Os01g0706700

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Revision as of 04:56, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0706700| Description = Protein of unknown function DUF590 family protein| Version = NM_001050553.1 GI:115439476 GeneID:4327675| Length = 43...")
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Gene Name

Os01g0706700

Description

Protein of unknown function DUF590 family protein

Version

NM_001050553.1 GI:115439476 GeneID:4327675

Length

4365 bp

Definition

Oryza sativa Japonica Group Os01g0706700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:31074040..31078404

Sequence Coding Region

31074337..31074447,31074546..31074704,31074796..31074903,31075037..31075119,31075205..31075335
,31075421..31075490,31075573..31075687,31075758..31075890,31076071..31076337
,31076453..31076557,31076641..31076732,31076851..31076951,31077014..31077140
,31077613..31077728,31077810..31077879,31078064..31078273

Expression

GEO Profiles:Os01g0706700

Genome Context

<gbrowseImage1> name=NC_008394:31074040..31078404 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:31074040..31078404 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagggaagggggagcgggcgaggggcagggcgcggccgtggatgaggcgacggggttcgaggtcgggatcgtcgtgcccaagctctaccgcggcgctgcggccgggtgcggcgaggtcgagaactgcgtggcgcggctggtgcgggagctggaggacgtagggctgatcgtcgagcgcgtccgcggcgtccccgcggagttcatcaagctgtctgcgcccatggggaccctggggagagttgcagcggagatgaacatgaagaagctaacttatatcggaatggaactgcagtttgaatgggaccaggttggagcattcgtcaggcagcccgacgggtccctgtttagctggcgagagcggtttgcctgcttccggcacttgatatacagcatcgtgaacaagaccgattctgatataactctcagctttgacgataaagagttccactggactcaaaatgagtcactcttaaccaggctggaagatgaaggaatcgtaaagctagtcttccctttgcatgatgaaattaaaaggaagcaactcctgagaagctgggcactcaagtggtttgatttcacatggcaacctattgatgaaatttactcttactttggaacaaagattgcaatatatttttctttcctcggaatgtatacacgttggctgttctttccagctgtttttggacttgcaacccagctgatagattttgggtcattacagtggttggttcttccagctttctttttcttcgttatttcttgggctgtcttctttttgcaattttggaaacggaagaattcagctgtccttgctagatggggtataaattattcattttcggaatacaaaactatgggcaatgaactggaccctttaagcttttctatggctgatgacaatgttcagcagaggaaatttggtgctcccaaggagaaaagtatagtacaaagaaatgagtggtttggtgttctccttagaattaggaataatgctatcattgttttggctatcatttgtcttcagctgccatttgagttggcctatgctcatctatatgcgattacaaaaactgaggcgctaaggtatgtgttaactgcagtgtatcttgctgcaattcagtattacacaaggataggtggcaaggtgtctgtcactctaataaagtatgaaaacaaccaaggggaacagtctagtgctgatagtttggtttataaggtctttggtctttactttatgcaatcatatattggattgttttaccatgcttcactgcaccgcaacattatggcactccggcaagtcctaatcaagcgtctcattgtgtcccaggtattggaaaatctgattgagaattccattccttacctcaattatagctataaaaagtatagagctgttcacaagaaaaaacatgagaaagaatcgccagctgggaagtcagttcggttatctacaagagtagagaaagaatatctaaaaccctcgtatactgcaagcattggagaagaacttgaagatggtttatttgatgattttcttgagctaactcttcagtttgggatgatcatgatgtttgcttgtgcatttccgtcgatattctgctttgctgctctgaataatgtgactgaaattagagcggatgcattgaagttgttggtcatgttgaaaagacctgctccccgtgatgcagctacgattggagcttggctgaacatattccagttcttggttgttatggcaatctgtacaaactgcttgcttcttgtttgtctgtatgatgaggagggtaaatggaaaattgagccaggactggcagccatcctcataatggagcatgctctcttcttaatcaagtttggtttctcacactttgttcccgaggaacctgcatgggtgaaagcaaatcgtgggcgatatgtagctcaggcgcagaatgtctgctccaaacaactcctgagaagcattgcaaaactggatgcgaaattggagtga</cdnaseq>

