Os01g0706400

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Revision as of 04:56, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0706400| Description = Protein of unknown function DUF292, eukaryotic domain containing protein| Version = NM_001050551.1 GI:115439472 GeneI...")
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Gene Name

Os01g0706400

Description

Protein of unknown function DUF292, eukaryotic domain containing protein

Version

NM_001050551.1 GI:115439472 GeneID:4327673

Length

6064 bp

Definition

Oryza sativa Japonica Group Os01g0706400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:31062293..31068356

Sequence Coding Region

31062558..31062619,31062750..31062882,31063645..31063748,31064789..31064960,31065076..31065216
,31065295..31065643,31065721..31068065

Expression

GEO Profiles:Os01g0706400

Genome Context

<gbrowseImage1> name=NC_008394:31062293..31068356 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:31062293..31068356 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaacaggagcaaggcgaagctgtccggcgtcctgcacaagggcttcaagcccgacaagtgcaagacggcgctgcggatggcgctggcgcggatcaagctgctgaggaaccgcaaggaggtgcaggtgcggcagatgcgtcgagaggtcgcgcagctgctcgaggccgatcaggaccagaccgcacgcatcagggttgaacatgtcataagggaagagaagttcatgcaagcatatgacttaattgaagtatactgtgaacttatggtggcacgcatgtccattattgactcacagaagacttgccctattgatctgaaagaagccatagccagtgttatatttgcatcaatgaggtgttcagatgtcacagaacttgcagatgttcgcaagcatttcacaagtaagtatggaaaagagtttgcagcagcagctcttgaagtgcgacctgacagtggtgtcagccgactggtcattgagaagctgtcagctggagcacctgatacacagaccaaaatcaaaaccttgacctctattgcagaggagcacaacatcaaatgggagccaaaagcatttgaggagaaattgccgaagcaaaatgatgatcttctgcatgtgacctcaacatatccgggaggaaatattccaactaggggatcatctgcttctaattctggcatgccaacttcacagcctgctgcaccttctcattcatatatggaatcttccaattctcacatgtctacggcacattcatattcatcagctgaggttccagacaatagggctccatatgtcactgccaattctaatgctttcccccaagaaaacagaaggggttctgatgctccaatgtcccctaggtcccagcatggtcctaacagtttctctcatgatactgctggaggttcaaatgtttctagaccttactcccaatatggtgcaacagttccagatacagatacagcgtccaggagggaagagttcaatcactctagggagagaaaatcttcagttagtggttccaattggaatatagaattcaaggatgcaacatctgcagcacaagcagcagcagagtccgcagagatggctagtattgctgctagggctgctgcccaacttgctagtcgtggaaacctttctgcggagcaaaatactggagcttttgagtcacctgcttatacccatgaaactacacccaggaagcaacaagctgaacatttaatgaaggatgggcagaggagttctaatgagcagagttcaggggcttatgatccaagactcatctcaagtaatgatgctaggaaggatggggggagaacagaaacaagccgtgtaggtagtcagaatatgccaactaattccttgggtcaatccccaccatatagccctcatattcacagtgatgagtatgacatgccaactgatccgcatcgttctcattcacccgatcctcaatattctgatgattcatctgagaaagaaagcaactttggaagacctgaggatcatcagtttaatttacctggagaaagattgtccgaggctcaacttggtgggcacaacatcaaggacacggaaagcaagcatgctacctttgatcaagagaacacagacaactactacagcaactatagctcttcccatggtacattcacccatggcagcagtaccatttgggacagtcagaatgataaagctggacctgattcttcagctgttgtttttgatcaatatgattctgatgtcggagaagaaaatttattggatcctttctcttcaaagcacactgaagaacccactgttgaagatcacaagggattctcaagtgcagattggggtcaacagcatagaaatgaatctccagttaatcatagcagctcaacactattttcaggaacagaagcaaacagaaaagatgtttcctcacctcattcttatgataatgtgccacctacatttgactcggatggtgttagttctgatgaggaaatgaccacaggcatgcatgcaaggtctttaaggtctcattccagaggatccgatttttccgagagtagagaaaatataatttctggaaaggttgtccatgatgttaatgaaaatattgaagatcatgtatccatgtccaggaagaattaccttaattcatctggttctaatgcattcaataaggagcgctacagtgaaagttcacctagatctgattactcatgggttgatggggaattggatcgtacaaaaatcagagatcttgaagaagaaagagtgccacataaattggaaggtgcatcatcattgacaacaggagaaaataagaatcagctgttttctttaggcaggcaaacttcaacatcatctgctgactatgatgaaggcgatccaggcttgaactttggaaggctaactcctggactaagaaacaaactccggcaacctcctccgtacataaaggattctgggaatacctcgttgcataaggttcctaccgccattgaaaaatcagtgcactctgaagaggatacctcgtttggaaatacaagaaatacttctacaggtatggccaggagttcgttcggtgcagattacaacagtgaacttcatgaccaaaatcaaagtgttggagcaagtgtggaagctagatcaaccatgaggaattactatgggtcagaaggtgatagagggaagttatctgagcaatcttataatgctccaagttctgtgatgaataagagttctggaggtgtaaattccagtcaagatctgtaccatgaaaagccaggtgctggagcccgcaggggaactacaacaaaaactgccaaaagttactttgattcagatgatagcgaggacgaattggcacaacgcaaggaggtccagacaaagtggtctagagagcagattcaatcacgcaggactcagatgacatcagatacaaagaaagaaaccggtgtccgagttggagtgcagcatgctgatgaaactgaggcgaaatcacctgctgggtcattttctaggtttactgaacaaaggagagactcacctgtgtactccagggttccagtaccacgaacttcaccaaaacctgtgcgtgtggaacctcccttgggcaaagggaagtcacaagaagctgatctgaatacagtttctgtcacaggaaaggaggaaaacacagaaagcccagcagaaactccgaaagaaagcacctcaaaaactgctccgtcgcatgttcaccccaagcttccgacagactatgattcgtttgctgcacattttatgtctcttcggaccaatcgccgctag</cdnaseq>

