Os01g0703400

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Revision as of 04:55, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0703400| Description = Similar to Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS) (Farnesyl diphosphate synthetase) [Includes: Dimet...")
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Gene Name

Os01g0703400

Description

Similar to Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS) (Farnesyl diphosphate synthetase) [Includes: Dimethylallyltranstransferase (EC 2.5.1.1)

Version

NM_001050535.1 GI:115439440 GeneID:4324245

Length

4242 bp

Definition

Oryza sativa Japonica Group Os01g0703400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:30914151..30918392

Sequence Coding Region

30914235..30914378,30915986..30916126,30916226..30916312,30916556..30916672,30916765..30916853
,30917098..30917149,30917255..30917350,30917423..30917467,30917590..30917679
,30917752..30917823,30918078..30918206

Expression

GEO Profiles:Os01g0703400

Genome Context

<gbrowseImage1> name=NC_008394:30914151..30918392 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:30914151..30918392 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcggtggtggcgaacggcgcgagcggcgactcctccaaggccgcgttcgcggagatatacagcaggctcaaggaggagatgctcgaggacccggccttcgagttcaccgacgagtcgctccagtggatcgaccgcatgctggattacaatgtgctcggaggaaagtgcaaccgcgggatctctgtcattgatagtttcaagatgttgaagggcactgatgttctgaataaggaggagacatttcttgcctgcacccttggttggtgcattgaatggcttcaagcttattttcttgtgcttgatgatattatggacaactctcaaacacgacgtggccagccttgctggtttagggtgcctcaggttgggctcattgctgtaaatgatggtattatccttcgcaaccatatttcacgaattcttcaacgccattttaaaggaaagctgtattatgttgatctcattgatttgttcaatgaggttgagtttaagactgcttcaggtcaattgttggatcttattactactcatgagggagaaaaggatctcacaaagtacaacttgacagttcaccgccgcattgttcagtacaagacagcttactactcattctatcttccggttgcatgtgctttgctgctatctggtgagaatttggataacttcggtgatgttaagaacattcttgtggaaatggggacatacttccaagttcaggatgattatctagattgttatggtgatcctgagtttattggcaagattggaacggacattgaagactacaagtgctcatggttagttgtgcaagctctcgagcgtgctgacgagaaccaaaagcacattctatttgaaaattatgggaagccagatcctgaatgtgttgcaaaagtgaaggatctgtataaagaacttaatctggaggccgtatttcatgaatacgagagggagagttacaataagctgattgccgacatcgaagcacatccgaacaaagcagttcagaatgtattgaaatccttcctgcacaagatctacaagaggcagaagtag</cdnaseq>

Protein Sequence

<aaseq>MAAAVVANGASGDSSKAAFAEIYSRLKEEMLEDPAFEFTDESLQ WIDRMLDYNVLGGKCNRGISVIDSFKMLKGTDVLNKEETFLACTLGWCIEWLQAYFLV LDDIMDNSQTRRGQPCWFRVPQVGLIAVNDGIILRNHISRILQRHFKGKLYYVDLIDL FNEVEFKTASGQLLDLITTHEGEKDLTKYNLTVHRRIVQYKTAYYSFYLPVACALLLS GENLDNFGDVKNILVEMGTYFQVQDDYLDCYGDPEFIGKIGTDIEDYKCSWLVVQALE RADENQKHILFENYGKPDPECVAKVKDLYKELNLEAVFHEYERESYNKLIADIEAHPN KAVQNVLKSFLHKIYKRQK</aaseq>