Protein Sequence

<aaseq>MREGGAGEGQGAAVDEATGFEVGIVVPKLYRGAAAGCGEVENCV ARLVRELEDVGLIVERVRGVPAEFIKLSAPMGTLGRVAAEMNMKKLTYIGMELQFEWD QVGAFVRQPDGSLFSWRERFACFRHLIYSIVNKTDSDITLSFDDKEFHWTQNESLLTR LEDEGIVKLVFPLHDEIKRKQLLRSWALKWFDFTWQPIDEIYSYFGTKIAIYFSFLGM YTRWLFFPAVFGLATQLIDFGSLQWLVLPAFFFFVISWAVFFLQFWKRKNSAVLARWG INYSFSEYKTMGNELDPLSFSMADDNVQQRKFGAPKEKSIVQRNEWFGVLLRIRNNAI IVLAIICLQLPFELAYAHLYAITKTEALRYVLTAVYLAAIQYYTRIGGKVSVTLIKYE NNQGEQSSADSLVYKVFGLYFMQSYIGLFYHASLHRNIMALRQVLIKRLIVSQVLENL IENSIPYLNYSYKKYRAVHKKKHEKESPAGKSVRLSTRVEKEYLKPSYTASIGEELED GLFDDFLELTLQFGMIMMFACAFPSIFCFAALNNVTEIRADALKLLVMLKRPAPRDAA TIGAWLNIFQFLVVMAICTNCLLLVCLYDEEGKWKIEPGLAAILIMEHALFLIKFGFS HFVPEEPAWVKANRGRYVAQAQNVCSKQLLRSIAKLDAKLE</aaseq>