Protein Sequence

<aaseq>MNRSKAKLSGVLHKGFKPDKCKTALRMALARIKLLRNRKEVQVR QMRREVAQLLEADQDQTARIRVEHVIREEKFMQAYDLIEVYCELMVARMSIIDSQKTC PIDLKEAIASVIFASMRCSDVTELADVRKHFTSKYGKEFAAAALEVRPDSGVSRLVIE KLSAGAPDTQTKIKTLTSIAEEHNIKWEPKAFEEKLPKQNDDLLHVTSTYPGGNIPTR GSSASNSGMPTSQPAAPSHSYMESSNSHMSTAHSYSSAEVPDNRAPYVTANSNAFPQE NRRGSDAPMSPRSQHGPNSFSHDTAGGSNVSRPYSQYGATVPDTDTASRREEFNHSRE RKSSVSGSNWNIEFKDATSAAQAAAESAEMASIAARAAAQLASRGNLSAEQNTGAFES PAYTHETTPRKQQAEHLMKDGQRSSNEQSSGAYDPRLISSNDARKDGGRTETSRVGSQ NMPTNSLGQSPPYSPHIHSDEYDMPTDPHRSHSPDPQYSDDSSEKESNFGRPEDHQFN LPGERLSEAQLGGHNIKDTESKHATFDQENTDNYYSNYSSSHGTFTHGSSTIWDSQND KAGPDSSAVVFDQYDSDVGEENLLDPFSSKHTEEPTVEDHKGFSSADWGQQHRNESPV NHSSSTLFSGTEANRKDVSSPHSYDNVPPTFDSDGVSSDEEMTTGMHARSLRSHSRGS DFSESRENIISGKVVHDVNENIEDHVSMSRKNYLNSSGSNAFNKERYSESSPRSDYSW VDGELDRTKIRDLEEERVPHKLEGASSLTTGENKNQLFSLGRQTSTSSADYDEGDPGL NFGRLTPGLRNKLRQPPPYIKDSGNTSLHKVPTAIEKSVHSEEDTSFGNTRNTSTGMA RSSFGADYNSELHDQNQSVGASVEARSTMRNYYGSEGDRGKLSEQSYNAPSSVMNKSS GGVNSSQDLYHEKPGAGARRGTTTKTAKSYFDSDDSEDELAQRKEVQTKWSREQIQSR RTQMTSDTKKETGVRVGVQHADETEAKSPAGSFSRFTEQRRDSPVYSRVPVPRTSPKP VRVEPPLGKGKSQEADLNTVSVTGKEENTESPAETPKESTSKTAPSHVHPKLPTDYDS FAAHFMSLRTNRR</aaseq>

