctcatgttacagttttgacttcaagaagtgaagtatatacatggggaatgggtgccaatggaagacttggtcatggcgatctcaaggacaggaagaagccatgtcttgttgaagcacttaaagatcggcatgtcaagagtatatcatgtggttcaaatttcacaacatgtatttgcatacataagtgggtatcaggtgcagatcaatctgtctgcacgggttgcaggcaagcatttggtttcactagaaagagacatgattgctacaactgtgggctggttcattgtcatgcttgcagttcaagaaaagtgttgaaggctgctctagcaccaactccaggcaagccacatcgtgtgtgtgattcatgctttctaaaattgaaagccgcagagaccggcagcaacaattctaacagaagaaatgctgttactcgtcgctctattgatgggagagagaagcttgagaggccagaaataaggccttccaggacaacagcaccagcggaatcagtcaagtatacagaggtaaaagctgcaagaaatgatatgagagcatcccaaatttcttccttgctacagttcaaagatcttagcttctctgctcttcaacccacggcgatgtcaccagctgtaactatgtcacctgcagtacctgcactctcaacaccatctccatacacaaagaaaacaaaatcacctgcacctgcaatcccgcaattccctaaaactgatatagataacttgcagaagtctaacgaattgctgaatcaagaaatgttgaagctgcaatctcaggcaagaatgaaactgctgtttattctgtaccttgttacagctagctattctgataaaccattgtgttttcaataggttgatagcttaaaacaaaagtgcgaggcccaacacgagcagcttcagatatcagataagaaaactaaaacagttgtctctatggccacggaagaatatactagatgcagtgctgtggtcgagtttgttaaatttcttgataacgaggtatagtaaaatccttttgataatattgtggttcagatcttggatgttattagggttcttctctattgaatttattttctttactaaatggctgtagaaacagaatatcatccatgtttggaggaatgaatctaatgactatttcatgtcaccggatacctaatcatccactcttctgcagctcaatggtatagtgcatgaactgcccagcgatgcagcagaaagcttgaaagccttacaaaatcaggtgcaggcactgctgagggagcaaagaagtcatccttctgagcttctaaatcctatggatcatgatggtattcaactgtctagtggtggaaatgcattacatgatttttccaatcataggtcaggaagtacacgctacttgttcatgtcacaagatgccagttctgcaagtggctctgccatttcacttacaagtgaacccccttcccatcgtggcatggaacaccacgcaaaggttcctaacgattttgtaccgaagcatgatactcatggagaagttcaattaattgagcagtttgaacctggtgtatatgtcacacttatccagctgaaggatggtagcaaagtattcaagcgggtccggttcaggtacatctccctatccatgctgcaatctagatgttaaactgctacatcctttccatctaaaattttccgtctccttaaatttgtcggacagcaagaagaaatttgcagagaatcaggctgaagaatggtggcgggaaaaccaagagcgggtcttcaagaagtacagccatccgactgttcctcaaacaacatcaacgaaaacaggatcttctaacgaggaagaacatcactcatgatctttaatgaggtttctacaaattgcggaagaagcttcaaattggtgagacactgtacagcgagtcttgacaggaaatttcgactctctaattggttattgctcggagaaaaatacctgcttatgtcgaaagtataggataatttttatttagtgccaaaacttagtttagttacagaccatattaaaagcaagtcggagttaagtaactcttttctaggtgagaaattagtagagtattgagtattgactatctgggtcgatgttgcgaagggaatgacggaggaagcggcgctctggcgggcggcaaactcggcaatcccatcatttctttcacaaatcccaggccattttgtttctgtcttccagtatcggccccctgctgtttttcgatctttaattgtaaataacttttatttctcttaatagaaaaaatgcgcctgtggcgtattcc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0700200, RefSeq:Os01g0700200