Gene Sequence

<dnaseqindica>3958..4068#3701..3859#3502..3609#3286..3368#3070..3200#2915..2984#2718..2832#2515..2647#2068..2334#1848..1952#1673..1764#1454..1554#1265..1391#677..792#526..595#132..341#attctcatttcccaaagaccgcaaaaaaattttccttccatcgctcgccgcatttccctttccccctatgcggatccgctcccttgcatccaccgccattccccgcgtctgatccgtcgtcgttgtggaggatgagggaagggggagcgggcgaggggcagggcgcggccgtggatgaggcgacggggttcgaggtcgggatcgtcgtgcccaagctctaccgcggcgctgcggccgggtgcggcgaggtcgagaactgcgtggcgcggctggtgcgggagctggaggacgtagggctgatcgtcgagcgcgtccgcggcgtccccgcggagttcatcaaggtccggtgtttttttttcttttattattatattttgaattccgccgtttggcacggtggcctgattttgaatttctgagacgaggaggcgattaggggaaagggagcactacacttcgctataatcatgtggcgagaaaccatgagcttgttgtaatgtttgtggatttgcattttgaattcagctgtctgcgcccatggggaccctggggagagttgcagcggagatgaacatgaagaagctaacttatatcggtaactgatctaatccacctgtgagtatttcagaatgggtgatttgatgatgtgttcatggtttatttctctgcttgtcaggaatggaactgcagtttgaatgggaccaggttggagcattcgtcaggcagcccgacgggtccctgtttagctggcgagagcggtttgcctgcttccggcacttgatatacagcatcgtaagtgcacagttgtctcccattgtagttgcttttgttcctgttacccacttcggcacattgtagttatagttatttatgtttggagattccacactaagttggcatttttctagaccagcactgcttcgttgttagtaccggtatttcacggatggcatgtatgtcctgcctggcttttgcaaaattgattttttttttgcagcactgctgattcaaagatttaagtatagttcattatgcatcagatgacctgtctattatatttgcatttaagaaacaagccaagtgcaaataggaaagtggtttagtatatttctgcttatactatggttattctctcaagtctcaaagtttttcttttcgcttgacatgagatatgaataaaacatatagctaatgtacaaagtgattagtcttgttgtgcttcatatttccttatttgacagtaggtagatatggagacttgcaggtgaacaagaccgattctgatataactctcagctttgacgataaagagttccactggactcaaaatgagtcactcttaaccaggctggaagatgaaggaatcgtaaagctagtcttccctttgcatggtaaaccaacctgaattatttttgaaattcttagtattagataaccaactgttttgctgcagatgaaattaaaaggaagcaactcctgagaagctgggcactcaagtggtttgatttcacatggcaacctattgatgaaatttactcttactttggaacaaaggtagaccagcgtgattgcacatgttacacctaccatatttaatttatgaactattctatctgaagcaaatcaagtatcaccttattctactccataaaatttaattctggaattgcagattgcaatatatttttctttcctcggaatgtatacacgttggctgttctttccagctgtttttggacttgcaacccagctgatagattttgggtatgcacctctcatctagaaaatatcattgggattttattgttgtcgtcagctaaatgtttttctctgctgtctgaattcaggtcattacagtggttggttcttccagctttctttttcttcgttatttcttgggctgtcttctttttgcaattttggaaacggaagaattcagctgtccttgctaggtagcatgcaattttctatgcaatctgtatatatctaagtcaattaagttcctttgaaacatattcaagaccgtgctcacaaacatgcctttcttttatgtgatgttttcaacagatggggtataaattattcattttcggaatacaaaactatgggcaatgaactggaccctttaagcttttctatggctgatgacaatgttcagcagaggaaatttggtgctcccaaggagaaaagtatagtacaaagaaatgagtggtttggtgttctccttagaattaggaataatgctatcattgttttggctatcatttgtcttcagctgccatttgagttggcctatgctcatctatatgcgattacaaaaactgaggcgctaaggtaagattgtaggaatatcactatgatctattcatgattcttgagttatcaacgatgtgcaattgacctgaagcttattttctcctaattgttttatatctattccttatgttttattttgttgtttatggttaccactaaaatatgaagcatcagttcttattgctgatgtttatgcaggtatgtgttaactgcagtgtatcttgctgcaattcagtattacacaaggataggtggcaaggtgtctgtcactctaataaagtatgaaaacaaccaaggggaacagtctagtgctgatagtttggtttataaggtaaacacaatgatgccaagaatatggttcacgctttatgttaggtttcttactcttttggcaaatgcaggtctttggtctttactttatgcaatcatatattggattgttttaccatgcttcactgcaccgcaacattatggcactccggcaagtcctaatcaagcgtctcattgtgtcccaggcatgtctgcattgtaattattccatcattagttataatcataaatgctagtcttcctttgatgatacatattaacttgcaggtattggaaaatctgattgagaattccattccttacctcaattatagctataaaaagtatagagctgttcagtaagttctgcagccaaatctgtttgtcctactattctttttccagaccaattcagagatgtaagaaatctcttccatcttgtagcaagaaaaaacatgagaaagaatcgccagctgggaagtcagttcggttatctacaagagtagagaaagaatatctaaaaccctcgtatactgcaagcattggagaagaacttgaagatggtttatttgatggtaacagcaataaataatcatcctgtctattctcagttcttttggatgtctgtgttatgttcttacattgttgagtccatcacagattttcttgagctaactcttcagtttgggatgatcatgatgtttgcttgtgcatttccgtcgatattctgctttgctgctctggtatgtggttcatcacagctatttgtgttctctctcttcttgtgtccttccctcttgtcgagcgcatgccatacatgtgtgttcttgtttgatttgtgtgtgctaaacttatcttaaattattttcatgacagaataatgtgactgaaattagagcggatgcattgaagttgttggtcatgttgaaaagacctgctccccgtgatgcagctacgattggagcttggctgaacatattccaggttcattagcagtttttttaatatatattcctcatagatatacttgcatgtctcatgccttgtaatactcaatgtgaaaaattcttttcagttcttggttgttatggcaatctgtacaaactgcttgcttcttgtttgtctgtatgatgaggagggtaaatggaaaattgagccaggactggcagccatcctcataatggagcatgctctcttcttaatcaagtttggtttctcacactttgttcccgaggtgattttctattctttatgtgttatctttgtgtttttactgatctctatatagctaaagcacctaaatgtggtttcttgacttaatttgtcaaataggaacctgcatgggtgaaagcaaatcgtgggcgatatgtagctcaggcgcagaatgtctgctccaaacaactcctgagaagcattgcaaaactggatgcgaaattggagtgaggtatccaggttttatataaggcggcagtagttttgtagattaggatagtgcacaaatgtgtcttgtgcgagcacgtacaaattgtaggtaggtaacatcgtgcaaccactaactgttccaattggtaaatgtagatgtcgctatataatttataaggtcctgcaagactgcaacatcaatgtaagaatgcaagggtgttcctttccttctaactatatatatttgttgagttgaactggggatgtatccccccatgtatgtgctgtgtattatctgaaattagaatagatttcact</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0706700, RefSeq:Os01g0706700