Os10g0502000

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Revision as of 08:44, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0502000| Description = Similar to Thylakoid lumenal 17.4 kDa protein (P17.4) (Fragment)| Version = NM_001071524.1 GI:115482791 GeneID:434904...")
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Gene Name

Os10g0502000

Description

Similar to Thylakoid lumenal 17.4 kDa protein (P17.4) (Fragment)

Version

NM_001071524.1 GI:115482791 GeneID:4349041

Length

2682 bp

Definition

Oryza sativa Japonica Group Os10g0502000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:19605432..19608113

Sequence Coding Region

19605652..19605875,19605990..19606236,19607757..19607996

Expression

GEO Profiles:Os10g0502000

Genome Context

<gbrowseImage1> name=NC_008403:19605432..19608113 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:19605432..19608113 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcctccacctcttcctgcctcgcctcgccggccacggcggcggcggcgccccggctgcgggtgcgggtgacgccgagggcggggcgggtggtggcgtgctcggccgggggtggcggcgggccggaggcggcggggctgtttgccggtgagcgcaaggcggtgggcgggcttgcgtgcggcgtcctcgcggcctgggccgtcgcgtcctcgtccagccccgtgattgccgccagccagaggttgcctccactgtccacagagccaaacagatgcgagcgtgcttttgtcgggaacacaattggtcaggcaaatggggtgtatgacaagccactcgatctccggttttgcgattacacaaacgagaaaactaatctgaaaggaaaatctctagctgcagccttgatgtccgattcaaagtttgatggggccgacatgtctgaagttgtgatgtccaaagcttatgctgtgggggcaagcttcaaaggaacggatttcacaaatgcagtaatagaccgtgtcaattttgagaaggccgatctccaaggggcaatcttcaggaacaccgtcttgtcaggatcaaccttcgatgacgctaaaatgcaggacgtcgtgtttgaggacacgataatcggctacattgaccttcagaagctatgcaccaacacttccatcagcgcagactcaagattagagctgggctgcagatga</cdnaseq>

Protein Sequence

<aaseq>MASTSSCLASPATAAAAPRLRVRVTPRAGRVVACSAGGGGGPEA AGLFAGERKAVGGLACGVLAAWAVASSSSPVIAASQRLPPLSTEPNRCERAFVGNTIG QANGVYDKPLDLRFCDYTNEKTNLKGKSLAAALMSDSKFDGADMSEVVMSKAYAVGAS FKGTDFTNAVIDRVNFEKADLQGAIFRNTVLSGSTFDDAKMQDVVFEDTIIGYIDLQK LCTNTSISADSRLELGCR</aaseq>

Gene Sequence

<dnaseqindica>2239..2462#1878..2124#118..357#gaggcgcgcacacacaccagctctctctctctctctctctctctctctctctctctctctctctctctctctcttcgccgcagcgcagccaccctcacttgtcgcggccgcacggacatggcctccacctcttcctgcctcgcctcgccggccacggcggcggcggcgccccggctgcgggtgcgggtgacgccgagggcggggcgggtggtggcgtgctcggccgggggtggcggcgggccggaggcggcggggctgtttgccggtgagcgcaaggcggtgggcgggcttgcgtgcggcgtcctcgcggcctgggccgtcgcgtcctcgtccagccccgtgattgccgccagccaggttggtctccatggcattctattggggggtgtagtgatcttcctctggtggaataaatcccgcacgatcgtgacaacgggtgaacaaatacataggctagagttgcgcttggcaggaattgtgtgcttagaaagagaaatcacttgatttggagctgtttaattccctgtcaaatgcaatgagagttaccaaatcaagattgaccccagtatttcgctcaaattcgatagaagaaccaagtaataagggaaatgcatttagtttagctgacctaactgatcaaatcgagtaaccatccaatgttgctcttgattccttcttcaaatcccatcaaagaaaaatctgcttaaatttctccatgcaaaagataggcgggaccgctggagtgttgttagaatgtaggattttttttttgagtaaatttcacaaaactacagatactatgaccaaattatcacaaaactacagatttaactcgatgtatcacaaaactacacatttaacaccaaatttatcacaaaactacacatttaagatgaagtgtcacaaaactacatatttagtaactaaattatcacaaaactataggtttagaatcaatttaatcacaaagtaatgatgtttatagctccaccataacaatggtgctagggatttaaactctaaagttgtagttttgtgataagttcaatattgaatatgcatttttatgatacttcatctaaaatatgtagttttgtgataaatttggtgctaaatatgtagttttgtgatacaactccttaaatctgtagttttgtgataatttggtcaaaatacttgtagttttgtgaaatttactctttttttttcttaaaaagaatatgccttctgactaaaaatggtgttggagcttttagaatttgattaaatacttatgttgacaagatttaccaccgtctgaaatgtataattcttaaaaggtacccccttctttcctttttatatgactaaccaacgtcaaaaagaaaaaaaacagggcgtatgggttgacgagatttaccaatgtctgaaatttctgctgtcaactgttgcaacactgactgattgatatggtattctattatctgtggggggcaccctaattttggcaaatgctttctgtgcaatgtaaagcaagaaattcttatactgattactataccagtgcatgtgaaattgtgagttcagatttgagtgcacatataaatggtttttgtacatatctggagaattcactcaagaagtatgcagcgtattttgtatttctgatcacaaatttcatttaggaaacactgacatttttgctccagttgaactgcaaagtaaatggtatcctataggtatgacccaaatatatgcagtattatgtaagtcagtacaaatttacagtacatttgctcttctaaactcattctagcctcccagagttatttttcttttcttcaatggctttatgtcttcctaaaataacatcataccctgtttgctctggttgttagaggttgcctccactgtccacagagccaaacagatgcgagcgtgcttttgtcgggaacacaattggtcaggcaaatggggtgtatgacaagccactcgatctccggttttgcgattacacaaacgagaaaactaatctgaaaggaaaatctctagctgcagccttgatgtccgattcaaagtttgatggggccgacatgtctgaagttgtgatgtccaaagcttatgctgtgggggcaagcttcaaaggtaaactaactcaccttctgtcattcatcacactattgctgcattatttccaaaatcatgtacctttgaattgataaacagaacactagatgcttatatctcaattgttttcaggaacggatttcacaaatgcagtaatagaccgtgtcaattttgagaaggccgatctccaaggggcaatcttcaggaacaccgtcttgtcaggatcaaccttcgatgacgctaaaatgcaggacgtcgtgtttgaggacacgataatcggctacattgaccttcagaagctatgcaccaacacttccatcagcgcagactcaagattagagctgggctgcagatgatccacccaaattcccacctttctataaccgtttatgtcaatgttaacagtgtttcgatgattaagtcaagcctgtttatagagccgacatgaatccttttcttcgatatgtatctacaaacctctgcacaacttttcttccatatatgtagtatttacaaacctctgtacatcacacatattcggcatgcaatcaaatgcactacaagccacattttgac</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0502000, RefSeq:Os10g0502000