Gene Sequence

<dnaseqindica>266..327#458..590#1353..1456#2497..2668#2784..2924#3003..3351#3429..5773#gttttcctatctcctctcttcctccctgcctagcgaaagtctccccccctctctccttggcctcttcctccctggtcggtagcgcagcacacgcatccgcgtgaacccatcctcctccctcctttccaatctacctgcaccaaccggagacgcccgcgcccagctacccctcgcctgccccccgcgcctcgcgggagccgattcgattcgaatctaggtacacagagaagcggaagcggcagcggcggcggcggcggaggcggagatgaacaggagcaaggcgaagctgtccggcgtcctgcacaagggcttcaagcccgacaagtggtcagtttgcccgcctgcccgagatcatctcgccctcgctaactctccgcgcgcgtttgtgtgcgccgcggaggcgcgtgcttgcaagggctaacagtttttttttttttgggtctcgtggatgccgcagcaagacggcgctgcggatggcgctggcgcggatcaagctgctgaggaaccgcaaggaggtgcaggtgcggcagatgcgtcgagaggtcgcgcagctgctcgaggccgatcaggaccagaccgcacgcatcagggtacgccttcccttgcctccgtctctatcgcggtctcaatttgtctctttagctcccccaattgatgacggaatcgggtaattggggtgccttgacgcggaatcagatgggctttggatgctagcatcaattgtttagccgcttgcgcttggtcttagtgtgccttaggtgtttatatgggaaaattttgttagttactagtagtagtgatgttttacgaatgatctgctcgctttggatatgccgatgaactactgcaattataagtggaattgccatagaagtccttgggcctgttggccctgtatatgcctgctggctcaaatgcaattcatttttatgtcttgacagaaaccatttacaattcgttctgtagcagtgccatcaatttggtcactgtattgacttgctccgttgaactcttgaattccatgagagtattggattcttatctgacaagtgtttggttttgcctctcggtagctacattacaacgaatgattcgttttttagttccatccatttgagtatttggtttttctttacttttacatgcctgcttgttgcgaatgcatgtgtcaagtattatcttgctgtgagtatattattagggcatcctgttgggttctgagccacagagtgaccagctacttgttagtgaatcaaagacgcacacacagtcctaacgtgtcttgatggtacttcctgaccaaaggctcatctattttctttttggcccgttttgcttatctttttccacaggttgaacatgtcataagggaagagaagttcatgcaagcatatgacttaattgaagtatactgtgaacttatggtggcacgcatgtccattattgactcacagaagtaagccattttcccctttattgtatataatgcatatagccaattacttgctggtctatttatgtttcttatgtcagaaattgcttcattatcatagataacagaagcatattttgttagttggaggactacctctaacatagcttatttcttgtcgatatgatttcttaagttgatactaaacaatttttttcatgttattagcaaccttcagattgtttcttatatcacaagagttacttttttcttataagcaaagcatgattttgcctgattgatatgggcctcctaaaactgcttataatcctggcatcctctttttttttcctcgtgagtgtaatctggaaactgaacccactttattttttttgtggcacagtcatatactacttagttacttgctggagataaatgtaaattccttatgtcttccaattgaaacttccctggttccagagtggaatgttttatggactcaattctgccatatcaagttagccttatttagctgagttcaattaagcttccattatctgaaaatatcaagttagcctagacatgagttttacgctccaagtattatttcatggtttcaaaggagctgaatcctcccatttactcattctcatcttaactaatcaaactattctaaaatagtctaattaagtcaagtgctaccaactctatggcaattggcacactcattttaagaaatacaaaataatagccactaagatgagtgcttctatgctttcttaaacgaaaactatacaaatcgattgtctaattataacatactaatgtccagggtgttagatgctcattgcatcttagttatctaggacctgtgctgtggcgcgaccttttaagataatgacaggaagaaaagagcttagataaaaaataaattgagattaatattgattgaaaactatgcattgttttggttttcttagttaatttattggttttatggtttctgttcccctggaactgatctgttctcttcctttccttgtttatgtggtttttacctgaaggacttgccctattgatctgaaagaagccatagccagtgttatatttgcatcaatgaggtgttcagatgtcacagaacttgcagatgttcgcaagcatttcacaagtaagtatggaaaagagtttgcagcagcagctcttgaagtgcgacctgacagtggtgtcagccgactggtaatttatgctgcttttagaagtattttgtatgggaaaataatttccttacttctgttggcctgaataaatatatgccatgattatagcttatgtttgtaataattggatacaggtcattgagaagctgtcagctggagcacctgatacacagaccaaaatcaaaaccttgacctctattgcagaggagcacaacatcaaatgggagccaaaagcatttgaggagaaattgccgaagcaaaatgatgatcttctggtaaattagctgacataaaagtttatttaagcgttcaagtattatggttctaactggattaatcatttgatgatttagcatgtgacctcaacatatccgggaggaaatattccaactaggggatcatctgcttctaattctggcatgccaacttcacagcctgctgcaccttctcattcatatatggaatcttccaattctcacatgtctacggcacattcatattcatcagctgaggttccagacaatagggctccatatgtcactgccaattctaatgctttcccccaagaaaacagaaggggttctgatgctccaatgtcccctaggtcccagcatggtcctaacagtttctctcatgatactgctggaggttcaaatgtttctagaccttactcccaatatggtgcaacagttccagatacaggtgaaggtcatataatctgaacattaccaattttttagtgctttcttgttcattcctagtttaaatgttattttcagatacagcgtccaggagggaagagttcaatcactctagggagagaaaatcttcagttagtggttccaattggaatatagaattcaaggatgcaacatctgcagcacaagcagcagcagagtccgcagagatggctagtattgctgctagggctgctgcccaacttgctagtcgtggaaacctttctgcggagcaaaatactggagcttttgagtcacctgcttatacccatgaaactacacccaggaagcaacaagctgaacatttaatgaaggatgggcagaggagttctaatgagcagagttcaggggcttatgatccaagactcatctcaagtaatgatgctaggaaggatggggggagaacagaaacaagccgtgtaggtagtcagaatatgccaactaattccttgggtcaatccccaccatatagccctcatattcacagtgatgagtatgacatgccaactgatccgcatcgttctcattcacccgatcctcaatattctgatgattcatctgagaaagaaagcaactttggaagacctgaggatcatcagtttaatttacctggagaaagattgtccgaggctcaacttggtgggcacaacatcaaggacacggaaagcaagcatgctacctttgatcaagagaacacagacaactactacagcaactatagctcttcccatggtacattcacccatggcagcagtaccatttgggacagtcagaatgataaagctggacctgattcttcagctgttgtttttgatcaatatgattctgatgtcggagaagaaaatttattggatcctttctcttcaaagcacactgaagaacccactgttgaagatcacaagggattctcaagtgcagattggggtcaacagcatagaaatgaatctccagttaatcatagcagctcaacactattttcaggaacagaagcaaacagaaaagatgtttcctcacctcattcttatgataatgtgccacctacatttgactcggatggtgttagttctgatgaggaaatgaccacaggcatgcatgcaaggtctttaaggtctcattccagaggatccgatttttccgagagtagagaaaatataatttctggaaaggttgtccatgatgttaatgaaaatattgaagatcatgtatccatgtccaggaagaattaccttaattcatctggttctaatgcattcaataaggagcgctacagtgaaagttcacctagatctgattactcatgggttgatggggaattggatcgtacaaaaatcagagatcttgaagaagaaagagtgccacataaattggaaggtgcatcatcattgacaacaggagaaaataagaatcagctgttttctttaggcaggcaaacttcaacatcatctgctgactatgatgaaggcgatccaggcttgaactttggaaggctaactcctggactaagaaacaaactccggcaacctcctccgtacataaaggattctgggaatacctcgttgcataaggttcctaccgccattgaaaaatcagtgcactctgaagaggatacctcgtttggaaatacaagaaatacttctacaggtatggccaggagttcgttcggtgcagattacaacagtgaacttcatgaccaaaatcaaagtgttggagcaagtgtggaagctagatcaaccatgaggaattactatgggtcagaaggtgatagagggaagttatctgagcaatcttataatgctccaagttctgtgatgaataagagttctggaggtgtaaattccagtcaagatctgtaccatgaaaagccaggtgctggagcccgcaggggaactacaacaaaaactgccaaaagttactttgattcagatgatagcgaggacgaattggcacaacgcaaggaggtccagacaaagtggtctagagagcagattcaatcacgcaggactcagatgacatcagatacaaagaaagaaaccggtgtccgagttggagtgcagcatgctgatgaaactgaggcgaaatcacctgctgggtcattttctaggtttactgaacaaaggagagactcacctgtgtactccagggttccagtaccacgaacttcaccaaaacctgtgcgtgtggaacctcccttgggcaaagggaagtcacaagaagctgatctgaatacagtttctgtcacaggaaaggaggaaaacacagaaagcccagcagaaactccgaaagaaagcacctcaaaaactgctccgtcgcatgttcaccccaagcttccgacagactatgattcgtttgctgcacattttatgtctcttcggaccaatcgccgctagttttatgatcgcataccagttgagttttacatgtgaagaagtcgtatttacaaacacagggatacatacattctatagcttcgagttgacatttgtacagtatatcaactcatagcactcggtcttatatgttggtctttttggcgagctattattctttcgttctattttggcctcatgttcatcacatcttaggtattgtcattatgaaaggattgttagcgtgtaataagcacattatgcagtcagatgtacagacgtttacagaacttaagaggtttaccttttttc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0706400, RefSeq:Os01g0706400