Gene Sequence

<dnaseqindica>85..228#1836..1976#2076..2162#2406..2522#2615..2703#2948..2999#3105..3200#3273..3317#3440..3529#3602..3673#3928..4056#atactcgccactaatttcttctctctttctctctctctccgcgccctcgcatcgcacgtgaggcagtcgagggatagcggcgcaatggcggcggcggtggtggcgaacggcgcgagcggcgactcctccaaggccgcgttcgcggagatatacagcaggctcaaggaggagatgctcgaggacccggccttcgagttcaccgacgagtcgctccagtggatcgaccgcgtaatgctctcttccccgtctcgatcctttatgctgggagggatacggatgttggtttttgatctggtttagcgagaggggagggagggggtggcgttgatgcctacgtgctcgcgtgacgcgtcaaaggcttttggaatttcgccgggttttctgggcttacgagtggcgcttggctggtggattcgctctgttattggtatatgtgtttcctgatggtagaatgttaggagtatggagtatgcgagcaatgactagggggtaacgaagtaagtttacgtctcacatacagatcgatatggtgtgttgaattgcatagtgggtctgaactctgagcaacagagcgagtaatctctctctcttatctgttaacaagagtaggtgaacaaggaaggcagggcttttctaggctacagtgattgatcgatcaacttgttaggaaaagccggacaggagtgtctttttttacctacagtcgctggtgaagtagatcatataaagtcaccttatgaactttaagcatacggatttcatttctgttgtacaacagatcctttaaaaaattagtaaagctagccttttggacaccatgttctcttttatttgtgtgtgtgttggaggaaggggggcacaaaattcttgttgagtattttgatctttgcctaagtacatcttttggaatatttagatcgataaggtgaaaatgctgtgggtttccttgacataaaagatgaactcaccgtatgttgagttgttctatattgcagcaaaaacgatctatcaaagctgcatctccttaaccgtggaaagttaaaaagagctagttgtttttactactttgcatgtcaatatttcagatccaagctgcatctccttaaccgtggaaagataaaaagagctagttgtttttactactttgcatgttaatatttcagatcccgttggttagacagtataaatattacagatgttccttcaaaaataaagagtaaatttcactttgggccaccttttattactgatgtttcgctttggacgatcctttgaccaatgttttcactttaaaccaggtaaatcttgcctttgtttcactttgggacaccccaactctcttctcaagcatatgaatgacctcgagtatgccggctcatactcgtcaataaactccctcggctatatgtagatcatttctttgacatatgaatgcagatggataaaggagttgagggtggcccaaagtgccacaaaggtaaattatccggtccaaagtgaaagcattggttaaagagttgtccaaagcgaaacaccggtaataaaatatatataggtgaaaagctggggagcacaatacattgttcaggtgtattctaaaagttttactactttttactgttaatgacacaacagtagtagctaagtgtaaatgattggttgctgatggtttgtttctgttgtttgatttttatcctctacctattaccatttccatttccatttaccattgttatttattgtgtattgatatcagaatcatacccacagaaattggacatacagtatatttgagtatgttaaagtagttgacattttttttttatccggagcagatgctggattacaatgtgctcggaggaaagtgcaaccgcgggatctctgtcattgatagtttcaagatgttgaagggcactgatgttctgaataaggaggagacatttcttgcctgcacccttggttggtgcattgaatgggtaatgttttctccaaatgctatcttgtaggatgtttgttagccaagtgaagttatatgctaagtgtggcaccactgatggttctgcataattttgcagcttcaagcttattttcttgtgcttgatgatattatggacaactctcaaacacgacgtggccagccttgctggtttagggtgcctcaggtcagtagcagaacaatcatcctttgtatgcatcaatttttttatatatattgtttttttataactgtatgaattataatccagaattgcacaggcattgaaaaaaaaaggtcatgcattaagtaactgattcatgttcccttttttcaatccttgtaaggagtgtgatcagattagcacaatgttgaattgctatctgttacctataaaactaaatttgtgtatttcattgttttgcaataggttgggctcattgctgtaaatgatggtattatccttcgcaaccatatttcacgaattcttcaacgccattttaaaggaaagctgtattatgttgatctcattgatttgttcaatgaggtaagttgtatcttctgacatgcacatattgttgggaaaaaaatactgtacgcttctccctgatgcccagttgtatgtttttgttttgttaggttgagtttaagactgcttcaggtcaattgttggatcttattactactcatgagggagaaaaggatctcacaaagtacaacttgacagtgtaagttcattttgcatttacgtgtttgtttctttctttctttgcatgatttcctgtccatttgtttctaaaaataaggttcaaacaaaacaaaggaacggaaaaaataacagatagttccttttctgtgttccatgtgtagtttctagaatgagttgtatttgcactatattttattttagcagttcagaattgggttatgatcttcatttaatggtgttcttttaactgacatattgtgcagtcaccgccgcattgttcagtacaagacagcttactactcattctatcttccggtaggatttaccattctcctatggattttttccatctttaaactctcacttcggtaatctgcgaatagttgtcatcactagcaataatatttttctttatccaaggttgcatgtgctttgctgctatctggtgagaatttggataacttcggtgatgttaagaacattcttgtggaaatggggacatacttccaagttcaggtaccttttcaccttgttggttgtgaatttatatattactggactaccgcactaatacgagttttctcacaggatgattatctagattgttatggtgatcctgagtttattggcaaggttagtgtgcccgttgtggttgtactaatcccaatgagtatggctactgccaatcggtccattgctgtccaggcttattttatctgtagcttatgatctgatcagtagaaatcttaatgcagattggaacggacattgaagactacaagtgctcatggttagttgtgcaagctctcgagcgtgctgacgagaaccaaaagcacattctatttgtaagtattattaactttgtagtttttatcaacccatgggcaccatctgaatcctttatgtctaattgacaggaaaattatgggaagccagatcctgaatgtgttgcaaaagtgaaggatctgtataaagaacttaatctggaggtttgtcttaaccgttctctgtatttatgttatgtgtatcatcatcacctgagtaaacatatgcagacatcatacgcaggtgtgaaaaagaataattaccatcccaactcgatgaggaacaaaacttagaactcagttgtttttttaagaataagaaggaactcatttgttgaagatgcttgaaacaataattcagaatttctcatttatccattgcaagacctgaggcactgcttttatctgttatactgcaggccgtatttcatgaatacgagagggagagttacaataagctgattgccgacatcgaagcacatccgaacaaagcagttcagaatgtattgaaatccttcctgcacaagatctacaagaggcagaagtagagctaagctcatggagaagctgtttcatgtttgcttggtaactagagtcgtggggacaaataactggtaactagaatcatggggactgttccctgatgttgtgtgtattatggttatgttcgtaccgtgtagtacagcgtgctactccgtaaaataatgaagcatggtgctatttatgcgtgcgtg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0703400, RefSeq:Os01g0703400